EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004078 (Gene tree)
Gene ID: 102792479
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like protein 13B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 11078 bases
Position: chrJH422298.1:1106952-1118029
Accession: 102792479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005162	MMR_HSR1	PF01926.23	7.2e-06	1	1
ENSNBRP00000005176	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005338	-	171	-	ENSNBRP00000005181	56 (aa)	-	-
ENSNBRT00000005319	-	750	-	ENSNBRP00000005162	249 (aa)	-	-
ENSNBRT00000005333	-	1116	XM_006792779	ENSNBRP00000005176	371 (aa)	XP_006792842	-

Gene Model

Click here to download ENSNBRG00000004078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004078	arl13b	71	33.333	ENSNBRG00000004364	-	89	33.333
ENSNBRG00000004078	arl13b	70	32.571	ENSNBRG00000011196	-	92	32.571
ENSNBRG00000004078	arl13b	65	33.333	ENSNBRG00000018737	arl8ba	87	33.333
ENSNBRG00000004078	arl13b	73	30.319	ENSNBRG00000018555	-	89	30.645
ENSNBRG00000004078	arl13b	65	33.333	ENSNBRG00000010663	arl8a	87	33.333
ENSNBRG00000004078	arl13b	51	34.921	ENSNBRG00000008013	sar1b	64	34.921
ENSNBRG00000004078	arl13b	67	32.934	ENSNBRG00000016833	-	87	32.934
ENSNBRG00000004078	arl13b	76	31.771	ENSNBRG00000023542	arl8bb	97	31.771
ENSNBRG00000004078	arl13b	69	32.164	ENSNBRG00000010560	arl3l2	87	32.164
ENSNBRG00000004078	arl13b	69	32.749	ENSNBRG00000017218	arf3b	77	32.749
ENSNBRG00000004078	arl13b	69	31.579	ENSNBRG00000016455	-	90	31.579
ENSNBRG00000004078	arl13b	51	36.220	ENSNBRG00000018772	sar1ab	64	36.220
ENSNBRG00000004078	arl13b	70	31.844	ENSNBRG00000017591	ARL6	83	31.844
ENSNBRG00000004078	arl13b	69	31.609	ENSNBRG00000019783	arl1	90	31.609
ENSNBRG00000004078	arl13b	51	37.795	ENSNBRG00000014004	-	64	37.795
ENSNBRG00000004078	arl13b	90	46.903	ENSNBRG00000021766	arl13a	58	46.522
ENSNBRG00000004078	arl13b	69	32.948	ENSNBRG00000007962	arl3	90	32.948
ENSNBRG00000004078	arl13b	68	30.588	ENSNBRG00000020245	arl5c	89	32.886
ENSNBRG00000004078	arl13b	70	33.143	ENSNBRG00000005929	-	89	33.143
ENSNBRG00000004078	arl13b	67	32.335	ENSNBRG00000023803	arf2b	96	31.319
ENSNBRG00000004078	arl13b	73	30.108	ENSNBRG00000020745	arl4cb	88	30.769
ENSNBRG00000004078	arl13b	67	30.539	ENSNBRG00000000570	arl5a	89	30.539
ENSNBRG00000004078	arl13b	66	39.024	ENSNBRG00000006393	arl2	93	39.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004078	arl13b	92	97.817	ENSAPOG00000013256	arl13b	99	82.152	Acanthochromis_polyacanthus
ENSNBRG00000004078	arl13b	97	95.436	ENSACIG00000017582	arl13b	95	99.130	Amphilophus_citrinellus
ENSNBRG00000004078	arl13b	92	97.817	ENSAOCG00000002828	arl13b	99	82.152	Amphiprion_ocellaris
ENSNBRG00000004078	arl13b	92	97.817	ENSAPEG00000014654	arl13b	99	80.779	Amphiprion_percula
ENSNBRG00000004078	arl13b	84	98.095	ENSATEG00000017586	arl13b	97	80.000	Anabas_testudineus
ENSNBRG00000004078	arl13b	88	80.455	ENSACAG00000000523	ARL13B	79	76.580	Anolis_carolinensis
