EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000004332 (Gene tree)
Gene ID: -
Gene Symbol: smg5
Alias: zgc:113841
Full Name: protein SMG5-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 27253 bases
Position: chrJH422356.1:1367817-1395069
Accession: 102797181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005537	EST1	PF10374.9	3.1e-24	1	1
ENSNBRP00000005537	EST1_DNA_bind	PF10373.9	4.7e-39	1	1
ENSNBRP00000005537	PIN_4	PF13638.6	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005703	-	2823	XM_006801830	ENSNBRP00000005537	940 (aa)	XP_006801893	-

Gene Model

Click here to download ENSNBRG00000004332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004332	smg5	98	65.000	ENSG00000198952	SMG5	97	63.063	Homo_sapiens
ENSNBRG00000004332	smg5	98	84.520	ENSAPOG00000019690	smg5	97	84.086	Acanthochromis_polyacanthus
ENSNBRG00000004332	smg5	96	62.104	ENSAMEG00000014458	SMG5	97	61.900	Ailuropoda_melanoleuca
ENSNBRG00000004332	smg5	98	86.214	ENSACIG00000001353	smg5	97	86.414	Amphilophus_citrinellus
ENSNBRG00000004332	smg5	96	85.669	ENSAOCG00000019483	smg5	93	85.564	Amphiprion_ocellaris
ENSNBRG00000004332	smg5	95	85.911	ENSAPEG00000022949	smg5	95	85.458	Amphiprion_percula
ENSNBRG00000004332	smg5	98	82.300	ENSATEG00000005348	smg5	97	83.518	Anabas_testudineus
ENSNBRG00000004332	smg5	96	62.351	ENSAPLG00000010263	SMG5	97	62.052	Anas_platyrhynchos
ENSNBRG00000004332	smg5	98	64.028	ENSANAG00000032899	SMG5	97	63.216	Aotus_nancymaae
ENSNBRG00000004332	smg5	98	89.484	ENSACLG00000009311	smg5	97	89.889	Astatotilapia_calliptera
ENSNBRG00000004332	smg5	98	71.963	ENSAMXG00000024616	smg5	97	71.788	Astyanax_mexicanus
ENSNBRG00000004332	smg5	98	64.393	ENSBTAG00000009435	SMG5	97	63.363	Bos_taurus
ENSNBRG00000004332	smg5	97	39.485	ENSBTAG00000021747	-	95	38.780	Bos_taurus
ENSNBRG00000004332	smg5	98	64.028	ENSCJAG00000005684	SMG5	97	63.343	Callithrix_jacchus
ENSNBRG00000004332	smg5	98	63.471	ENSCAFG00000016839	SMG5	96	62.993	Canis_familiaris
ENSNBRG00000004332	smg5	98	63.471	ENSCAFG00020006061	SMG5	96	62.993	Canis_lupus_dingo
ENSNBRG00000004332	smg5	98	64.322	ENSCHIG00000007709	SMG5	97	63.564	Capra_hircus
ENSNBRG00000004332	smg5	96	38.895	ENSCHIG00000006323	-	95	38.582	Capra_hircus
ENSNBRG00000004332	smg5	98	64.700	ENSTSYG00000004099	SMG5	97	62.537	Carlito_syrichta
ENSNBRG00000004332	smg5	92	47.599	ENSCAPG00000003631	SMG5	96	47.979	Cavia_aperea
ENSNBRG00000004332	smg5	98	63.755	ENSCPOG00000015696	SMG5	97	63.037	Cavia_porcellus
ENSNBRG00000004332	smg5	98	64.085	ENSCCAG00000027409	SMG5	97	63.243	Cebus_capucinus
ENSNBRG00000004332	smg5	98	64.293	ENSCATG00000030539	SMG5	97	63.163	Cercocebus_atys
ENSNBRG00000004332	smg5	98	63.964	ENSCLAG00000003983	SMG5	97	62.712	Chinchilla_lanigera
ENSNBRG00000004332	smg5	98	64.293	ENSCSAG00000002120	SMG5	97	63.163	Chlorocebus_sabaeus
