EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004381 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4567 bases
Position: chrJH422274.1:7180752-7185318
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005536	zf-C2H2	PF00096.26	3.2e-28	1	4
ENSNBRP00000005536	zf-C2H2	PF00096.26	3.2e-28	2	4
ENSNBRP00000005536	zf-C2H2	PF00096.26	3.2e-28	3	4
ENSNBRP00000005536	zf-C2H2	PF00096.26	3.2e-28	4	4
ENSNBRP00000005557	zf-C2H2	PF00096.26	5e-15	1	3
ENSNBRP00000005557	zf-C2H2	PF00096.26	5e-15	2	3
ENSNBRP00000005557	zf-C2H2	PF00096.26	5e-15	3	3
ENSNBRP00000005536	zf-met	PF12874.7	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005702	-	924	-	ENSNBRP00000005536	307 (aa)	-	-
ENSNBRT00000005723	-	447	-	ENSNBRP00000005557	148 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000004381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004381	-	83	45.128	ENSNBRG00000000523	-	65	50.909
ENSNBRG00000004381	-	98	49.038	ENSNBRG00000003124	-	91	49.438
ENSNBRG00000004381	-	79	43.478	ENSNBRG00000008123	-	79	43.478
ENSNBRG00000004381	-	77	47.423	ENSNBRG00000024020	-	55	47.423
ENSNBRG00000004381	-	86	34.234	ENSNBRG00000022534	znf646	74	34.234
ENSNBRG00000004381	-	74	36.000	ENSNBRG00000014403	-	56	36.000
ENSNBRG00000004381	-	76	42.718	ENSNBRG00000016582	-	84	43.860
ENSNBRG00000004381	-	87	41.711	ENSNBRG00000002542	-	82	45.745
ENSNBRG00000004381	-	74	42.529	ENSNBRG00000003394	-	51	41.509
ENSNBRG00000004381	-	77	40.678	ENSNBRG00000016032	patz1	50	31.690
ENSNBRG00000004381	-	99	38.462	ENSNBRG00000021967	-	73	38.462
ENSNBRG00000004381	-	78	45.614	ENSNBRG00000023956	-	58	45.614
ENSNBRG00000004381	-	81	48.182	ENSNBRG00000015652	-	95	46.154
ENSNBRG00000004381	-	93	50.909	ENSNBRG00000016282	-	91	50.909
ENSNBRG00000004381	-	93	40.870	ENSNBRG00000005805	-	99	40.870
ENSNBRG00000004381	-	76	49.091	ENSNBRG00000000577	-	82	46.667
ENSNBRG00000004381	-	74	43.333	ENSNBRG00000012391	gfi1b	56	39.759
ENSNBRG00000004381	-	76	48.485	ENSNBRG00000000305	-	75	48.485
ENSNBRG00000004381	-	76	44.565	ENSNBRG00000021998	-	65	41.860
ENSNBRG00000004381	-	79	46.364	ENSNBRG00000024014	-	68	41.500
ENSNBRG00000004381	-	87	45.217	ENSNBRG00000024019	-	89	45.217
ENSNBRG00000004381	-	87	47.674	ENSNBRG00000016603	-	92	47.674
ENSNBRG00000004381	-	74	46.364	ENSNBRG00000021237	-	89	36.905
ENSNBRG00000004381	-	78	42.157	ENSNBRG00000005849	-	86	42.157
ENSNBRG00000004381	-	88	40.796	ENSNBRG00000016577	si:dkey-182i3.9	90	43.636
ENSNBRG00000004381	-	78	46.429	ENSNBRG00000001641	-	71	46.429
ENSNBRG00000004381	-	95	48.333	ENSNBRG00000009075	znf236	79	34.694
ENSNBRG00000004381	-	84	50.000	ENSNBRG00000013604	-	80	43.846
ENSNBRG00000004381	-	76	45.946	ENSNBRG00000005796	-	87	45.946
ENSNBRG00000004381	-	76	51.818	ENSNBRG00000004822	-	50	51.818