ENSNBRG00000004078	arl13b	100	94.629	ENSACLG00000024227	arl13b	100	94.629	Astatotilapia_calliptera
ENSNBRG00000004078	arl13b	91	92.035	ENSAMXG00000042824	arl13b	100	71.951	Astyanax_mexicanus
ENSNBRG00000004078	arl13b	82	81.773	ENSCAPG00000006764	ARL13B	94	63.764	Cavia_aperea
ENSNBRG00000004078	arl13b	86	78.140	ENSCPOG00000002558	ARL13B	99	61.417	Cavia_porcellus
ENSNBRG00000004078	arl13b	95	75.207	ENSCLAG00000006379	ARL13B	71	81.218	Chinchilla_lanigera
ENSNBRG00000004078	arl13b	90	81.614	ENSCPBG00000005599	ARL13B	100	58.430	Chrysemys_picta_bellii
ENSNBRG00000004078	arl13b	92	96.957	ENSCSEG00000005258	arl13b	99	77.751	Cynoglossus_semilaevis
ENSNBRG00000004078	arl13b	87	94.009	ENSCVAG00000001545	arl13b	91	94.323	Cyprinodon_variegatus
ENSNBRG00000004078	arl13b	87	92.627	ENSDARG00000012763	arl13b	92	89.958	Danio_rerio
ENSNBRG00000004078	arl13b	95	54.167	ENSEBUG00000006528	arl13b	85	55.947	Eptatretus_burgeri
ENSNBRG00000004078	arl13b	92	81.223	ENSEEUG00000010823	ARL13B	62	81.567	Erinaceus_europaeus
ENSNBRG00000004078	arl13b	87	77.778	ENSFALG00000001654	ARL13B	99	55.224	Ficedula_albicollis
ENSNBRG00000004078	arl13b	91	80.531	ENSFDAG00000006556	ARL13B	72	80.645	Fukomys_damarensis
ENSNBRG00000004078	arl13b	87	93.088	ENSFHEG00000016049	arl13b	99	77.749	Fundulus_heteroclitus
ENSNBRG00000004078	arl13b	83	88.835	ENSGMOG00000018628	arl13b	100	75.000	Gadus_morhua
ENSNBRG00000004078	arl13b	93	94.372	ENSGAFG00000000025	arl13b	86	94.372	Gambusia_affinis
ENSNBRG00000004078	arl13b	92	93.450	ENSGACG00000014228	arl13b	99	76.790	Gasterosteus_aculeatus
ENSNBRG00000004078	arl13b	91	80.973	ENSGAGG00000019336	ARL13B	100	56.479	Gopherus_agassizii
ENSNBRG00000004078	arl13b	100	94.629	ENSHBUG00000020619	arl13b	100	94.629	Haplochromis_burtoni
ENSNBRG00000004078	arl13b	92	96.070	ENSHCOG00000006106	arl13b	99	77.309	Hippocampus_comes
ENSNBRG00000004078	arl13b	92	97.380	ENSKMAG00000001122	arl13b	99	80.397	Kryptolebias_marmoratus
ENSNBRG00000004078	arl13b	90	95.067	ENSLBEG00000014612	arl13b	99	78.240	Labrus_bergylta
ENSNBRG00000004078	arl13b	95	85.115	ENSLOCG00000010465	arl13b	81	85.115	Lepisosteus_oculatus
ENSNBRG00000004078	arl13b	92	96.943	ENSMAMG00000021452	arl13b	99	75.610	Mastacembelus_armatus
ENSNBRG00000004078	arl13b	100	94.373	ENSMZEG00005017827	arl13b	100	94.373	Maylandia_zebra
ENSNBRG00000004078	arl13b	88	96.364	ENSMMOG00000010253	arl13b	99	84.278	Mola_mola
ENSNBRG00000004078	arl13b	92	96.943	ENSMALG00000014655	arl13b	99	83.019	Monopterus_albus
ENSNBRG00000004078	arl13b	96	73.606	MGP_CAROLIEiJ_G0020856	Arl13b	72	81.106	Mus_caroli
ENSNBRG00000004078	arl13b	96	73.606	ENSMUSG00000022911	Arl13b	72	81.106	Mus_musculus
ENSNBRG00000004078	arl13b	97	72.862	MGP_PahariEiJ_G0016561	Arl13b	73	81.106	Mus_pahari
ENSNBRG00000004078	arl13b	96	73.606	MGP_SPRETEiJ_G0021763	Arl13b	72	81.106	Mus_spretus
ENSNBRG00000004078	arl13b	92	73.600	ENSMLUG00000017473	ARL13B	68	80.303	Myotis_lucifugus
ENSNBRG00000004078	arl13b	92	76.856	ENSNLEG00000001772	ARL13B	70	76.498	Nomascus_leucogenys