ENSNBRG00000004332	smg5	54	75.812	ENSCHOG00000008741	-	56	75.812	Choloepus_hoffmanni
ENSNBRG00000004332	smg5	91	61.594	ENSCPBG00000025848	SMG5	97	61.698	Chrysemys_picta_bellii
ENSNBRG00000004332	smg5	94	33.574	ENSCING00000008706	-	98	32.169	Ciona_intestinalis
ENSNBRG00000004332	smg5	98	62.857	ENSCANG00000029208	SMG5	97	61.483	Colobus_angolensis_palliatus
ENSNBRG00000004332	smg5	98	63.646	ENSCGRG00001006336	Smg5	96	63.105	Cricetulus_griseus_chok1gshd
ENSNBRG00000004332	smg5	96	63.487	ENSCGRG00000005111	Smg5	97	62.898	Cricetulus_griseus_crigri
ENSNBRG00000004332	smg5	98	81.111	ENSCSEG00000014220	smg5	97	81.212	Cynoglossus_semilaevis
ENSNBRG00000004332	smg5	98	76.701	ENSCVAG00000000529	smg5	97	76.004	Cyprinodon_variegatus
ENSNBRG00000004332	smg5	98	72.037	ENSDARG00000041481	smg5	97	71.244	Danio_rerio
ENSNBRG00000004332	smg5	93	32.611	ENSDNOG00000039862	-	99	31.128	Dasypus_novemcinctus
ENSNBRG00000004332	smg5	98	61.523	ENSDNOG00000000051	SMG5	97	60.222	Dasypus_novemcinctus
ENSNBRG00000004332	smg5	98	64.228	ENSDORG00000010382	Smg5	96	63.333	Dipodomys_ordii
ENSNBRG00000004332	smg5	74	85.437	ENSETEG00000010336	SMG5	78	85.437	Echinops_telfairi
ENSNBRG00000004332	smg5	92	45.455	ENSEBUG00000003739	smg5	99	46.063	Eptatretus_burgeri
ENSNBRG00000004332	smg5	98	64.487	ENSEASG00005019122	SMG5	97	63.646	Equus_asinus_asinus
ENSNBRG00000004332	smg5	98	64.386	ENSECAG00000001389	SMG5	97	63.646	Equus_caballus
ENSNBRG00000004332	smg5	71	78.814	ENSEEUG00000012690	SMG5	71	77.465	Erinaceus_europaeus
ENSNBRG00000004332	smg5	98	76.700	ENSELUG00000012585	smg5	97	76.100	Esox_lucius
ENSNBRG00000004332	smg5	98	63.434	ENSFCAG00000011783	SMG5	96	62.854	Felis_catus
ENSNBRG00000004332	smg5	60	67.912	ENSFALG00000001166	-	96	67.233	Ficedula_albicollis
ENSNBRG00000004332	smg5	96	63.804	ENSFDAG00000017388	SMG5	97	62.883	Fukomys_damarensis
ENSNBRG00000004332	smg5	92	78.953	ENSFHEG00000013939	smg5	95	78.149	Fundulus_heteroclitus
ENSNBRG00000004332	smg5	98	69.810	ENSGMOG00000007310	smg5	97	71.324	Gadus_morhua
ENSNBRG00000004332	smg5	97	62.832	ENSGALG00000029918	-	97	62.341	Gallus_gallus
ENSNBRG00000004332	smg5	97	73.483	ENSGAFG00000021691	smg5	97	73.955	Gambusia_affinis
ENSNBRG00000004332	smg5	97	75.092	ENSGACG00000013142	smg5	97	75.929	Gasterosteus_aculeatus
ENSNBRG00000004332	smg5	98	62.439	ENSGAGG00000016131	SMG5	97	62.536	Gopherus_agassizii
ENSNBRG00000004332	smg5	98	64.835	ENSGGOG00000010932	SMG5	97	62.963	Gorilla_gorilla
ENSNBRG00000004332	smg5	98	88.554	ENSHBUG00000008654	smg5	97	88.611	Haplochromis_burtoni
ENSNBRG00000004332	smg5	97	64.365	ENSHGLG00000019152	SMG5	96	63.343	Heterocephalus_glaber_female
ENSNBRG00000004332	smg5	90	64.030	ENSHGLG00100015948	SMG5	99	62.943	Heterocephalus_glaber_male
ENSNBRG00000004332	smg5	96	65.890	ENSHCOG00000010229	smg5	90	83.133	Hippocampus_comes
