EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000004125 (Gene tree)
Gene ID: 102776256
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross-complementing protein 5-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4587 bases
Position: chrJH422458.1:553391-557977
Accession: 102776256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005383	SAP	PF02037.27	7.8e-10	1	1
ENSNBRP00000005439	SAP	PF02037.27	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005602	-	1791	-	ENSNBRP00000005439	596 (aa)	-	-
ENSNBRT00000005545	-	1833	XM_006807275	ENSNBRP00000005383	610 (aa)	XP_006807338	UPI0003EC533C

Gene Model

Click here to download ENSNBRG00000004125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004125	xrcc6	99	56.743	ENSG00000196419	XRCC6	99	56.908	Homo_sapiens
ENSNBRG00000004125	xrcc6	99	88.506	ENSAPOG00000012704	xrcc6	100	88.506	Acanthochromis_polyacanthus
ENSNBRG00000004125	xrcc6	100	91.803	ENSACIG00000021277	xrcc6	100	91.803	Amphilophus_citrinellus
ENSNBRG00000004125	xrcc6	100	88.852	ENSAOCG00000021344	xrcc6	100	88.852	Amphiprion_ocellaris
ENSNBRG00000004125	xrcc6	100	89.016	ENSAPEG00000020712	xrcc6	100	89.016	Amphiprion_percula
ENSNBRG00000004125	xrcc6	100	89.016	ENSATEG00000007119	xrcc6	100	89.016	Anabas_testudineus
ENSNBRG00000004125	xrcc6	89	61.172	ENSAPLG00000004469	XRCC6	98	61.172	Anas_platyrhynchos
ENSNBRG00000004125	xrcc6	99	56.743	ENSANAG00000018684	XRCC6	98	58.088	Aotus_nancymaae
ENSNBRG00000004125	xrcc6	99	50.822	ENSANAG00000035230	-	99	50.658	Aotus_nancymaae
ENSNBRG00000004125	xrcc6	99	50.579	ENSANAG00000020017	-	99	50.579	Aotus_nancymaae
ENSNBRG00000004125	xrcc6	99	48.609	ENSANAG00000023445	-	99	48.609	Aotus_nancymaae
ENSNBRG00000004125	xrcc6	100	98.525	ENSACLG00000018608	xrcc6	100	98.525	Astatotilapia_calliptera
ENSNBRG00000004125	xrcc6	99	77.796	ENSAMXG00000007545	xrcc6	99	77.796	Astyanax_mexicanus
ENSNBRG00000004125	xrcc6	99	56.743	ENSCJAG00000045512	XRCC6	99	56.743	Callithrix_jacchus
ENSNBRG00000004125	xrcc6	99	55.592	ENSTSYG00000011348	XRCC6	99	55.757	Carlito_syrichta
ENSNBRG00000004125	xrcc6	92	55.242	ENSCCAG00000030468	-	99	55.242	Cebus_capucinus
ENSNBRG00000004125	xrcc6	99	53.618	ENSCCAG00000030041	-	94	53.618	Cebus_capucinus
ENSNBRG00000004125	xrcc6	99	46.053	ENSCCAG00000035711	-	99	46.053	Cebus_capucinus
ENSNBRG00000004125	xrcc6	99	47.769	ENSCCAG00000037663	-	96	47.603	Cebus_capucinus
ENSNBRG00000004125	xrcc6	99	56.743	ENSCATG00000042366	XRCC6	99	56.908	Cercocebus_atys
ENSNBRG00000004125	xrcc6	99	56.507	ENSCLAG00000016669	XRCC6	99	56.343	Chinchilla_lanigera
ENSNBRG00000004125	xrcc6	99	56.743	ENSCSAG00000005784	XRCC6	99	56.908	Chlorocebus_sabaeus