ENSNBRG00000004078	arl13b	84	69.856	ENSMEUG00000008036	-	80	64.777	Notamacropus_eugenii
ENSNBRG00000004078	arl13b	92	80.349	ENSODEG00000011381	ARL13B	100	57.674	Octodon_degus
ENSNBRG00000004078	arl13b	92	100.000	ENSONIG00000001864	arl13b	93	99.240	Oreochromis_niloticus
ENSNBRG00000004078	arl13b	92	96.507	ENSORLG00000006350	arl13b	91	96.522	Oryzias_latipes
ENSNBRG00000004078	arl13b	92	96.507	ENSORLG00020013754	arl13b	99	80.303	Oryzias_latipes_hni
ENSNBRG00000004078	arl13b	92	96.070	ENSORLG00015012586	arl13b	99	80.303	Oryzias_latipes_hsok
ENSNBRG00000004078	arl13b	87	91.244	ENSOMEG00000010187	arl13b	89	91.703	Oryzias_melastigma
ENSNBRG00000004078	arl13b	92	82.969	ENSPSIG00000018115	ARL13B	99	61.425	Pelodiscus_sinensis
ENSNBRG00000004078	arl13b	87	95.853	ENSPMGG00000004584	arl13b	99	79.851	Periophthalmus_magnuspinnatus
ENSNBRG00000004078	arl13b	91	62.832	ENSPCIG00000026984	ARL13B	95	45.433	Phascolarctos_cinereus
ENSNBRG00000004078	arl13b	87	94.470	ENSPFOG00000005379	arl13b	100	80.299	Poecilia_formosa
ENSNBRG00000004078	arl13b	87	94.009	ENSPLAG00000008699	arl13b	99	79.787	Poecilia_latipinna
ENSNBRG00000004078	arl13b	96	78.811	ENSPMEG00000015387	arl13b	99	79.688	Poecilia_mexicana
ENSNBRG00000004078	arl13b	87	94.470	ENSPREG00000006291	arl13b	100	81.000	Poecilia_reticulata
ENSNBRG00000004078	arl13b	95	95.890	ENSPNYG00000022879	arl13b	98	95.890	Pundamilia_nyererei
ENSNBRG00000004078	arl13b	87	93.548	ENSPNAG00000003803	arl13b	100	74.146	Pygocentrus_nattereri
ENSNBRG00000004078	arl13b	90	84.889	ENSSFOG00015005491	arl13b	86	86.036	Scleropages_formosus
ENSNBRG00000004078	arl13b	86	72.222	ENSSFOG00015023057	arl13b	85	72.222	Scleropages_formosus
ENSNBRG00000004078	arl13b	99	78.827	ENSSMAG00000015450	arl13b	99	78.827	Scophthalmus_maximus
ENSNBRG00000004078	arl13b	92	98.253	ENSSDUG00000005560	arl13b	96	78.182	Seriola_dumerili
ENSNBRG00000004078	arl13b	92	98.253	ENSSLDG00000013361	arl13b	99	78.182	Seriola_lalandi_dorsalis
ENSNBRG00000004078	arl13b	90	79.018	ENSSARG00000003872	ARL13B	71	79.070	Sorex_araneus
ENSNBRG00000004078	arl13b	92	81.659	ENSSPUG00000006649	ARL13B	93	81.659	Sphenodon_punctatus
ENSNBRG00000004078	arl13b	92	98.253	ENSSPAG00000016442	arl13b	91	80.964	Stegastes_partitus
ENSNBRG00000004078	arl13b	92	77.293	ENSTGUG00000013493	ARL13B	100	55.035	Taeniopygia_guttata
ENSNBRG00000004078	arl13b	84	72.115	ENSTRUG00000003641	arl13b	79	72.115	Takifugu_rubripes
ENSNBRG00000004078	arl13b	92	71.739	ENSTRUG00000013035	-	89	71.739	Takifugu_rubripes
ENSNBRG00000004078	arl13b	91	78.319	ENSVVUG00000021511	ARL13B	100	53.613	Vulpes_vulpes
ENSNBRG00000004078	arl13b	84	41.706	ENSXETG00000026166	arl13a	50	41.315	Xenopus_tropicalis
ENSNBRG00000004078	arl13b	92	81.659	ENSXETG00000032383	ARL13B	83	81.659	Xenopus_tropicalis
ENSNBRG00000004078	arl13b	100	86.523	ENSXCOG00000016955	arl13b	100	86.523	Xiphophorus_couchianus
ENSNBRG00000004078	arl13b	87	94.009	ENSXMAG00000002089	arl13b	99	80.353	Xiphophorus_maculatus