EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000004060 (Gene tree)
Gene ID: -
Gene Symbol: imp3
Alias: zgc:56526
Full Name: U3 small nucleolar ribonucleoprotein protein IMP3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9290 bases
Position: chrJH422283.1:8430990-8440279
Accession: 102792844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005107	S4	PF01479.25	2.4e-09	1	1
ENSNBRP00000005098	S4	PF01479.25	2.2e-08	1	1
ENSNBRP00000005098	Ribosomal_S4	PF00163.19	5.5e-09	1	1
ENSNBRP00000005107	Ribosomal_S4	PF00163.19	5.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005253	-	2007	-	ENSNBRP00000005098	187 (aa)	-	-
ENSNBRT00000005262	-	1748	XM_006786830	ENSNBRP00000005107	183 (aa)	XP_006786893	UPI0003EC5F12

Gene Model

Click here to download ENSNBRG00000004060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004060	imp3	100	92.350	ENSAPOG00000014720	imp3	100	92.350	Acanthochromis_polyacanthus
ENSNBRG00000004060	imp3	100	71.196	ENSAMEG00000019247	IMP3	100	71.196	Ailuropoda_melanoleuca
ENSNBRG00000004060	imp3	98	95.531	ENSACIG00000022070	imp3	96	95.531	Amphilophus_citrinellus
ENSNBRG00000004060	imp3	100	91.803	ENSAOCG00000015761	imp3	100	91.803	Amphiprion_ocellaris
ENSNBRG00000004060	imp3	100	91.257	ENSAPEG00000005250	imp3	100	91.257	Amphiprion_percula
ENSNBRG00000004060	imp3	100	95.628	ENSATEG00000020021	imp3	100	95.628	Anabas_testudineus
ENSNBRG00000004060	imp3	100	65.775	ENSACAG00000016259	IMP3	100	65.775	Anolis_carolinensis
ENSNBRG00000004060	imp3	100	70.109	ENSANAG00000016669	-	100	70.109	Aotus_nancymaae
ENSNBRG00000004060	imp3	99	59.890	ENSANAG00000036874	-	99	59.890	Aotus_nancymaae
ENSNBRG00000004060	imp3	100	98.907	ENSACLG00000009929	imp3	100	98.907	Astatotilapia_calliptera
ENSNBRG00000004060	imp3	96	85.714	ENSAMXG00000018715	imp3	99	85.714	Astyanax_mexicanus
ENSNBRG00000004060	imp3	99	53.297	WBGene00016740	C48B6.2	99	53.297	Caenorhabditis_elegans
ENSNBRG00000004060	imp3	100	70.109	ENSCJAG00000044585	IMP3	100	70.109	Callithrix_jacchus
ENSNBRG00000004060	imp3	100	68.478	ENSCAFG00000018039	IMP3	82	68.478	Canis_familiaris
ENSNBRG00000004060	imp3	100	68.478	ENSCAFG00020003760	-	100	68.478	Canis_lupus_dingo
ENSNBRG00000004060	imp3	100	55.978	ENSCAFG00020006737	-	100	56.522	Canis_lupus_dingo
ENSNBRG00000004060	imp3	100	70.652	ENSCHIG00000006295	IMP3	100	70.652	Capra_hircus
ENSNBRG00000004060	imp3	100	70.652	ENSTSYG00000005503	IMP3	100	70.652	Carlito_syrichta
ENSNBRG00000004060	imp3	100	71.196	ENSCPOG00000012016	IMP3	100	71.196	Cavia_porcellus
ENSNBRG00000004060	imp3	100	70.109	ENSCCAG00000002712	-	100	70.109	Cebus_capucinus
ENSNBRG00000004060	imp3	98	61.111	ENSCCAG00000023378	-	99	60.345	Cebus_capucinus
ENSNBRG00000004060	imp3	100	70.652	ENSCATG00000015188	IMP3	100	70.652	Cercocebus_atys
ENSNBRG00000004060	imp3	100	70.652	ENSCSAG00000019732	IMP3	100	70.652	Chlorocebus_sabaeus
ENSNBRG00000004060	imp3	100	71.196	ENSCHOG00000012046	IMP3	100	71.196	Choloepus_hoffmanni
ENSNBRG00000004060	imp3	100	64.865	ENSCPBG00000021662	IMP3	100	64.865	Chrysemys_picta_bellii
