EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004463 (Gene tree)
Gene ID: 102786274
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7247 bases
Position: chrJH422315.1:265243-272489
Accession: 102786274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005700	ResIII	PF04851.15	5.1e-11	1	1
ENSNBRP00000005700	DEAD	PF00270.29	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005870	-	2988	XM_006796042	ENSNBRP00000005700	995 (aa)	XP_006796105	-

Gene Model

Click here to download ENSNBRG00000004463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004463	smarca5	61	34.663	ENSNBRG00000024242	hells	92	34.663
ENSNBRG00000004463	smarca5	54	40.217	ENSNBRG00000006021	chd1l	59	40.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004463	smarca5	99	83.131	ENSG00000102038	SMARCA1	93	83.809	Homo_sapiens
ENSNBRG00000004463	smarca5	99	98.390	ENSAPOG00000016035	smarca5	99	98.257	Acanthochromis_polyacanthus
ENSNBRG00000004463	smarca5	99	82.236	ENSAMEG00000015218	SMARCA1	93	82.797	Ailuropoda_melanoleuca
ENSNBRG00000004463	smarca5	91	99.556	ENSACIG00000016982	smarca5	100	99.556	Amphilophus_citrinellus
ENSNBRG00000004463	smarca5	99	98.390	ENSAOCG00000015578	smarca5	96	98.390	Amphiprion_ocellaris
ENSNBRG00000004463	smarca5	99	98.390	ENSAPEG00000011117	smarca5	99	98.582	Amphiprion_percula
ENSNBRG00000004463	smarca5	99	98.290	ENSATEG00000012894	smarca5	96	98.290	Anabas_testudineus
ENSNBRG00000004463	smarca5	98	84.521	ENSAPLG00000013149	SMARCA1	99	84.521	Anas_platyrhynchos
ENSNBRG00000004463	smarca5	99	84.701	ENSACAG00000011376	SMARCA1	94	85.031	Anolis_carolinensis
ENSNBRG00000004463	smarca5	99	78.283	ENSANAG00000023098	SMARCA1	93	78.921	Aotus_nancymaae
ENSNBRG00000004463	smarca5	100	99.899	ENSACLG00000025356	smarca5	96	99.899	Astatotilapia_calliptera
ENSNBRG00000004463	smarca5	99	94.058	ENSAMXG00000005709	smarca5	94	95.385	Astyanax_mexicanus
ENSNBRG00000004463	smarca5	93	84.962	ENSAMXG00000011227	smarca1	99	86.248	Astyanax_mexicanus
ENSNBRG00000004463	smarca5	98	83.486	ENSBTAG00000002292	SMARCA1	91	83.770	Bos_taurus
ENSNBRG00000004463	smarca5	99	63.819	WBGene00002169	isw-1	95	63.880	Caenorhabditis_elegans
ENSNBRG00000004463	smarca5	98	83.809	ENSCJAG00000002868	SMARCA1	93	83.809	Callithrix_jacchus
ENSNBRG00000004463	smarca5	99	73.883	ENSCAFG00000018673	SMARCA1	99	75.294	Canis_familiaris
ENSNBRG00000004463	smarca5	99	83.333	ENSCAFG00020001751	SMARCA1	93	83.910	Canis_lupus_dingo
ENSNBRG00000004463	smarca5	99	83.181	ENSCHIG00000009837	SMARCA1	92	83.503	Capra_hircus
ENSNBRG00000004463	smarca5	99	83.333	ENSTSYG00000004240	SMARCA1	94	84.794	Carlito_syrichta
ENSNBRG00000004463	smarca5	99	81.928	ENSCPOG00000013601	SMARCA1	93	82.490	Cavia_porcellus
