EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004124 (Gene tree)
Gene ID: 102796411
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: ras-related protein Rab-13-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7854 bases
Position: chrJH422404.1:815826-823679
Accession: 102796411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005505	MMR_HSR1	PF01926.23	8.1e-05	1	1
ENSNBRP00000005473	MMR_HSR1	PF01926.23	9.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005716	-	282	-	ENSNBRP00000005550	93 (aa)	-	-
ENSNBRT00000005671	-	600	XM_006804869	ENSNBRP00000005505	199 (aa)	XP_006804932	UPI0003EBDF44
ENSNBRT00000005638	-	615	-	ENSNBRP00000005473	204 (aa)	-	-
ENSNBRT00000005684	-	339	-	ENSNBRP00000005518	112 (aa)	-	-
ENSNBRT00000005701	-	303	-	ENSNBRP00000005535	100 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000004124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004124	rab13	91	46.774	ENSNBRG00000012893	rab11a	90	44.149
ENSNBRG00000004124	rab13	76	46.053	ENSNBRG00000015905	rab6bb	76	46.053
ENSNBRG00000004124	rab13	96	35.417	ENSNBRG00000004403	kras	98	34.375
ENSNBRG00000004124	rab13	94	43.455	ENSNBRG00000008137	rab18b	93	43.979
ENSNBRG00000004124	rab13	84	42.775	ENSNBRG00000013673	rab6ba	83	42.775
ENSNBRG00000004124	rab13	89	47.027	ENSNBRG00000002082	rab30	84	47.027
ENSNBRG00000004124	rab13	90	56.111	ENSNBRG00000003873	rab1ba	88	56.111
ENSNBRG00000004124	rab13	88	55.429	ENSNBRG00000001056	rab15	82	55.429
ENSNBRG00000004124	rab13	81	41.317	ENSNBRG00000024340	RAB9A	78	41.317
ENSNBRG00000004124	rab13	92	42.553	ENSNBRG00000002726	-	87	42.553
ENSNBRG00000004124	rab13	85	50.000	ENSNBRG00000008930	si:dkey-16l2.16	81	50.000
ENSNBRG00000004124	rab13	84	37.647	ENSNBRG00000014613	si:ch73-116o1.2	81	37.647
ENSNBRG00000004124	rab13	96	35.266	ENSNBRG00000002772	-	100	35.266
ENSNBRG00000004124	rab13	88	56.667	ENSNBRG00000002778	RAB15	85	56.667
ENSNBRG00000004124	rab13	75	30.065	ENSNBRG00000005929	-	79	30.065
ENSNBRG00000004124	rab13	87	42.775	ENSNBRG00000016922	-	88	39.796
ENSNBRG00000004124	rab13	84	47.619	ENSNBRG00000001241	rab2a	79	47.619
ENSNBRG00000004124	rab13	86	36.813	ENSNBRG00000013691	rab23	95	34.872
ENSNBRG00000004124	rab13	81	32.370	ENSNBRG00000011713	rasl11a	67	32.370
ENSNBRG00000004124	rab13	69	31.884	ENSNBRG00000007962	arl3	72	31.884
ENSNBRG00000004124	rab13	91	30.542	ENSNBRG00000001521	-	94	30.542
ENSNBRG00000004124	rab13	91	45.405	ENSNBRG00000023898	rab11ba	72	44.444
ENSNBRG00000004124	rab13	94	36.765	ENSNBRG00000019750	rab34a	78	36.765
ENSNBRG00000004124	rab13	90	34.444	ENSNBRG00000013795	rheb	95	34.444
ENSNBRG00000004124	rab13	84	30.168	ENSNBRG00000022552	dnajc27	66	30.168
ENSNBRG00000004124	rab13	77	35.714	ENSNBRG00000016978	rhebl1	83	35.714
ENSNBRG00000004124	rab13	95	39.474	ENSNBRG00000011872	-	91	39.474
ENSNBRG00000004124	rab13	81	42.236	ENSNBRG00000018165	rab5c	80	39.205
ENSNBRG00000004124	rab13	89	44.751	ENSNBRG00000013507	rab18a	88	44.751
ENSNBRG00000004124	rab13	95	41.837	ENSNBRG00000005082	RAB39B	91	41.837