ENSNBRG00000004060	imp3	99	66.298	ENSCING00000004233	-	100	66.298	Ciona_intestinalis
ENSNBRG00000004060	imp3	99	67.956	ENSCSAVG00000000698	-	100	67.956	Ciona_savignyi
ENSNBRG00000004060	imp3	100	70.652	ENSCANG00000018342	IMP3	100	70.652	Colobus_angolensis_palliatus
ENSNBRG00000004060	imp3	100	69.565	ENSCGRG00001001326	Imp3	100	69.565	Cricetulus_griseus_chok1gshd
ENSNBRG00000004060	imp3	100	69.565	ENSCGRG00000018907	Imp3	100	69.565	Cricetulus_griseus_crigri
ENSNBRG00000004060	imp3	99	91.209	ENSCSEG00000017200	imp3	99	91.209	Cynoglossus_semilaevis
ENSNBRG00000004060	imp3	100	82.105	ENSCVAG00000019511	imp3	100	82.105	Cyprinodon_variegatus
ENSNBRG00000004060	imp3	100	85.246	ENSDARG00000115266	imp3	100	85.246	Danio_rerio
ENSNBRG00000004060	imp3	100	70.109	ENSDNOG00000015787	IMP3	81	70.109	Dasypus_novemcinctus
ENSNBRG00000004060	imp3	100	69.022	ENSDORG00000029301	Imp3	100	69.022	Dipodomys_ordii
ENSNBRG00000004060	imp3	99	61.326	FBgn0034232	CG4866	100	61.326	Drosophila_melanogaster
ENSNBRG00000004060	imp3	100	71.739	ENSETEG00000004278	IMP3	100	71.739	Echinops_telfairi
ENSNBRG00000004060	imp3	99	73.481	ENSEBUG00000002343	imp3	99	73.481	Eptatretus_burgeri
ENSNBRG00000004060	imp3	100	70.109	ENSEASG00005015693	IMP3	100	70.109	Equus_asinus_asinus
ENSNBRG00000004060	imp3	100	70.652	ENSECAG00000015786	IMP3	100	70.652	Equus_caballus
ENSNBRG00000004060	imp3	100	87.432	ENSELUG00000023264	imp3	100	87.432	Esox_lucius
ENSNBRG00000004060	imp3	100	70.652	ENSFCAG00000040328	IMP3	100	70.652	Felis_catus
ENSNBRG00000004060	imp3	71	55.725	ENSFALG00000014811	IMP3	99	58.015	Ficedula_albicollis
ENSNBRG00000004060	imp3	100	71.196	ENSFDAG00000018422	IMP3	100	71.196	Fukomys_damarensis
ENSNBRG00000004060	imp3	100	91.803	ENSFHEG00000016954	imp3	100	91.803	Fundulus_heteroclitus
ENSNBRG00000004060	imp3	100	87.432	ENSGMOG00000018162	imp3	100	87.432	Gadus_morhua
ENSNBRG00000004060	imp3	100	56.216	ENSGALG00000040238	IMP3	100	57.838	Gallus_gallus
ENSNBRG00000004060	imp3	100	94.536	ENSGAFG00000007425	imp3	100	94.536	Gambusia_affinis
ENSNBRG00000004060	imp3	100	90.164	ENSGACG00000015998	imp3	100	90.164	Gasterosteus_aculeatus
ENSNBRG00000004060	imp3	100	63.784	ENSGAGG00000008163	IMP3	100	63.784	Gopherus_agassizii
ENSNBRG00000004060	imp3	100	70.652	ENSGGOG00000025122	IMP3	100	70.652	Gorilla_gorilla
ENSNBRG00000004060	imp3	100	99.454	ENSHBUG00000018453	imp3	100	99.454	Haplochromis_burtoni
ENSNBRG00000004060	imp3	100	70.652	ENSHGLG00000019824	IMP3	100	70.652	Heterocephalus_glaber_female
ENSNBRG00000004060	imp3	100	70.652	ENSHGLG00100020660	IMP3	100	70.652	Heterocephalus_glaber_male
ENSNBRG00000004060	imp3	100	91.803	ENSHCOG00000020565	imp3	100	91.803	Hippocampus_comes
ENSNBRG00000004060	imp3	100	84.699	ENSIPUG00000013142	imp3	100	84.699	Ictalurus_punctatus
ENSNBRG00000004060	imp3	100	71.196	ENSSTOG00000030143	IMP3	100	71.196	Ictidomys_tridecemlineatus
ENSNBRG00000004060	imp3	100	92.350	ENSKMAG00000001956	imp3	100	92.350	Kryptolebias_marmoratus