ENSNBRG00000004463	smarca5	99	80.404	ENSCCAG00000030817	SMARCA1	93	81.059	Cebus_capucinus
ENSNBRG00000004463	smarca5	97	84.265	ENSCATG00000015921	SMARCA1	93	82.797	Cercocebus_atys
ENSNBRG00000004463	smarca5	99	82.560	ENSCLAG00000002171	SMARCA1	93	82.994	Chinchilla_lanigera
ENSNBRG00000004463	smarca5	99	83.131	ENSCSAG00000008460	SMARCA1	93	83.809	Chlorocebus_sabaeus
ENSNBRG00000004463	smarca5	99	84.397	ENSCPBG00000001146	SMARCA1	93	84.725	Chrysemys_picta_bellii
ENSNBRG00000004463	smarca5	99	74.203	ENSCING00000004110	swi/snf	98	75.076	Ciona_intestinalis
ENSNBRG00000004463	smarca5	99	73.700	ENSCSAVG00000004620	-	99	75.839	Ciona_savignyi
ENSNBRG00000004463	smarca5	99	83.232	ENSCANG00000007183	SMARCA1	93	83.910	Colobus_angolensis_palliatus
ENSNBRG00000004463	smarca5	99	82.359	ENSCGRG00001010776	Smarca1	93	82.790	Cricetulus_griseus_chok1gshd
ENSNBRG00000004463	smarca5	97	82.837	ENSCGRG00000015301	Smarca1	94	83.333	Cricetulus_griseus_crigri
ENSNBRG00000004463	smarca5	99	97.183	ENSCSEG00000000328	smarca5	96	97.183	Cynoglossus_semilaevis
ENSNBRG00000004463	smarca5	100	97.588	ENSCVAG00000008668	smarca5	99	97.403	Cyprinodon_variegatus
ENSNBRG00000004463	smarca5	99	94.064	ENSDARG00000052348	smarca5	95	94.705	Danio_rerio
ENSNBRG00000004463	smarca5	98	83.183	ENSDARG00000012776	smarca1	96	83.183	Danio_rerio
ENSNBRG00000004463	smarca5	97	84.298	ENSDNOG00000004315	SMARCA1	91	84.836	Dasypus_novemcinctus
ENSNBRG00000004463	smarca5	97	84.194	ENSDORG00000009270	Smarca1	90	84.730	Dipodomys_ordii
ENSNBRG00000004463	smarca5	97	75.667	FBgn0011604	Iswi	97	74.300	Drosophila_melanogaster
ENSNBRG00000004463	smarca5	82	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSNBRG00000004463	smarca5	98	82.600	ENSEBUG00000001239	smarca5	96	82.600	Eptatretus_burgeri
ENSNBRG00000004463	smarca5	99	78.614	ENSEASG00005008218	SMARCA1	99	79.757	Equus_asinus_asinus
ENSNBRG00000004463	smarca5	99	83.367	ENSECAG00000012106	SMARCA1	92	83.809	Equus_caballus
ENSNBRG00000004463	smarca5	80	84.106	ENSEEUG00000014927	SMARCA1	80	84.106	Erinaceus_europaeus
ENSNBRG00000004463	smarca5	98	84.529	ENSELUG00000010515	smarca1	95	85.647	Esox_lucius
ENSNBRG00000004463	smarca5	99	83.232	ENSFCAG00000018496	SMARCA1	93	83.809	Felis_catus
ENSNBRG00000004463	smarca5	92	85.777	ENSFALG00000000209	SMARCA1	98	85.777	Ficedula_albicollis
ENSNBRG00000004463	smarca5	97	82.720	ENSFDAG00000009818	SMARCA1	94	83.351	Fukomys_damarensis
ENSNBRG00000004463	smarca5	100	97.487	ENSFHEG00000007687	smarca5	95	97.487	Fundulus_heteroclitus
ENSNBRG00000004463	smarca5	96	85.432	ENSGALG00000008431	SMARCA1	95	85.432	Gallus_gallus
ENSNBRG00000004463	smarca5	100	97.990	ENSGAFG00000017731	smarca5	96	97.990	Gambusia_affinis