ENSNBRG00000004124	rab13	82	33.333	ENSNBRG00000003915	rasl11b	77	33.673
ENSNBRG00000004124	rab13	96	38.835	ENSNBRG00000005542	-	96	38.835
ENSNBRG00000004124	rab13	100	52.261	ENSNBRG00000006202	zgc:171927	94	52.261
ENSNBRG00000004124	rab13	56	37.168	ENSNBRG00000002346	RAP2B	94	37.600
ENSNBRG00000004124	rab13	90	37.297	ENSNBRG00000008714	RAB29	81	37.297
ENSNBRG00000004124	rab13	88	51.977	ENSNBRG00000014428	rab12	72	51.685
ENSNBRG00000004124	rab13	90	57.778	ENSNBRG00000020492	-	87	57.778
ENSNBRG00000004124	rab13	90	41.361	ENSNBRG00000016716	rab6a	76	45.570
ENSNBRG00000004124	rab13	95	39.286	ENSNBRG00000021487	rab42a	64	42.012
ENSNBRG00000004124	rab13	95	42.347	ENSNBRG00000018106	-	91	42.347
ENSNBRG00000004124	rab13	86	31.792	ENSNBRG00000000489	rabl2	74	31.792
ENSNBRG00000004124	rab13	85	38.857	ENSNBRG00000013940	rab9b	78	38.857
ENSNBRG00000004124	rab13	87	38.202	ENSNBRG00000002825	-	86	38.202
ENSNBRG00000004124	rab13	94	40.104	ENSNBRG00000011763	rab5aa	89	40.104
ENSNBRG00000004124	rab13	87	39.548	ENSNBRG00000023214	si:dkey-13a21.4	85	39.548
ENSNBRG00000004124	rab13	90	38.660	ENSNBRG00000007544	rab32b	89	38.660
ENSNBRG00000004124	rab13	91	45.405	ENSNBRG00000023885	-	87	44.974
ENSNBRG00000004124	rab13	89	40.110	ENSNBRG00000011607	rab25a	86	40.110
ENSNBRG00000004124	rab13	86	39.153	ENSNBRG00000007077	rab33ba	74	39.153
ENSNBRG00000004124	rab13	91	40.104	ENSNBRG00000017996	-	81	40.104
ENSNBRG00000004124	rab13	94	41.709	ENSNBRG00000022235	rab33a	82	41.709
ENSNBRG00000004124	rab13	95	39.594	ENSNBRG00000002684	zgc:101559	84	39.594
ENSNBRG00000004124	rab13	81	37.423	ENSNBRG00000017793	RAB17	72	37.423
ENSNBRG00000004124	rab13	92	45.213	ENSNBRG00000005116	rab11al	87	45.213
ENSNBRG00000004124	rab13	79	44.304	ENSNBRG00000022702	rab41	75	44.304
ENSNBRG00000004124	rab13	96	35.266	ENSNBRG00000021829	RAB7A	100	35.266
ENSNBRG00000004124	rab13	91	45.405	ENSNBRG00000000372	rab11bb	87	44.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004124	rab13	99	75.248	ENSG00000143545	RAB13	99	75.248	Homo_sapiens
ENSNBRG00000004124	rab13	92	94.652	ENSACIG00000008584	rab13	90	94.652	Amphilophus_citrinellus
ENSNBRG00000004124	rab13	99	75.610	ENSANAG00000030247	-	99	75.610	Aotus_nancymaae
ENSNBRG00000004124	rab13	100	90.594	ENSAMXG00000030712	rab13	100	90.594	Astyanax_mexicanus
ENSNBRG00000004124	rab13	99	74.634	ENSBTAG00000017604	RAB13	99	74.634	Bos_taurus
ENSNBRG00000004124	rab13	81	47.531	WBGene00019317	K02E10.1	74	47.531	Caenorhabditis_elegans
ENSNBRG00000004124	rab13	87	83.815	ENSCJAG00000009933	-	99	75.122	Callithrix_jacchus
ENSNBRG00000004124	rab13	99	74.257	ENSCHIG00000022271	-	99	74.257	Capra_hircus
ENSNBRG00000004124	rab13	99	74.257	ENSCPOG00000011491	-	99	74.257	Cavia_porcellus
ENSNBRG00000004124	rab13	99	75.248	ENSCCAG00000028502	-	99	75.248	Cebus_capucinus
ENSNBRG00000004124	rab13	99	75.248	ENSCATG00000041779	-	99	75.248	Cercocebus_atys
ENSNBRG00000004124	rab13	99	74.752	ENSCLAG00000006603	-	99	74.752	Chinchilla_lanigera
ENSNBRG00000004124	rab13	99	75.248	ENSCANG00000036573	-	99	75.248	Colobus_angolensis_palliatus