ENSNBRG00000004060	imp3	100	91.803	ENSLBEG00000008178	imp3	100	91.803	Labrus_bergylta
ENSNBRG00000004060	imp3	100	83.060	ENSLACG00000022148	imp3	100	83.060	Latimeria_chalumnae
ENSNBRG00000004060	imp3	100	85.246	ENSLOCG00000010237	imp3	100	85.246	Lepisosteus_oculatus
ENSNBRG00000004060	imp3	99	70.330	ENSLAFG00000004425	IMP3	99	70.330	Loxodonta_africana
ENSNBRG00000004060	imp3	100	70.652	ENSMFAG00000008867	IMP3	100	70.652	Macaca_fascicularis
ENSNBRG00000004060	imp3	100	70.652	ENSMMUG00000016103	IMP3	100	70.652	Macaca_mulatta
ENSNBRG00000004060	imp3	100	70.652	ENSMNEG00000026328	IMP3	100	70.652	Macaca_nemestrina
ENSNBRG00000004060	imp3	100	94.536	ENSMAMG00000003215	imp3	100	94.536	Mastacembelus_armatus
ENSNBRG00000004060	imp3	100	98.930	ENSMZEG00005005544	imp3	100	98.930	Maylandia_zebra
ENSNBRG00000004060	imp3	100	70.109	ENSMAUG00000010279	Imp3	100	70.109	Mesocricetus_auratus
ENSNBRG00000004060	imp3	100	70.652	ENSMICG00000044149	IMP3	100	70.652	Microcebus_murinus
ENSNBRG00000004060	imp3	100	70.652	ENSMOCG00000008647	Imp3	100	70.652	Microtus_ochrogaster
ENSNBRG00000004060	imp3	96	94.286	ENSMMOG00000018117	imp3	84	94.286	Mola_mola
ENSNBRG00000004060	imp3	100	69.565	ENSMODG00000025193	IMP3	100	69.565	Monodelphis_domestica
ENSNBRG00000004060	imp3	100	94.536	ENSMALG00000006505	imp3	100	94.536	Monopterus_albus
ENSNBRG00000004060	imp3	100	69.565	MGP_CAROLIEiJ_G0032258	Imp3	100	69.565	Mus_caroli
ENSNBRG00000004060	imp3	100	69.565	ENSMUSG00000032288	Imp3	100	69.565	Mus_musculus
ENSNBRG00000004060	imp3	100	69.565	MGP_PahariEiJ_G0015125	Imp3	100	69.565	Mus_pahari
ENSNBRG00000004060	imp3	100	69.565	MGP_SPRETEiJ_G0033398	Imp3	100	69.565	Mus_spretus
ENSNBRG00000004060	imp3	100	70.109	ENSMPUG00000020147	IMP3	100	70.109	Mustela_putorius_furo
ENSNBRG00000004060	imp3	100	70.652	ENSMLUG00000014032	IMP3	100	70.652	Myotis_lucifugus
ENSNBRG00000004060	imp3	100	69.022	ENSNGAG00000017248	Imp3	100	69.022	Nannospalax_galili
ENSNBRG00000004060	imp3	100	70.652	ENSOPRG00000015906	-	100	70.652	Ochotona_princeps
ENSNBRG00000004060	imp3	100	71.196	ENSODEG00000020194	IMP3	100	71.196	Octodon_degus
ENSNBRG00000004060	imp3	100	97.814	ENSONIG00000010661	imp3	100	97.814	Oreochromis_niloticus
ENSNBRG00000004060	imp3	100	70.652	ENSOCUG00000004690	IMP3	100	70.652	Oryctolagus_cuniculus
ENSNBRG00000004060	imp3	100	91.257	ENSORLG00000004484	imp3	100	91.257	Oryzias_latipes
ENSNBRG00000004060	imp3	100	91.257	ENSORLG00020003771	imp3	100	91.257	Oryzias_latipes_hni
ENSNBRG00000004060	imp3	100	90.710	ENSORLG00015006933	imp3	100	90.710	Oryzias_latipes_hsok
ENSNBRG00000004060	imp3	100	92.350	ENSOMEG00000016160	imp3	100	92.350	Oryzias_melastigma
ENSNBRG00000004060	imp3	100	70.652	ENSOGAG00000004917	IMP3	100	70.652	Otolemur_garnettii
ENSNBRG00000004060	imp3	100	70.652	ENSPPAG00000009241	IMP3	100	70.652	Pan_paniscus
ENSNBRG00000004060	imp3	100	70.652	ENSPPRG00000018701	IMP3	100	70.652	Panthera_pardus
ENSNBRG00000004060	imp3	100	70.652	ENSPTRG00000052235	IMP3	100	70.652	Pan_troglodytes
ENSNBRG00000004060	imp3	100	70.652	ENSPANG00000013668	IMP3	100	70.652	Papio_anubis