ENSNBRG00000004463	smarca5	97	84.979	ENSGAGG00000023575	SMARCA1	99	84.979	Gopherus_agassizii
ENSNBRG00000004463	smarca5	77	79.113	ENSGGOG00000012841	-	92	80.146	Gorilla_gorilla
ENSNBRG00000004463	smarca5	99	82.323	ENSHGLG00000003080	SMARCA1	93	82.892	Heterocephalus_glaber_female
ENSNBRG00000004463	smarca5	99	81.964	ENSHGLG00100001102	SMARCA1	99	82.389	Heterocephalus_glaber_male
ENSNBRG00000004463	smarca5	99	97.485	ENSHCOG00000005458	smarca5	96	97.485	Hippocampus_comes
ENSNBRG00000004463	smarca5	99	93.769	ENSIPUG00000005229	SMARCA5	99	93.769	Ictalurus_punctatus
ENSNBRG00000004463	smarca5	99	83.283	ENSIPUG00000016905	Smarca1	99	84.216	Ictalurus_punctatus
ENSNBRG00000004463	smarca5	99	83.131	ENSSTOG00000014524	SMARCA1	95	83.215	Ictidomys_tridecemlineatus
ENSNBRG00000004463	smarca5	99	81.846	ENSJJAG00000002593	Smarca1	93	82.270	Jaculus_jaculus
ENSNBRG00000004463	smarca5	100	97.487	ENSKMAG00000003777	smarca5	96	97.487	Kryptolebias_marmoratus
ENSNBRG00000004463	smarca5	99	96.177	ENSLBEG00000018112	smarca5	96	96.177	Labrus_bergylta
ENSNBRG00000004463	smarca5	94	96.047	ENSLBEG00000013295	SMARCA1	100	97.089	Labrus_bergylta
ENSNBRG00000004463	smarca5	97	85.670	ENSLACG00000016697	SMARCA1	95	85.670	Latimeria_chalumnae
ENSNBRG00000004463	smarca5	98	85.714	ENSLOCG00000014591	smarca1	95	85.714	Lepisosteus_oculatus
ENSNBRG00000004463	smarca5	99	81.928	ENSLAFG00000000896	SMARCA1	98	82.490	Loxodonta_africana
ENSNBRG00000004463	smarca5	99	83.131	ENSMFAG00000002117	SMARCA1	94	84.868	Macaca_fascicularis
ENSNBRG00000004463	smarca5	97	84.265	ENSMMUG00000008818	SMARCA1	97	85.091	Macaca_mulatta
ENSNBRG00000004463	smarca5	97	84.265	ENSMNEG00000041768	SMARCA1	94	84.868	Macaca_nemestrina
ENSNBRG00000004463	smarca5	99	83.131	ENSMLEG00000043198	SMARCA1	93	83.809	Mandrillus_leucophaeus
ENSNBRG00000004463	smarca5	99	98.195	ENSMAMG00000014294	smarca5	96	98.195	Mastacembelus_armatus
ENSNBRG00000004463	smarca5	100	99.899	ENSMZEG00005009369	smarca5	96	99.899	Maylandia_zebra
ENSNBRG00000004463	smarca5	98	83.400	ENSMGAG00000007042	SMARCA1	98	83.400	Meleagris_gallopavo
ENSNBRG00000004463	smarca5	97	82.698	ENSMAUG00000008133	Smarca1	91	82.723	Mesocricetus_auratus
ENSNBRG00000004463	smarca5	99	83.535	ENSMICG00000015768	SMARCA1	93	84.114	Microcebus_murinus
ENSNBRG00000004463	smarca5	99	81.645	ENSMOCG00000009464	Smarca1	93	82.067	Microtus_ochrogaster
ENSNBRG00000004463	smarca5	99	96.479	ENSMMOG00000005547	smarca5	100	96.479	Mola_mola
ENSNBRG00000004463	smarca5	98	84.615	ENSMODG00000013187	-	94	84.615	Monodelphis_domestica
ENSNBRG00000004463	smarca5	100	98.092	ENSMALG00000002081	smarca5	98	96.945	Monopterus_albus
ENSNBRG00000004463	smarca5	99	81.809	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.706	Mus_caroli
