EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000004438 (Gene tree)
Gene ID: 102780510
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain-containing protein 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 8228 bases
Position: chrJH422295.1:6636887-6645114
Accession: 102780510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005604	R3H	PF01424.22	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005770	-	3094	XM_006792033	ENSNBRP00000005604	256 (aa)	XP_006792096	UPI0003EC131A

Gene Model

Click here to download ENSNBRG00000004438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004438	r3hdm4	91	56.904	ENSG00000198858	R3HDM4	90	56.444	Homo_sapiens
ENSNBRG00000004438	r3hdm4	91	57.741	ENSAMEG00000003001	R3HDM4	97	57.563	Ailuropoda_melanoleuca
ENSNBRG00000004438	r3hdm4	100	93.359	ENSACIG00000004672	r3hdm4	100	93.359	Amphilophus_citrinellus
ENSNBRG00000004438	r3hdm4	98	89.286	ENSATEG00000015913	r3hdm4	99	89.286	Anabas_testudineus
ENSNBRG00000004438	r3hdm4	91	57.741	ENSANAG00000029748	R3HDM4	98	56.485	Aotus_nancymaae
ENSNBRG00000004438	r3hdm4	91	57.322	ENSBTAG00000046406	R3HDM4	88	56.067	Bos_taurus
ENSNBRG00000004438	r3hdm4	93	56.225	ENSCJAG00000020114	R3HDM4	92	55.020	Callithrix_jacchus
ENSNBRG00000004438	r3hdm4	91	57.741	ENSCAFG00000019665	R3HDM4	87	56.485	Canis_familiaris
ENSNBRG00000004438	r3hdm4	91	58.159	ENSCAFG00020016880	R3HDM4	87	56.904	Canis_lupus_dingo
ENSNBRG00000004438	r3hdm4	91	57.741	ENSCHIG00000020110	R3HDM4	91	56.485	Capra_hircus
ENSNBRG00000004438	r3hdm4	91	57.322	ENSCCAG00000019955	R3HDM4	86	56.485	Cebus_capucinus
ENSNBRG00000004438	r3hdm4	91	56.846	ENSCATG00000037269	R3HDM4	89	55.000	Cercocebus_atys
ENSNBRG00000004438	r3hdm4	91	55.462	ENSCLAG00000007094	R3HDM4	97	54.202	Chinchilla_lanigera
ENSNBRG00000004438	r3hdm4	91	57.143	ENSCSAG00000012574	R3HDM4	88	57.143	Chlorocebus_sabaeus
ENSNBRG00000004438	r3hdm4	100	62.030	ENSCPBG00000009805	R3HDM4	100	61.654	Chrysemys_picta_bellii
ENSNBRG00000004438	r3hdm4	91	57.143	ENSCANG00000040439	R3HDM4	83	57.143	Colobus_angolensis_palliatus
ENSNBRG00000004438	r3hdm4	91	55.696	ENSCGRG00001021650	R3hdm4	89	55.696	Cricetulus_griseus_chok1gshd
ENSNBRG00000004438	r3hdm4	91	55.696	ENSCGRG00000013169	R3hdm4	89	55.696	Cricetulus_griseus_crigri
ENSNBRG00000004438	r3hdm4	100	78.516	ENSCSEG00000018211	r3hdm4	100	78.516	Cynoglossus_semilaevis
ENSNBRG00000004438	r3hdm4	100	87.500	ENSCVAG00000017127	r3hdm4	100	87.500	Cyprinodon_variegatus
ENSNBRG00000004438	r3hdm4	90	56.067	ENSDORG00000006605	R3hdm4	96	56.067	Dipodomys_ordii
ENSNBRG00000004438	r3hdm4	91	56.485	ENSEASG00005021556	R3HDM4	86	55.230	Equus_asinus_asinus
ENSNBRG00000004438	r3hdm4	91	56.485	ENSECAG00000000003	R3HDM4	87	55.230	Equus_caballus
ENSNBRG00000004438	r3hdm4	91	56.904	ENSFCAG00000042437	R3HDM4	88	55.649	Felis_catus
ENSNBRG00000004438	r3hdm4	91	65.254	ENSFALG00000013938	R3HDM4	97	64.255	Ficedula_albicollis
ENSNBRG00000004438	r3hdm4	91	55.882	ENSFDAG00000017040	R3HDM4	97	55.882	Fukomys_damarensis
ENSNBRG00000004438	r3hdm4	100	86.719	ENSFHEG00000017636	r3hdm4	100	86.719	Fundulus_heteroclitus
ENSNBRG00000004438	r3hdm4	95	71.488	ENSGMOG00000001231	r3hdm4	100	71.901	Gadus_morhua