ENSNBRG00000004125	xrcc6	99	59.143	ENSCPBG00000020535	XRCC6	99	58.814	Chrysemys_picta_bellii
ENSNBRG00000004125	xrcc6	98	35.167	ENSCING00000000633	-	95	34.940	Ciona_intestinalis
ENSNBRG00000004125	xrcc6	99	56.743	ENSCANG00000031032	XRCC6	99	56.908	Colobus_angolensis_palliatus
ENSNBRG00000004125	xrcc6	99	52.970	ENSCGRG00001019029	Xrcc6	99	52.970	Cricetulus_griseus_chok1gshd
ENSNBRG00000004125	xrcc6	99	57.096	ENSCGRG00000001528	Xrcc6	99	57.096	Cricetulus_griseus_crigri
ENSNBRG00000004125	xrcc6	100	80.492	ENSCSEG00000020434	xrcc6	100	80.492	Cynoglossus_semilaevis
ENSNBRG00000004125	xrcc6	100	85.574	ENSCVAG00000002189	xrcc6	100	85.574	Cyprinodon_variegatus
ENSNBRG00000004125	xrcc6	99	76.026	ENSDARG00000071551	xrcc6	99	75.698	Danio_rerio
ENSNBRG00000004125	xrcc6	77	52.927	ENSETEG00000015333	-	67	52.927	Echinops_telfairi
ENSNBRG00000004125	xrcc6	99	55.519	ENSEASG00005001514	XRCC6	99	55.519	Equus_asinus_asinus
ENSNBRG00000004125	xrcc6	99	55.519	ENSECAG00000017563	XRCC6	99	55.971	Equus_caballus
ENSNBRG00000004125	xrcc6	100	75.738	ENSELUG00000020301	xrcc6	100	75.738	Esox_lucius
ENSNBRG00000004125	xrcc6	99	58.920	ENSFALG00000011908	XRCC6	96	59.083	Ficedula_albicollis
ENSNBRG00000004125	xrcc6	100	87.049	ENSFHEG00000016833	xrcc6	100	87.049	Fundulus_heteroclitus
ENSNBRG00000004125	xrcc6	99	69.218	ENSGMOG00000013524	xrcc6	100	69.055	Gadus_morhua
ENSNBRG00000004125	xrcc6	99	58.333	ENSGALG00000011932	XRCC6	99	58.497	Gallus_gallus
ENSNBRG00000004125	xrcc6	100	83.607	ENSGAFG00000008130	xrcc6	100	83.607	Gambusia_affinis
ENSNBRG00000004125	xrcc6	99	83.550	ENSGACG00000004868	xrcc6	99	82.410	Gasterosteus_aculeatus
ENSNBRG00000004125	xrcc6	99	58.979	ENSGAGG00000017518	XRCC6	99	58.649	Gopherus_agassizii
ENSNBRG00000004125	xrcc6	99	56.743	ENSGGOG00000015885	XRCC6	99	56.908	Gorilla_gorilla
ENSNBRG00000004125	xrcc6	93	98.587	ENSHBUG00000023281	xrcc6	100	98.587	Haplochromis_burtoni
ENSNBRG00000004125	xrcc6	99	55.776	ENSHGLG00000018078	XRCC6	99	55.611	Heterocephalus_glaber_female
ENSNBRG00000004125	xrcc6	99	55.776	ENSHGLG00100011264	XRCC6	99	55.611	Heterocephalus_glaber_male
ENSNBRG00000004125	xrcc6	100	79.836	ENSHCOG00000009821	xrcc6	100	79.836	Hippocampus_comes
ENSNBRG00000004125	xrcc6	99	76.026	ENSIPUG00000000767	xrcc6	99	76.151	Ictalurus_punctatus
ENSNBRG00000004125	xrcc6	99	56.507	ENSSTOG00000009490	XRCC6	99	56.178	Ictidomys_tridecemlineatus
ENSNBRG00000004125	xrcc6	99	52.053	ENSJJAG00000017136	Xrcc6	99	52.874	Jaculus_jaculus
ENSNBRG00000004125	xrcc6	99	86.207	ENSKMAG00000002141	xrcc6	99	86.207	Kryptolebias_marmoratus
ENSNBRG00000004125	xrcc6	99	86.184	ENSLBEG00000002691	xrcc6	99	86.184	Labrus_bergylta
ENSNBRG00000004125	xrcc6	87	68.367	ENSLOCG00000011533	xrcc6	99	68.367	Lepisosteus_oculatus