ENSNBRG00000004381	-	84	53.030	ENSNBRG00000013583	-	90	53.030
ENSNBRG00000004381	-	91	50.000	ENSNBRG00000014088	-	99	48.598
ENSNBRG00000004381	-	78	51.613	ENSNBRG00000013838	-	50	39.130
ENSNBRG00000004381	-	76	49.091	ENSNBRG00000001761	-	52	41.379
ENSNBRG00000004381	-	76	45.455	ENSNBRG00000024048	-	82	45.455
ENSNBRG00000004381	-	74	55.056	ENSNBRG00000013501	-	77	55.056
ENSNBRG00000004381	-	74	50.562	ENSNBRG00000010194	-	60	50.562
ENSNBRG00000004381	-	88	41.758	ENSNBRG00000009815	-	89	40.252
ENSNBRG00000004381	-	75	39.560	ENSNBRG00000010351	-	88	39.048
ENSNBRG00000004381	-	87	51.471	ENSNBRG00000000708	-	84	51.471
ENSNBRG00000004381	-	78	49.451	ENSNBRG00000019987	GZF1	51	34.274
ENSNBRG00000004381	-	71	32.283	ENSNBRG00000012376	-	99	33.835
ENSNBRG00000004381	-	77	36.735	ENSNBRG00000005175	zbtb41	65	36.735
ENSNBRG00000004381	-	81	43.689	ENSNBRG00000024293	-	84	43.689
ENSNBRG00000004381	-	77	47.778	ENSNBRG00000015442	ZNF319	87	36.937
ENSNBRG00000004381	-	76	50.000	ENSNBRG00000024345	-	87	50.000
ENSNBRG00000004381	-	76	50.980	ENSNBRG00000024344	-	72	48.182
ENSNBRG00000004381	-	74	55.263	ENSNBRG00000015873	-	94	50.575
ENSNBRG00000004381	-	78	49.180	ENSNBRG00000024179	-	64	49.180
ENSNBRG00000004381	-	76	48.718	ENSNBRG00000022241	-	80	48.718
ENSNBRG00000004381	-	89	42.697	ENSNBRG00000006757	-	70	47.115
ENSNBRG00000004381	-	74	51.899	ENSNBRG00000023229	-	75	51.899
ENSNBRG00000004381	-	77	53.333	ENSNBRG00000000492	-	65	53.333
ENSNBRG00000004381	-	83	41.818	ENSNBRG00000004557	-	85	39.908
ENSNBRG00000004381	-	77	50.000	ENSNBRG00000007384	-	51	50.000
ENSNBRG00000004381	-	82	50.649	ENSNBRG00000001163	-	91	50.649
ENSNBRG00000004381	-	77	44.643	ENSNBRG00000005823	-	86	40.092
ENSNBRG00000004381	-	89	47.475	ENSNBRG00000019481	-	92	47.475
ENSNBRG00000004381	-	77	46.154	ENSNBRG00000004792	-	57	46.154
ENSNBRG00000004381	-	77	39.623	ENSNBRG00000009811	-	94	36.154
ENSNBRG00000004381	-	76	38.261	ENSNBRG00000013983	scrt1b	50	38.261
ENSNBRG00000004381	-	76	53.922	ENSNBRG00000007311	-	76	53.922
ENSNBRG00000004381	-	77	39.175	ENSNBRG00000001834	-	100	36.752
ENSNBRG00000004381	-	91	43.363	ENSNBRG00000016550	-	85	43.363
ENSNBRG00000004381	-	79	43.860	ENSNBRG00000004523	-	93	43.860
ENSNBRG00000004381	-	92	40.196	ENSNBRG00000024066	-	85	46.392
ENSNBRG00000004381	-	76	46.939	ENSNBRG00000006411	-	89	36.154
ENSNBRG00000004381	-	84	50.685	ENSNBRG00000002902	-	97	50.685
ENSNBRG00000004381	-	84	44.444	ENSNBRG00000004976	prdm5	71	44.444
ENSNBRG00000004381	-	76	44.211	ENSNBRG00000024294	-	74	41.481
ENSNBRG00000004381	-	78	43.678	ENSNBRG00000002946	-	50	43.678
ENSNBRG00000004381	-	76	37.391	ENSNBRG00000011785	snai2	57	37.121
ENSNBRG00000004381	-	81	40.860	ENSNBRG00000004723	-	88	40.860
ENSNBRG00000004381	-	74	55.556	ENSNBRG00000019770	-	92	48.624