ENSNBRG00000004438	r3hdm4	91	63.025	ENSGALG00000001998	R3HDM4	90	62.605	Gallus_gallus
ENSNBRG00000004438	r3hdm4	100	85.938	ENSGAFG00000004173	r3hdm4	100	85.938	Gambusia_affinis
ENSNBRG00000004438	r3hdm4	100	61.654	ENSGAGG00000019698	R3HDM4	100	61.278	Gopherus_agassizii
ENSNBRG00000004438	r3hdm4	91	56.904	ENSGGOG00000008040	R3HDM4	97	55.649	Gorilla_gorilla
ENSNBRG00000004438	r3hdm4	100	99.219	ENSHBUG00000014810	r3hdm4	100	99.219	Haplochromis_burtoni
ENSNBRG00000004438	r3hdm4	91	54.622	ENSHGLG00000016194	R3HDM4	88	53.975	Heterocephalus_glaber_female
ENSNBRG00000004438	r3hdm4	99	82.745	ENSHCOG00000008422	r3hdm4	99	82.745	Hippocampus_comes
ENSNBRG00000004438	r3hdm4	100	69.767	ENSIPUG00000006716	r3hdm4	100	69.767	Ictalurus_punctatus
ENSNBRG00000004438	r3hdm4	91	54.622	ENSSTOG00000023015	R3HDM4	97	53.556	Ictidomys_tridecemlineatus
ENSNBRG00000004438	r3hdm4	90	55.696	ENSJJAG00000012475	R3hdm4	89	55.085	Jaculus_jaculus
ENSNBRG00000004438	r3hdm4	100	86.719	ENSKMAG00000005853	r3hdm4	100	86.719	Kryptolebias_marmoratus
ENSNBRG00000004438	r3hdm4	100	87.500	ENSLBEG00000000730	r3hdm4	100	87.500	Labrus_bergylta
ENSNBRG00000004438	r3hdm4	100	59.924	ENSLACG00000016445	R3HDM4	100	59.924	Latimeria_chalumnae
ENSNBRG00000004438	r3hdm4	100	69.084	ENSLOCG00000002423	r3hdm4	100	68.966	Lepisosteus_oculatus
ENSNBRG00000004438	r3hdm4	91	56.962	ENSLAFG00000017796	R3HDM4	91	55.696	Loxodonta_africana
ENSNBRG00000004438	r3hdm4	91	57.563	ENSMFAG00000044131	R3HDM4	88	57.563	Macaca_fascicularis
ENSNBRG00000004438	r3hdm4	86	58.482	ENSMMUG00000009682	R3HDM4	90	58.482	Macaca_mulatta
ENSNBRG00000004438	r3hdm4	91	57.563	ENSMNEG00000044115	R3HDM4	96	57.563	Macaca_nemestrina
ENSNBRG00000004438	r3hdm4	92	56.557	ENSMLEG00000035693	R3HDM4	89	54.733	Mandrillus_leucophaeus
ENSNBRG00000004438	r3hdm4	87	88.341	ENSMAMG00000005652	r3hdm4	91	88.341	Mastacembelus_armatus
ENSNBRG00000004438	r3hdm4	91	55.274	ENSMAUG00000010611	R3hdm4	90	55.983	Mesocricetus_auratus
ENSNBRG00000004438	r3hdm4	91	56.485	ENSMICG00000010124	R3HDM4	88	55.230	Microcebus_murinus
ENSNBRG00000004438	r3hdm4	91	55.319	ENSMOCG00000002646	R3hdm4	89	54.894	Microtus_ochrogaster
ENSNBRG00000004438	r3hdm4	100	85.547	ENSMMOG00000008253	r3hdm4	100	85.547	Mola_mola
ENSNBRG00000004438	r3hdm4	89	59.740	ENSMODG00000005698	R3HDM4	99	59.565	Monodelphis_domestica
ENSNBRG00000004438	r3hdm4	100	85.547	ENSMALG00000018856	r3hdm4	100	85.547	Monopterus_albus
ENSNBRG00000004438	r3hdm4	99	50.951	MGP_CAROLIEiJ_G0015551	R3hdm4	99	50.570	Mus_caroli
ENSNBRG00000004438	r3hdm4	90	55.603	ENSMUSG00000035781	R3hdm4	89	54.741	Mus_musculus
ENSNBRG00000004438	r3hdm4	91	54.468	MGP_PahariEiJ_G0030964	R3hdm4	89	54.043	Mus_pahari
ENSNBRG00000004438	r3hdm4	99	52.091	MGP_SPRETEiJ_G0016369	-	84	51.331	Mus_spretus
ENSNBRG00000004438	r3hdm4	93	58.848	ENSMPUG00000009394	R3HDM4	90	58.678	Mustela_putorius_furo
ENSNBRG00000004438	r3hdm4	86	53.680	ENSNLEG00000001022	R3HDM4	99	52.381	Nomascus_leucogenys
ENSNBRG00000004438	r3hdm4	91	58.475	ENSMEUG00000011020	R3HDM4	99	58.475	Notamacropus_eugenii
ENSNBRG00000004438	r3hdm4	91	56.723	ENSODEG00000011745	R3HDM4	88	55.462	Octodon_degus