ENSNBRG00000004125	xrcc6	99	56.743	ENSMFAG00000003352	XRCC6	99	56.908	Macaca_fascicularis
ENSNBRG00000004125	xrcc6	99	56.743	ENSMMUG00000001856	XRCC6	99	56.908	Macaca_mulatta
ENSNBRG00000004125	xrcc6	99	56.743	ENSMNEG00000035076	XRCC6	99	56.908	Macaca_nemestrina
ENSNBRG00000004125	xrcc6	99	56.743	ENSMLEG00000019869	XRCC6	99	56.908	Mandrillus_leucophaeus
ENSNBRG00000004125	xrcc6	96	83.986	ENSMAMG00000003405	xrcc6	97	83.959	Mastacembelus_armatus
ENSNBRG00000004125	xrcc6	100	85.270	ENSMAMG00000003368	xrcc6	100	85.270	Mastacembelus_armatus
ENSNBRG00000004125	xrcc6	100	98.361	ENSMZEG00005028080	xrcc6	100	98.361	Maylandia_zebra
ENSNBRG00000004125	xrcc6	99	58.891	ENSMGAG00000012146	XRCC6	98	59.054	Meleagris_gallopavo
ENSNBRG00000004125	xrcc6	99	57.096	ENSMAUG00000017340	Xrcc6	99	57.096	Mesocricetus_auratus
ENSNBRG00000004125	xrcc6	99	56.766	ENSMOCG00000015717	Xrcc6	99	56.931	Microtus_ochrogaster
ENSNBRG00000004125	xrcc6	100	84.098	ENSMMOG00000003536	xrcc6	99	84.098	Mola_mola
ENSNBRG00000004125	xrcc6	100	87.049	ENSMALG00000013912	xrcc6	95	87.049	Monopterus_albus
ENSNBRG00000004125	xrcc6	99	53.934	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.934	Mus_caroli
ENSNBRG00000004125	xrcc6	99	57.541	ENSMUSG00000022471	Xrcc6	99	60.076	Mus_musculus
ENSNBRG00000004125	xrcc6	99	57.377	MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	Mus_pahari
ENSNBRG00000004125	xrcc6	95	58.148	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.148	Mus_spretus
ENSNBRG00000004125	xrcc6	99	56.271	ENSNGAG00000013750	Xrcc6	99	56.271	Nannospalax_galili
ENSNBRG00000004125	xrcc6	95	57.513	ENSOPRG00000002386	XRCC6	99	57.513	Ochotona_princeps
ENSNBRG00000004125	xrcc6	99	55.810	ENSODEG00000015847	XRCC6	99	55.483	Octodon_degus
ENSNBRG00000004125	xrcc6	100	97.213	ENSONIG00000019715	xrcc6	100	97.213	Oreochromis_niloticus
ENSNBRG00000004125	xrcc6	68	58.495	ENSOANG00000011328	XRCC6	99	58.495	Ornithorhynchus_anatinus
ENSNBRG00000004125	xrcc6	99	56.178	ENSOCUG00000006948	XRCC6	99	56.178	Oryctolagus_cuniculus
ENSNBRG00000004125	xrcc6	100	85.270	ENSORLG00020007820	xrcc6	100	85.270	Oryzias_latipes_hni
ENSNBRG00000004125	xrcc6	100	84.943	ENSORLG00015006406	xrcc6	100	84.943	Oryzias_latipes_hsok
ENSNBRG00000004125	xrcc6	100	85.761	ENSOMEG00000008998	xrcc6	100	85.761	Oryzias_melastigma
ENSNBRG00000004125	xrcc6	99	56.343	ENSOGAG00000008821	XRCC6	99	56.013	Otolemur_garnettii
ENSNBRG00000004125	xrcc6	99	51.347	ENSPPAG00000037167	XRCC6	99	58.908	Pan_paniscus
ENSNBRG00000004125	xrcc6	99	56.743	ENSPTRG00000022548	XRCC6	99	56.908	Pan_troglodytes
ENSNBRG00000004125	xrcc6	99	56.743	ENSPTRG00000045824	XRCC6	99	56.908	Pan_troglodytes