ENSNBRG00000004381	-	82	52.727	ENSNBRG00000000960	-	99	50.000
ENSNBRG00000004381	-	84	52.941	ENSNBRG00000016169	-	66	52.941
ENSNBRG00000004381	-	86	45.192	ENSNBRG00000024054	-	57	40.639
ENSNBRG00000004381	-	76	42.202	ENSNBRG00000024051	-	51	42.202
ENSNBRG00000004381	-	73	47.170	ENSNBRG00000009279	-	88	47.170
ENSNBRG00000004381	-	75	45.588	ENSNBRG00000010987	-	72	45.833
ENSNBRG00000004381	-	76	42.342	ENSNBRG00000001608	-	93	42.342
ENSNBRG00000004381	-	95	52.679	ENSNBRG00000006125	-	97	52.679
ENSNBRG00000004381	-	76	49.533	ENSNBRG00000016219	-	85	49.533
ENSNBRG00000004381	-	84	43.750	ENSNBRG00000003250	-	92	43.750
ENSNBRG00000004381	-	74	52.941	ENSNBRG00000010405	-	84	52.941
ENSNBRG00000004381	-	76	46.392	ENSNBRG00000024086	-	57	46.392
ENSNBRG00000004381	-	75	41.441	ENSNBRG00000007276	-	53	41.441
ENSNBRG00000004381	-	78	45.098	ENSNBRG00000020159	znf526	53	35.349
ENSNBRG00000004381	-	76	45.556	ENSNBRG00000019004	-	65	45.570
ENSNBRG00000004381	-	78	47.191	ENSNBRG00000008106	-	94	47.191
ENSNBRG00000004381	-	91	42.342	ENSNBRG00000016564	-	82	42.342
ENSNBRG00000004381	-	84	42.500	ENSNBRG00000008223	-	85	36.585
ENSNBRG00000004381	-	81	38.235	ENSNBRG00000018141	-	52	38.235
ENSNBRG00000004381	-	88	34.014	ENSNBRG00000007221	scrt2	73	34.014
ENSNBRG00000004381	-	78	43.137	ENSNBRG00000009128	-	56	41.667
ENSNBRG00000004381	-	80	52.874	ENSNBRG00000000321	-	98	52.874
ENSNBRG00000004381	-	74	48.980	ENSNBRG00000000793	-	98	48.980
ENSNBRG00000004381	-	93	47.368	ENSNBRG00000016666	-	96	49.558
ENSNBRG00000004381	-	77	44.444	ENSNBRG00000008827	znf319b	83	44.444
ENSNBRG00000004381	-	78	43.137	ENSNBRG00000018718	zbtb47b	78	37.594
ENSNBRG00000004381	-	84	48.182	ENSNBRG00000016234	-	68	48.182
ENSNBRG00000004381	-	76	43.182	ENSNBRG00000023960	-	69	37.931
ENSNBRG00000004381	-	78	54.286	ENSNBRG00000024354	-	91	54.286
ENSNBRG00000004381	-	82	44.828	ENSNBRG00000003000	-	80	44.828
ENSNBRG00000004381	-	76	48.696	ENSNBRG00000007602	-	79	48.696
ENSNBRG00000004381	-	74	46.364	ENSNBRG00000021355	-	91	46.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004381	-	75	46.847	ENSAPOG00000021496	-	52	46.847	Acanthochromis_polyacanthus
ENSNBRG00000004381	-	77	43.396	ENSAPOG00000000128	-	59	37.129	Acanthochromis_polyacanthus
ENSNBRG00000004381	-	88	43.103	ENSACIG00000016133	-	56	43.103	Amphilophus_citrinellus
ENSNBRG00000004381	-	76	45.536	ENSAPEG00000010478	-	51	38.498	Amphiprion_percula
ENSNBRG00000004381	-	76	46.392	ENSAPEG00000011635	-	59	43.636	Amphiprion_percula
ENSNBRG00000004381	-	77	42.254	ENSATEG00000022022	-	92	41.379	Anabas_testudineus
ENSNBRG00000004381	-	71	36.719	ENSATEG00000015828	-	71	36.719	Anabas_testudineus
ENSNBRG00000004381	-	75	45.946	ENSATEG00000024551	-	75	35.745	Anabas_testudineus