ENSNBRG00000004463	smarca5	99	81.910	ENSMUSG00000031099	Smarca1	93	82.472	Mus_musculus
ENSNBRG00000004463	smarca5	99	82.085	MGP_PahariEiJ_G0031579	Smarca1	92	82.755	Mus_pahari
ENSNBRG00000004463	smarca5	99	82.046	MGP_SPRETEiJ_G0034192	Smarca1	93	82.472	Mus_spretus
ENSNBRG00000004463	smarca5	99	82.335	ENSMPUG00000017423	SMARCA1	88	82.897	Mustela_putorius_furo
ENSNBRG00000004463	smarca5	99	81.213	ENSMLUG00000029614	SMARCA1	93	81.426	Myotis_lucifugus
ENSNBRG00000004463	smarca5	97	83.213	ENSNGAG00000006492	Smarca1	91	83.246	Nannospalax_galili
ENSNBRG00000004463	smarca5	99	81.437	ENSNLEG00000015179	SMARCA1	94	84.144	Nomascus_leucogenys
ENSNBRG00000004463	smarca5	92	76.749	ENSMEUG00000008819	SMARCA1	97	76.749	Notamacropus_eugenii
ENSNBRG00000004463	smarca5	97	82.515	ENSODEG00000012163	SMARCA1	91	83.141	Octodon_degus
ENSNBRG00000004463	smarca5	100	99.899	ENSONIG00000009993	smarca5	96	99.899	Oreochromis_niloticus
ENSNBRG00000004463	smarca5	97	85.391	ENSOANG00000002862	SMARCA1	99	85.391	Ornithorhynchus_anatinus
ENSNBRG00000004463	smarca5	99	83.485	ENSOCUG00000001047	SMARCA1	93	83.809	Oryctolagus_cuniculus
ENSNBRG00000004463	smarca5	99	97.183	ENSORLG00000021998	smarca5	96	97.183	Oryzias_latipes
ENSNBRG00000004463	smarca5	99	97.284	ENSORLG00020017679	smarca5	96	97.284	Oryzias_latipes_hni
ENSNBRG00000004463	smarca5	99	97.384	ENSORLG00015017210	smarca5	96	97.384	Oryzias_latipes_hsok
ENSNBRG00000004463	smarca5	99	97.485	ENSOMEG00000000086	smarca5	96	97.485	Oryzias_melastigma
ENSNBRG00000004463	smarca5	97	83.778	ENSOGAG00000004399	SMARCA1	91	84.188	Otolemur_garnettii
ENSNBRG00000004463	smarca5	98	83.742	ENSOARG00000014638	SMARCA1	99	83.742	Ovis_aries
ENSNBRG00000004463	smarca5	99	83.131	ENSPPAG00000034647	SMARCA1	93	83.809	Pan_paniscus
ENSNBRG00000004463	smarca5	99	83.333	ENSPPRG00000008929	SMARCA1	93	83.910	Panthera_pardus
ENSNBRG00000004463	smarca5	99	81.430	ENSPTIG00000000915	SMARCA1	96	81.982	Panthera_tigris_altaica
ENSNBRG00000004463	smarca5	99	83.131	ENSPTRG00000049876	SMARCA1	93	82.797	Pan_troglodytes
ENSNBRG00000004463	smarca5	99	83.131	ENSPANG00000003871	SMARCA1	93	83.809	Papio_anubis
ENSNBRG00000004463	smarca5	97	82.341	ENSPKIG00000013411	smarca1	96	84.017	Paramormyrops_kingsleyae
ENSNBRG00000004463	smarca5	99	83.383	ENSPSIG00000010101	SMARCA1	99	84.979	Pelodiscus_sinensis
ENSNBRG00000004463	smarca5	97	83.145	ENSPEMG00000017503	Smarca1	91	83.037	Peromyscus_maniculatus_bairdii
ENSNBRG00000004463	smarca5	98	85.041	ENSPCIG00000015460	SMARCA1	96	85.041	Phascolarctos_cinereus
ENSNBRG00000004463	smarca5	100	97.990	ENSPFOG00000007649	smarca5	96	97.990	Poecilia_formosa
ENSNBRG00000004463	smarca5	100	97.990	ENSPLAG00000003363	smarca5	96	97.990	Poecilia_latipinna