ENSNBRG00000004332	smg5	98	71.933	ENSIPUG00000006624	Smg5	97	71.283	Ictalurus_punctatus
ENSNBRG00000004332	smg5	98	64.400	ENSSTOG00000001780	SMG5	97	63.343	Ictidomys_tridecemlineatus
ENSNBRG00000004332	smg5	98	63.664	ENSJJAG00000022763	Smg5	97	63.636	Jaculus_jaculus
ENSNBRG00000004332	smg5	97	76.789	ENSKMAG00000014586	smg5	97	76.972	Kryptolebias_marmoratus
ENSNBRG00000004332	smg5	97	86.368	ENSLBEG00000002145	smg5	95	86.264	Labrus_bergylta
ENSNBRG00000004332	smg5	97	56.962	ENSLACG00000010521	SMG5	96	57.311	Latimeria_chalumnae
ENSNBRG00000004332	smg5	95	83.333	ENSLOCG00000008380	smg5	99	66.129	Lepisosteus_oculatus
ENSNBRG00000004332	smg5	98	62.877	ENSLAFG00000006241	SMG5	96	63.249	Loxodonta_africana
ENSNBRG00000004332	smg5	98	64.293	ENSMFAG00000045357	SMG5	97	63.037	Macaca_fascicularis
ENSNBRG00000004332	smg5	98	65.789	ENSMMUG00000000090	SMG5	97	63.802	Macaca_mulatta
ENSNBRG00000004332	smg5	98	64.193	ENSMNEG00000044425	SMG5	97	63.063	Macaca_nemestrina
ENSNBRG00000004332	smg5	98	59.215	ENSMLEG00000041192	SMG5	97	58.492	Mandrillus_leucophaeus
ENSNBRG00000004332	smg5	97	75.643	ENSMAMG00000010683	smg5	97	75.919	Mastacembelus_armatus
ENSNBRG00000004332	smg5	57	81.250	ENSMZEG00005016543	smg5	95	81.250	Maylandia_zebra
ENSNBRG00000004332	smg5	97	86.701	ENSMZEG00005015815	smg5	96	86.701	Maylandia_zebra
ENSNBRG00000004332	smg5	58	41.547	ENSMAUG00000000043	-	68	50.256	Mesocricetus_auratus
ENSNBRG00000004332	smg5	98	63.911	ENSMAUG00000010381	Smg5	96	63.004	Mesocricetus_auratus
ENSNBRG00000004332	smg5	98	64.242	ENSMICG00000002257	SMG5	96	63.015	Microcebus_murinus
ENSNBRG00000004332	smg5	98	63.417	ENSMOCG00000016590	Smg5	96	63.454	Microtus_ochrogaster
ENSNBRG00000004332	smg5	97	73.562	ENSMMOG00000017199	smg5	97	74.077	Mola_mola
ENSNBRG00000004332	smg5	75	33.590	ENSMODG00000010675	-	82	33.846	Monodelphis_domestica
ENSNBRG00000004332	smg5	76	32.458	ENSMODG00000004735	-	84	32.458	Monodelphis_domestica
ENSNBRG00000004332	smg5	68	40.132	ENSMODG00000004532	-	83	35.062	Monodelphis_domestica
ENSNBRG00000004332	smg5	87	63.575	ENSMODG00000016901	SMG5	98	62.569	Monodelphis_domestica
ENSNBRG00000004332	smg5	97	74.241	ENSMALG00000010375	smg5	97	74.701	Monopterus_albus
ENSNBRG00000004332	smg5	98	64.012	MGP_CAROLIEiJ_G0025163	Smg5	100	88.268	Mus_caroli
ENSNBRG00000004332	smg5	98	63.710	ENSMUSG00000001415	Smg5	99	88.268	Mus_musculus
ENSNBRG00000004332	smg5	98	64.286	MGP_PahariEiJ_G0026606	Smg5	100	88.827	Mus_pahari
ENSNBRG00000004332	smg5	98	63.609	MGP_SPRETEiJ_G0026104	Smg5	100	88.268	Mus_spretus
ENSNBRG00000004332	smg5	91	63.011	ENSMPUG00000004546	SMG5	97	61.736	Mustela_putorius_furo
ENSNBRG00000004332	smg5	98	64.794	ENSMLUG00000008518	SMG5	97	63.618	Myotis_lucifugus
ENSNBRG00000004332	smg5	97	64.178	ENSNGAG00000020706	Smg5	96	63.015	Nannospalax_galili