ENSNBRG00000004438	r3hdm4	100	98.438	ENSONIG00000012675	r3hdm4	92	98.438	Oreochromis_niloticus
ENSNBRG00000004438	r3hdm4	100	85.156	ENSOMEG00000003005	r3hdm4	100	85.156	Oryzias_melastigma
ENSNBRG00000004438	r3hdm4	91	56.356	ENSOGAG00000025656	R3HDM4	89	56.356	Otolemur_garnettii
ENSNBRG00000004438	r3hdm4	91	56.904	ENSOARG00000009945	R3HDM4	97	55.649	Ovis_aries
ENSNBRG00000004438	r3hdm4	91	56.904	ENSPPAG00000042371	R3HDM4	97	55.649	Pan_paniscus
ENSNBRG00000004438	r3hdm4	91	57.563	ENSPANG00000015203	R3HDM4	88	57.563	Papio_anubis
ENSNBRG00000004438	r3hdm4	100	68.321	ENSPKIG00000007421	r3hdm4	100	69.466	Paramormyrops_kingsleyae
ENSNBRG00000004438	r3hdm4	100	75.097	ENSPMGG00000020467	r3hdm4	100	75.097	Periophthalmus_magnuspinnatus
ENSNBRG00000004438	r3hdm4	91	56.596	ENSPEMG00000008365	Tmem259	97	55.745	Peromyscus_maniculatus_bairdii
ENSNBRG00000004438	r3hdm4	100	84.766	ENSPFOG00000003199	r3hdm4	100	84.766	Poecilia_formosa
ENSNBRG00000004438	r3hdm4	100	84.375	ENSPMEG00000014183	r3hdm4	100	84.375	Poecilia_mexicana
ENSNBRG00000004438	r3hdm4	100	85.156	ENSPREG00000010709	r3hdm4	100	85.156	Poecilia_reticulata
ENSNBRG00000004438	r3hdm4	91	56.962	ENSPPYG00000009297	R3HDM4	88	55.696	Pongo_abelii
ENSNBRG00000004438	r3hdm4	58	58.278	ENSPCAG00000010997	R3HDM4	55	56.291	Procavia_capensis
ENSNBRG00000004438	r3hdm4	91	57.741	ENSPCOG00000016785	R3HDM4	88	56.485	Propithecus_coquereli
ENSNBRG00000004438	r3hdm4	100	99.219	ENSPNYG00000017489	r3hdm4	100	99.219	Pundamilia_nyererei
ENSNBRG00000004438	r3hdm4	91	54.894	ENSRNOG00000011489	R3hdm4	89	54.468	Rattus_norvegicus
ENSNBRG00000004438	r3hdm4	91	57.563	ENSRROG00000028842	R3HDM4	88	57.563	Rhinopithecus_roxellana
ENSNBRG00000004438	r3hdm4	91	56.198	ENSSBOG00000019298	R3HDM4	70	55.372	Saimiri_boliviensis_boliviensis
ENSNBRG00000004438	r3hdm4	56	62.585	ENSSHAG00000003036	-	79	65.217	Sarcophilus_harrisii
ENSNBRG00000004438	r3hdm4	97	74.597	ENSSFOG00015020574	r3hdm4	92	74.104	Scleropages_formosus
ENSNBRG00000004438	r3hdm4	100	86.719	ENSSMAG00000021090	r3hdm4	74	86.719	Scophthalmus_maximus
ENSNBRG00000004438	r3hdm4	100	92.188	ENSSDUG00000008488	r3hdm4	100	92.188	Seriola_dumerili
ENSNBRG00000004438	r3hdm4	100	91.797	ENSSLDG00000025328	r3hdm4	100	91.797	Seriola_lalandi_dorsalis
ENSNBRG00000004438	r3hdm4	91	62.447	ENSSPUG00000005434	R3HDM4	92	62.447	Sphenodon_punctatus
ENSNBRG00000004438	r3hdm4	99	83.203	ENSSPAG00000002562	r3hdm4	99	83.203	Stegastes_partitus
ENSNBRG00000004438	r3hdm4	91	57.322	ENSSSCG00000013419	R3HDM4	87	56.067	Sus_scrofa
ENSNBRG00000004438	r3hdm4	78	55.825	ENSTGUG00000000663	R3HDM4	98	56.098	Taeniopygia_guttata
ENSNBRG00000004438	r3hdm4	91	58.051	ENSTTRG00000001470	R3HDM4	97	56.780	Tursiops_truncatus
ENSNBRG00000004438	r3hdm4	86	58.667	ENSUAMG00000005751	R3HDM4	100	58.482	Ursus_americanus
ENSNBRG00000004438	r3hdm4	91	57.741	ENSVVUG00000022685	R3HDM4	87	56.485	Vulpes_vulpes
ENSNBRG00000004438	r3hdm4	97	46.304	ENSXETG00000033624	R3HDM4	97	46.586	Xenopus_tropicalis
ENSNBRG00000004438	r3hdm4	100	83.658	ENSXCOG00000005127	r3hdm4	100	83.658	Xiphophorus_couchianus
ENSNBRG00000004438	r3hdm4	100	83.984	ENSXMAG00000022875	r3hdm4	100	83.984	Xiphophorus_maculatus