ENSNBRG00000004124	rab13	99	75.369	ENSCGRG00001021505	Rab13	99	75.369	Cricetulus_griseus_chok1gshd
ENSNBRG00000004124	rab13	99	75.369	ENSCGRG00000012126	Rab13	99	75.369	Cricetulus_griseus_crigri
ENSNBRG00000004124	rab13	100	93.000	ENSCSEG00000002358	rab13	100	93.000	Cynoglossus_semilaevis
ENSNBRG00000004124	rab13	100	90.500	ENSDARG00000034771	rab13	100	90.500	Danio_rerio
ENSNBRG00000004124	rab13	99	76.098	ENSDORG00000001591	Rab13	98	77.273	Dipodomys_ordii
ENSNBRG00000004124	rab13	99	75.248	ENSEASG00005000683	-	99	75.248	Equus_asinus_asinus
ENSNBRG00000004124	rab13	99	75.248	ENSECAG00000016551	RAB13	99	75.248	Equus_caballus
ENSNBRG00000004124	rab13	100	73.399	ENSEEUG00000001233	-	100	73.399	Erinaceus_europaeus
ENSNBRG00000004124	rab13	100	90.000	ENSELUG00000012801	rab13	100	90.000	Esox_lucius
ENSNBRG00000004124	rab13	99	74.146	ENSFCAG00000045269	-	99	74.146	Felis_catus
ENSNBRG00000004124	rab13	66	87.786	ENSFDAG00000014469	-	99	87.786	Fukomys_damarensis
ENSNBRG00000004124	rab13	100	90.500	ENSFHEG00000021221	rab13	97	94.915	Fundulus_heteroclitus
ENSNBRG00000004124	rab13	100	94.500	ENSGACG00000011925	rab13	99	94.500	Gasterosteus_aculeatus
ENSNBRG00000004124	rab13	89	83.708	ENSGAGG00000000742	-	100	78.109	Gopherus_agassizii
ENSNBRG00000004124	rab13	99	75.248	ENSGGOG00000023693	RAB13	99	75.248	Gorilla_gorilla
ENSNBRG00000004124	rab13	99	74.129	ENSHGLG00000008749	RAB13	99	74.129	Heterocephalus_glaber_female
ENSNBRG00000004124	rab13	99	74.129	ENSHGLG00100013608	RAB13	99	74.129	Heterocephalus_glaber_male
ENSNBRG00000004124	rab13	100	87.500	ENSHCOG00000007440	rab13	99	95.556	Hippocampus_comes
ENSNBRG00000004124	rab13	100	89.055	ENSIPUG00000003199	rab13	100	89.055	Ictalurus_punctatus
ENSNBRG00000004124	rab13	99	76.098	ENSSTOG00000011222	-	99	76.098	Ictidomys_tridecemlineatus
ENSNBRG00000004124	rab13	99	74.257	ENSJJAG00000010575	Rab13	99	74.257	Jaculus_jaculus
ENSNBRG00000004124	rab13	100	90.000	ENSKMAG00000001908	rab13	100	90.000	Kryptolebias_marmoratus
ENSNBRG00000004124	rab13	100	93.500	ENSLBEG00000026779	rab13	100	93.500	Labrus_bergylta
ENSNBRG00000004124	rab13	89	76.836	ENSLACG00000008103	-	100	76.966	Latimeria_chalumnae
ENSNBRG00000004124	rab13	99	75.248	ENSMFAG00000041018	RAB13	99	75.248	Macaca_fascicularis
ENSNBRG00000004124	rab13	99	75.248	ENSMNEG00000028951	-	99	75.248	Macaca_nemestrina
ENSNBRG00000004124	rab13	99	75.248	ENSMLEG00000042247	-	99	75.248	Mandrillus_leucophaeus
ENSNBRG00000004124	rab13	100	94.000	ENSMAMG00000014602	rab13	100	94.000	Mastacembelus_armatus
ENSNBRG00000004124	rab13	99	75.862	ENSMAUG00000015713	Rab13	99	75.862	Mesocricetus_auratus
ENSNBRG00000004124	rab13	99	77.114	ENSMICG00000010340	-	99	77.114	Microcebus_murinus
ENSNBRG00000004124	rab13	99	75.743	ENSMOCG00000021448	Rab13	99	75.743	Microtus_ochrogaster
ENSNBRG00000004124	rab13	98	77.500	ENSMODG00000017295	-	84	77.500	Monodelphis_domestica
ENSNBRG00000004124	rab13	99	73.762	MGP_CAROLIEiJ_G0025227	Rab13	99	73.762	Mus_caroli