ENSNBRG00000004332	smg5	96	38.710	ENSNGAG00000012101	-	95	37.913	Nannospalax_galili
ENSNBRG00000004332	smg5	98	65.135	ENSNLEG00000012439	SMG5	97	63.200	Nomascus_leucogenys
ENSNBRG00000004332	smg5	98	62.941	ENSMEUG00000012834	SMG5	97	61.838	Notamacropus_eugenii
ENSNBRG00000004332	smg5	98	64.895	ENSOPRG00000009152	SMG5	97	62.963	Ochotona_princeps
ENSNBRG00000004332	smg5	98	63.855	ENSODEG00000012237	SMG5	97	63.664	Octodon_degus
ENSNBRG00000004332	smg5	97	80.183	ENSONIG00000008632	smg5	97	80.550	Oreochromis_niloticus
ENSNBRG00000004332	smg5	90	35.659	ENSOCUG00000023338	-	99	34.213	Oryctolagus_cuniculus
ENSNBRG00000004332	smg5	96	64.821	ENSOCUG00000012886	SMG5	97	62.986	Oryctolagus_cuniculus
ENSNBRG00000004332	smg5	97	74.419	ENSORLG00000016239	smg5	97	75.907	Oryzias_latipes
ENSNBRG00000004332	smg5	97	81.894	ENSORLG00020013127	smg5	96	82.046	Oryzias_latipes_hni
ENSNBRG00000004332	smg5	98	81.173	ENSORLG00015019014	smg5	96	81.153	Oryzias_latipes_hsok
ENSNBRG00000004332	smg5	82	73.069	ENSOMEG00000021330	smg5	92	72.610	Oryzias_melastigma
ENSNBRG00000004332	smg5	98	64.048	ENSOGAG00000004966	SMG5	96	63.535	Otolemur_garnettii
ENSNBRG00000004332	smg5	98	64.386	ENSOARG00000005778	SMG5	97	63.564	Ovis_aries
ENSNBRG00000004332	smg5	97	39.422	ENSOARG00000011963	-	96	39.009	Ovis_aries
ENSNBRG00000004332	smg5	98	65.196	ENSPPAG00000011996	SMG5	97	63.063	Pan_paniscus
ENSNBRG00000004332	smg5	96	63.412	ENSPPRG00000011901	SMG5	97	62.616	Panthera_pardus
ENSNBRG00000004332	smg5	96	60.847	ENSPTIG00000007892	SMG5	96	59.813	Panthera_tigris_altaica
ENSNBRG00000004332	smg5	98	65.196	ENSPTRG00000049282	-	97	63.063	Pan_troglodytes
ENSNBRG00000004332	smg5	98	65.196	ENSPTRG00000023925	SMG5	97	63.063	Pan_troglodytes
ENSNBRG00000004332	smg5	98	64.293	ENSPANG00000011201	SMG5	97	63.163	Papio_anubis
ENSNBRG00000004332	smg5	97	75.533	ENSPKIG00000009402	smg5	96	75.127	Paramormyrops_kingsleyae
ENSNBRG00000004332	smg5	96	64.235	ENSPSIG00000015198	SMG5	97	63.931	Pelodiscus_sinensis
ENSNBRG00000004332	smg5	98	69.216	ENSPMGG00000010465	smg5	97	68.827	Periophthalmus_magnuspinnatus
ENSNBRG00000004332	smg5	98	64.085	ENSPEMG00000001819	Smg5	96	63.105	Peromyscus_maniculatus_bairdii
ENSNBRG00000004332	smg5	98	48.155	ENSPMAG00000000410	smg5	99	48.123	Petromyzon_marinus
ENSNBRG00000004332	smg5	97	64.012	ENSPCIG00000018938	SMG5	96	63.026	Phascolarctos_cinereus
ENSNBRG00000004332	smg5	98	75.184	ENSPFOG00000010191	smg5	97	74.747	Poecilia_formosa
ENSNBRG00000004332	smg5	98	75.253	ENSPLAG00000009332	smg5	97	74.747	Poecilia_latipinna
ENSNBRG00000004332	smg5	98	81.972	ENSPMEG00000014105	smg5	97	80.876	Poecilia_mexicana
ENSNBRG00000004332	smg5	98	75.253	ENSPREG00000017713	smg5	97	75.092	Poecilia_reticulata
ENSNBRG00000004332	smg5	98	65.000	ENSPPYG00000000723	SMG5	97	63.063	Pongo_abelii