ENSNBRG00000004125	xrcc6	99	56.579	ENSPANG00000001252	XRCC6	97	60.526	Papio_anubis
ENSNBRG00000004125	xrcc6	99	72.039	ENSPKIG00000003974	xrcc6	99	72.039	Paramormyrops_kingsleyae
ENSNBRG00000004125	xrcc6	99	81.561	ENSPMGG00000014220	xrcc6	100	81.561	Periophthalmus_magnuspinnatus
ENSNBRG00000004125	xrcc6	99	56.931	ENSPEMG00000023446	Xrcc6	99	56.931	Peromyscus_maniculatus_bairdii
ENSNBRG00000004125	xrcc6	99	58.155	ENSPCIG00000026409	XRCC6	99	57.990	Phascolarctos_cinereus
ENSNBRG00000004125	xrcc6	100	85.902	ENSPFOG00000017173	xrcc6	100	85.902	Poecilia_formosa
ENSNBRG00000004125	xrcc6	100	85.410	ENSPLAG00000000562	xrcc6	100	85.410	Poecilia_latipinna
ENSNBRG00000004125	xrcc6	100	85.738	ENSPMEG00000018478	xrcc6	100	85.738	Poecilia_mexicana
ENSNBRG00000004125	xrcc6	100	85.621	ENSPREG00000020957	xrcc6	93	85.621	Poecilia_reticulata
ENSNBRG00000004125	xrcc6	99	50.987	ENSPPYG00000011876	XRCC6	99	51.151	Pongo_abelii
ENSNBRG00000004125	xrcc6	99	56.601	ENSPVAG00000001168	XRCC6	99	56.106	Pteropus_vampyrus
ENSNBRG00000004125	xrcc6	100	98.197	ENSPNYG00000003815	xrcc6	100	93.448	Pundamilia_nyererei
ENSNBRG00000004125	xrcc6	99	56.721	ENSRNOG00000006392	Xrcc6	99	56.885	Rattus_norvegicus
ENSNBRG00000004125	xrcc6	99	52.303	ENSRBIG00000039794	XRCC6	98	53.541	Rhinopithecus_bieti
ENSNBRG00000004125	xrcc6	99	56.743	ENSRROG00000030297	XRCC6	99	56.908	Rhinopithecus_roxellana
ENSNBRG00000004125	xrcc6	66	51.852	ENSSBOG00000024724	-	98	51.852	Saimiri_boliviensis_boliviensis
ENSNBRG00000004125	xrcc6	99	57.237	ENSSHAG00000010790	XRCC6	99	57.072	Sarcophilus_harrisii
ENSNBRG00000004125	xrcc6	99	74.178	ENSSFOG00015014409	xrcc6	99	74.178	Scleropages_formosus
ENSNBRG00000004125	xrcc6	100	88.033	ENSSMAG00000006496	xrcc6	100	88.033	Scophthalmus_maximus
ENSNBRG00000004125	xrcc6	100	88.525	ENSSDUG00000007542	xrcc6	100	88.525	Seriola_dumerili
ENSNBRG00000004125	xrcc6	100	87.869	ENSSLDG00000009974	xrcc6	100	87.869	Seriola_lalandi_dorsalis
ENSNBRG00000004125	xrcc6	99	58.882	ENSSPUG00000012086	XRCC6	99	58.717	Sphenodon_punctatus
ENSNBRG00000004125	xrcc6	100	88.033	ENSSPAG00000015199	xrcc6	100	88.033	Stegastes_partitus
ENSNBRG00000004125	xrcc6	95	60.309	ENSTGUG00000009852	-	94	60.622	Taeniopygia_guttata
ENSNBRG00000004125	xrcc6	99	79.639	ENSTRUG00000017070	xrcc6	99	80.131	Takifugu_rubripes
ENSNBRG00000004125	xrcc6	96	79.695	ENSTNIG00000012947	xrcc6	99	79.695	Tetraodon_nigroviridis
ENSNBRG00000004125	xrcc6	95	53.368	ENSTBEG00000011736	XRCC6	99	53.368	Tupaia_belangeri
ENSNBRG00000004125	xrcc6	90	53.271	ENSTTRG00000006749	XRCC6	90	53.271	Tursiops_truncatus
ENSNBRG00000004125	xrcc6	100	85.738	ENSXMAG00000009691	xrcc6	100	85.738	Xiphophorus_maculatus