ENSNBRG00000004381	-	76	45.055	ENSATEG00000011235	-	61	38.378	Anabas_testudineus
ENSNBRG00000004381	-	83	47.115	ENSATEG00000011202	-	68	42.466	Anabas_testudineus
ENSNBRG00000004381	-	74	44.545	ENSCVAG00000003630	-	55	44.545	Cyprinodon_variegatus
ENSNBRG00000004381	-	76	43.750	ENSCVAG00000004508	-	63	36.916	Cyprinodon_variegatus
ENSNBRG00000004381	-	77	39.623	ENSHBUG00000000731	-	60	35.371	Haplochromis_burtoni
ENSNBRG00000004381	-	81	38.298	ENSHBUG00000002878	-	57	38.298	Haplochromis_burtoni
ENSNBRG00000004381	-	76	46.914	ENSHCOG00000008205	-	77	46.914	Hippocampus_comes
ENSNBRG00000004381	-	74	42.683	ENSKMAG00000019912	-	56	37.278	Kryptolebias_marmoratus
ENSNBRG00000004381	-	74	43.011	ENSKMAG00000000520	-	54	43.011	Kryptolebias_marmoratus
ENSNBRG00000004381	-	77	41.509	ENSLBEG00000014676	-	55	34.081	Labrus_bergylta
ENSNBRG00000004381	-	76	42.857	ENSLBEG00000011006	-	50	42.857	Labrus_bergylta
ENSNBRG00000004381	-	76	42.574	ENSMAMG00000022152	-	63	35.887	Mastacembelus_armatus
ENSNBRG00000004381	-	77	39.623	ENSMZEG00005004047	-	60	35.371	Maylandia_zebra
ENSNBRG00000004381	-	80	82.449	ENSMALG00000014761	-	68	83.051	Monopterus_albus
ENSNBRG00000004381	-	79	47.059	ENSORLG00000025719	-	58	47.059	Oryzias_latipes
ENSNBRG00000004381	-	77	40.984	ENSORLG00020009554	-	78	40.984	Oryzias_latipes_hni
ENSNBRG00000004381	-	78	41.463	ENSORLG00020005815	-	82	32.727	Oryzias_latipes_hni
ENSNBRG00000004381	-	79	47.059	ENSORLG00015012599	-	58	47.059	Oryzias_latipes_hsok
ENSNBRG00000004381	-	80	44.944	ENSOMEG00000010906	-	68	40.741	Oryzias_melastigma
ENSNBRG00000004381	-	71	36.697	ENSOMEG00000015640	-	70	40.964	Oryzias_melastigma
ENSNBRG00000004381	-	74	51.613	ENSPFOG00000012948	-	61	32.500	Poecilia_formosa
ENSNBRG00000004381	-	97	39.785	ENSPLAG00000009651	-	72	42.857	Poecilia_latipinna
ENSNBRG00000004381	-	99	40.708	ENSPMEG00000023113	-	70	35.802	Poecilia_mexicana
ENSNBRG00000004381	-	75	45.045	ENSPREG00000004006	-	53	45.045	Poecilia_reticulata
ENSNBRG00000004381	-	75	43.617	ENSPREG00000016270	-	77	43.617	Poecilia_reticulata
ENSNBRG00000004381	-	82	40.909	ENSPREG00000000853	-	52	43.478	Poecilia_reticulata
ENSNBRG00000004381	-	85	41.558	ENSPNYG00000019187	-	96	41.714	Pundamilia_nyererei
ENSNBRG00000004381	-	76	43.678	ENSPNYG00000023882	-	70	38.068	Pundamilia_nyererei
ENSNBRG00000004381	-	78	47.423	ENSPNAG00000010317	-	90	40.092	Pygocentrus_nattereri
ENSNBRG00000004381	-	76	43.158	ENSSLDG00000007568	-	85	41.071	Seriola_lalandi_dorsalis
ENSNBRG00000004381	-	76	45.536	ENSSPAG00000010524	-	52	38.498	Stegastes_partitus
ENSNBRG00000004381	-	74	46.364	ENSSPAG00000021950	-	56	43.353	Stegastes_partitus
ENSNBRG00000004381	-	76	50.000	ENSXETG00000002690	-	54	50.000	Xenopus_tropicalis
ENSNBRG00000004381	-	74	50.877	ENSXCOG00000018315	-	88	47.297	Xiphophorus_couchianus