ENSNBRG00000004332	smg5	77	79.444	ENSPCAG00000008412	SMG5	81	79.444	Procavia_capensis
ENSNBRG00000004332	smg5	98	64.286	ENSPCOG00000004741	SMG5	96	63.535	Propithecus_coquereli
ENSNBRG00000004332	smg5	98	56.942	ENSPVAG00000016748	SMG5	97	57.085	Pteropus_vampyrus
ENSNBRG00000004332	smg5	97	79.890	ENSPNYG00000013397	smg5	97	81.079	Pundamilia_nyererei
ENSNBRG00000004332	smg5	98	71.495	ENSPNAG00000028363	smg5	97	71.667	Pygocentrus_nattereri
ENSNBRG00000004332	smg5	98	63.783	ENSRNOG00000019590	Smg5	96	62.866	Rattus_norvegicus
ENSNBRG00000004332	smg5	98	64.293	ENSRBIG00000027428	SMG5	97	63.163	Rhinopithecus_bieti
ENSNBRG00000004332	smg5	98	64.193	ENSRROG00000030035	SMG5	97	62.937	Rhinopithecus_roxellana
ENSNBRG00000004332	smg5	98	64.193	ENSSBOG00000033339	SMG5	97	63.444	Saimiri_boliviensis_boliviensis
ENSNBRG00000004332	smg5	97	31.485	ENSSHAG00000009572	-	76	41.646	Sarcophilus_harrisii
ENSNBRG00000004332	smg5	96	63.636	ENSSHAG00000014163	SMG5	97	62.717	Sarcophilus_harrisii
ENSNBRG00000004332	smg5	98	75.709	ENSSFOG00015024175	smg5	97	75.177	Scleropages_formosus
ENSNBRG00000004332	smg5	97	76.125	ENSSMAG00000013059	smg5	97	75.849	Scophthalmus_maximus
ENSNBRG00000004332	smg5	97	76.825	ENSSDUG00000007122	smg5	97	76.916	Seriola_dumerili
ENSNBRG00000004332	smg5	98	79.415	ENSSLDG00000011418	smg5	96	79.314	Seriola_lalandi_dorsalis
ENSNBRG00000004332	smg5	90	56.061	ENSSARG00000012484	SMG5	99	54.585	Sorex_araneus
ENSNBRG00000004332	smg5	91	61.880	ENSSPUG00000002260	SMG5	97	61.983	Sphenodon_punctatus
ENSNBRG00000004332	smg5	96	84.074	ENSSPAG00000014266	smg5	95	83.848	Stegastes_partitus
ENSNBRG00000004332	smg5	98	64.422	ENSSSCG00000006490	-	97	63.380	Sus_scrofa
ENSNBRG00000004332	smg5	97	51.493	ENSSSCG00000039308	-	95	50.463	Sus_scrofa
ENSNBRG00000004332	smg5	97	65.832	ENSTGUG00000003748	-	96	64.393	Taeniopygia_guttata
ENSNBRG00000004332	smg5	99	76.143	ENSTRUG00000012580	smg5	97	75.646	Takifugu_rubripes
ENSNBRG00000004332	smg5	98	76.809	ENSTNIG00000010303	smg5	97	75.719	Tetraodon_nigroviridis
ENSNBRG00000004332	smg5	55	84.236	ENSTBEG00000002777	SMG5	55	84.236	Tupaia_belangeri
ENSNBRG00000004332	smg5	98	60.000	ENSTTRG00000001401	SMG5	97	59.215	Tursiops_truncatus
ENSNBRG00000004332	smg5	97	62.765	ENSUAMG00000013721	SMG5	96	62.802	Ursus_americanus
ENSNBRG00000004332	smg5	98	58.593	ENSUMAG00000018041	SMG5	85	76.608	Ursus_maritimus
ENSNBRG00000004332	smg5	87	75.439	ENSVPAG00000009446	SMG5	86	75.439	Vicugna_pacos
ENSNBRG00000004332	smg5	98	63.572	ENSVVUG00000005887	SMG5	96	62.993	Vulpes_vulpes
ENSNBRG00000004332	smg5	74	57.614	ENSXETG00000033791	SMG5	97	54.476	Xenopus_tropicalis
ENSNBRG00000004332	smg5	78	95.918	ENSXCOG00000004379	smg5	92	95.918	Xiphophorus_couchianus
ENSNBRG00000004332	smg5	98	81.754	ENSXMAG00000013499	smg5	97	81.496	Xiphophorus_maculatus