ENSNBRG00000004060	imp3	100	87.432	ENSPKIG00000007169	imp3	100	87.432	Paramormyrops_kingsleyae
ENSNBRG00000004060	imp3	100	79.570	ENSPMGG00000009379	imp3	100	79.570	Periophthalmus_magnuspinnatus
ENSNBRG00000004060	imp3	100	69.565	ENSPEMG00000013003	Imp3	100	69.565	Peromyscus_maniculatus_bairdii
ENSNBRG00000004060	imp3	100	93.989	ENSPFOG00000016529	imp3	100	93.989	Poecilia_formosa
ENSNBRG00000004060	imp3	100	94.536	ENSPLAG00000013831	imp3	100	94.536	Poecilia_latipinna
ENSNBRG00000004060	imp3	100	93.443	ENSPMEG00000000797	imp3	100	93.443	Poecilia_mexicana
ENSNBRG00000004060	imp3	100	94.536	ENSPREG00000006885	imp3	100	94.536	Poecilia_reticulata
ENSNBRG00000004060	imp3	100	71.196	ENSPPYG00000006664	IMP3	100	71.196	Pongo_abelii
ENSNBRG00000004060	imp3	99	70.879	ENSPCAG00000006920	IMP3	99	70.879	Procavia_capensis
ENSNBRG00000004060	imp3	100	70.652	ENSPCOG00000012367	IMP3	100	70.652	Propithecus_coquereli
ENSNBRG00000004060	imp3	100	71.196	ENSPVAG00000010036	IMP3	100	71.196	Pteropus_vampyrus
ENSNBRG00000004060	imp3	100	98.907	ENSPNYG00000000324	imp3	100	98.907	Pundamilia_nyererei
ENSNBRG00000004060	imp3	100	90.710	ENSPNAG00000017113	imp3	100	90.710	Pygocentrus_nattereri
ENSNBRG00000004060	imp3	100	69.565	ENSRNOG00000017460	Imp3	100	69.565	Rattus_norvegicus
ENSNBRG00000004060	imp3	100	71.196	ENSRBIG00000024522	IMP3	100	71.196	Rhinopithecus_bieti
ENSNBRG00000004060	imp3	100	71.196	ENSRROG00000024157	IMP3	100	71.196	Rhinopithecus_roxellana
ENSNBRG00000004060	imp3	99	54.945	YHR148W	-	99	54.945	Saccharomyces_cerevisiae
ENSNBRG00000004060	imp3	100	70.109	ENSSBOG00000006542	-	100	70.109	Saimiri_boliviensis_boliviensis
ENSNBRG00000004060	imp3	99	61.538	ENSSBOG00000026404	-	99	61.538	Saimiri_boliviensis_boliviensis
ENSNBRG00000004060	imp3	99	67.033	ENSSHAG00000006200	IMP3	99	67.033	Sarcophilus_harrisii
ENSNBRG00000004060	imp3	100	87.432	ENSSFOG00015012483	imp3	100	87.432	Scleropages_formosus
ENSNBRG00000004060	imp3	100	94.536	ENSSMAG00000007865	imp3	100	94.536	Scophthalmus_maximus
ENSNBRG00000004060	imp3	100	94.536	ENSSDUG00000010594	imp3	100	94.536	Seriola_dumerili
ENSNBRG00000004060	imp3	100	94.536	ENSSLDG00000015587	imp3	100	94.536	Seriola_lalandi_dorsalis
ENSNBRG00000004060	imp3	100	71.196	ENSSARG00000009657	IMP3	100	71.196	Sorex_araneus
ENSNBRG00000004060	imp3	100	92.896	ENSSPAG00000002088	imp3	100	92.896	Stegastes_partitus
ENSNBRG00000004060	imp3	100	56.216	ENSTGUG00000013228	IMP3	100	57.838	Taeniopygia_guttata
ENSNBRG00000004060	imp3	99	90.659	ENSTRUG00000025783	imp3	99	90.659	Takifugu_rubripes
ENSNBRG00000004060	imp3	100	71.196	ENSUAMG00000022724	IMP3	100	71.196	Ursus_americanus
ENSNBRG00000004060	imp3	100	71.196	ENSUMAG00000003736	IMP3	100	71.196	Ursus_maritimus
ENSNBRG00000004060	imp3	100	69.022	ENSVVUG00000019589	IMP3	100	69.022	Vulpes_vulpes
ENSNBRG00000004060	imp3	96	95.429	ENSXCOG00000007392	imp3	96	95.429	Xiphophorus_couchianus
ENSNBRG00000004060	imp3	100	95.082	ENSXMAG00000023049	imp3	100	95.082	Xiphophorus_maculatus