ENSNBRG00000004124	rab13	99	74.129	ENSMUSG00000027935	Rab13	99	74.129	Mus_musculus
ENSNBRG00000004124	rab13	100	73.892	MGP_PahariEiJ_G0026671	Rab13	100	73.892	Mus_pahari
ENSNBRG00000004124	rab13	99	74.634	ENSNGAG00000010309	Rab13	99	74.634	Nannospalax_galili
ENSNBRG00000004124	rab13	99	75.248	ENSNLEG00000028944	-	99	76.923	Nomascus_leucogenys
ENSNBRG00000004124	rab13	99	78.218	ENSMEUG00000009667	-	99	78.218	Notamacropus_eugenii
ENSNBRG00000004124	rab13	63	89.683	ENSODEG00000012634	-	99	89.683	Octodon_degus
ENSNBRG00000004124	rab13	99	75.743	ENSODEG00000010443	-	99	75.743	Octodon_degus
ENSNBRG00000004124	rab13	100	91.584	ENSONIG00000006340	rab13	100	91.584	Oreochromis_niloticus
ENSNBRG00000004124	rab13	87	83.815	ENSOCUG00000006286	-	97	83.815	Oryctolagus_cuniculus
ENSNBRG00000004124	rab13	100	94.500	ENSOMEG00000008210	rab13	100	94.500	Oryzias_melastigma
ENSNBRG00000004124	rab13	99	75.124	ENSOGAG00000016969	-	99	75.124	Otolemur_garnettii
ENSNBRG00000004124	rab13	99	75.248	ENSPPAG00000028435	-	99	75.248	Pan_paniscus
ENSNBRG00000004124	rab13	99	74.146	ENSPPRG00000008865	-	99	74.146	Panthera_pardus
ENSNBRG00000004124	rab13	99	75.248	ENSPTRG00000001370	RAB13	99	75.248	Pan_troglodytes
ENSNBRG00000004124	rab13	99	75.248	ENSPANG00000004479	-	99	75.248	Papio_anubis
ENSNBRG00000004124	rab13	100	92.500	ENSPMGG00000007680	rab13	100	92.500	Periophthalmus_magnuspinnatus
ENSNBRG00000004124	rab13	63	78.030	ENSPEMG00000017353	-	99	78.030	Peromyscus_maniculatus_bairdii
ENSNBRG00000004124	rab13	99	78.218	ENSPCIG00000029350	-	99	78.218	Phascolarctos_cinereus
ENSNBRG00000004124	rab13	89	96.045	ENSPLAG00000005832	RAB13	95	96.067	Poecilia_latipinna
ENSNBRG00000004124	rab13	100	93.000	ENSPREG00000017567	rab13	100	93.000	Poecilia_reticulata
ENSNBRG00000004124	rab13	99	75.248	ENSPPYG00000000790	-	99	75.248	Pongo_abelii
ENSNBRG00000004124	rab13	99	77.114	ENSPCOG00000012189	-	99	77.114	Propithecus_coquereli
ENSNBRG00000004124	rab13	99	74.634	ENSPVAG00000011095	-	98	75.635	Pteropus_vampyrus
ENSNBRG00000004124	rab13	97	89.394	ENSPNAG00000004189	rab13	94	96.610	Pygocentrus_nattereri
ENSNBRG00000004124	rab13	99	74.752	ENSRNOG00000016733	Rab13	99	74.752	Rattus_norvegicus
ENSNBRG00000004124	rab13	99	75.248	ENSRBIG00000008552	-	99	75.248	Rhinopithecus_bieti
ENSNBRG00000004124	rab13	99	75.248	ENSRROG00000036885	-	99	75.248	Rhinopithecus_roxellana
ENSNBRG00000004124	rab13	99	76.119	ENSSBOG00000020342	-	99	76.119	Saimiri_boliviensis_boliviensis
ENSNBRG00000004124	rab13	99	78.713	ENSSHAG00000011866	-	99	78.713	Sarcophilus_harrisii
ENSNBRG00000004124	rab13	99	74.146	ENSSSCG00000006564	-	99	74.146	Sus_scrofa
ENSNBRG00000004124	rab13	100	95.000	ENSTRUG00000024177	rab13	100	95.000	Takifugu_rubripes
ENSNBRG00000004124	rab13	99	76.733	ENSTBEG00000012734	-	99	76.733	Tupaia_belangeri
ENSNBRG00000004124	rab13	99	75.122	ENSTTRG00000011183	-	99	75.122	Tursiops_truncatus
ENSNBRG00000004124	rab13	70	79.137	ENSXETG00000020729	rab13	100	73.125	Xenopus_tropicalis
ENSNBRG00000004124	rab13	89	94.915	ENSXCOG00000019533	rab13	95	94.944	Xiphophorus_couchianus