ENSNBRG00000004463	smarca5	100	98.090	ENSPMEG00000019849	smarca5	96	98.090	Poecilia_mexicana
ENSNBRG00000004463	smarca5	100	98.090	ENSPREG00000023250	smarca5	96	98.090	Poecilia_reticulata
ENSNBRG00000004463	smarca5	99	80.303	ENSPPYG00000020703	SMARCA1	93	80.957	Pongo_abelii
ENSNBRG00000004463	smarca5	78	78.125	ENSPCOG00000020722	SMARCA1	93	80.712	Propithecus_coquereli
ENSNBRG00000004463	smarca5	91	83.871	ENSPVAG00000003805	SMARCA1	84	83.968	Pteropus_vampyrus
ENSNBRG00000004463	smarca5	61	100.000	ENSPNYG00000012299	smarca5	93	100.000	Pundamilia_nyererei
ENSNBRG00000004463	smarca5	99	82.157	ENSRNOG00000003762	Smarca1	93	82.587	Rattus_norvegicus
ENSNBRG00000004463	smarca5	99	83.232	ENSRROG00000034167	SMARCA1	93	83.910	Rhinopithecus_roxellana
ENSNBRG00000004463	smarca5	98	83.947	ENSSBOG00000020641	SMARCA1	99	83.947	Saimiri_boliviensis_boliviensis
ENSNBRG00000004463	smarca5	97	79.938	ENSSHAG00000013518	SMARCA1	99	79.938	Sarcophilus_harrisii
ENSNBRG00000004463	smarca5	99	84.125	ENSSFOG00015009043	smarca1	96	84.623	Scleropages_formosus
ENSNBRG00000004463	smarca5	98	93.163	ENSSFOG00015016794	smarca5	100	93.402	Scleropages_formosus
ENSNBRG00000004463	smarca5	99	96.881	ENSSMAG00000004801	smarca5	96	96.881	Scophthalmus_maximus
ENSNBRG00000004463	smarca5	99	98.087	ENSSDUG00000020690	smarca5	96	98.087	Seriola_dumerili
ENSNBRG00000004463	smarca5	99	98.087	ENSSLDG00000025190	smarca5	96	98.087	Seriola_lalandi_dorsalis
ENSNBRG00000004463	smarca5	82	84.698	ENSSARG00000000842	SMARCA1	81	84.698	Sorex_araneus
ENSNBRG00000004463	smarca5	97	85.093	ENSSPUG00000000590	SMARCA1	93	85.432	Sphenodon_punctatus
ENSNBRG00000004463	smarca5	99	98.290	ENSSPAG00000002894	smarca5	97	98.039	Stegastes_partitus
ENSNBRG00000004463	smarca5	97	84.161	ENSSSCG00000012649	SMARCA1	96	82.430	Sus_scrofa
ENSNBRG00000004463	smarca5	98	84.216	ENSTGUG00000003899	-	99	84.216	Taeniopygia_guttata
ENSNBRG00000004463	smarca5	99	97.082	ENSTRUG00000014094	smarca5	96	97.082	Takifugu_rubripes
ENSNBRG00000004463	smarca5	100	96.181	ENSTNIG00000017717	smarca5	95	96.181	Tetraodon_nigroviridis
ENSNBRG00000004463	smarca5	89	82.927	ENSTBEG00000014973	SMARCA1	89	82.976	Tupaia_belangeri
ENSNBRG00000004463	smarca5	97	79.980	ENSTTRG00000006168	SMARCA1	96	80.757	Tursiops_truncatus
ENSNBRG00000004463	smarca5	99	83.030	ENSUAMG00000020201	SMARCA1	93	83.605	Ursus_americanus
ENSNBRG00000004463	smarca5	99	79.234	ENSUMAG00000004073	SMARCA1	96	84.841	Ursus_maritimus
ENSNBRG00000004463	smarca5	76	87.171	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSNBRG00000004463	smarca5	99	83.333	ENSVVUG00000008878	SMARCA1	98	85.410	Vulpes_vulpes
ENSNBRG00000004463	smarca5	98	84.232	ENSXETG00000001526	smarca1	98	84.560	Xenopus_tropicalis
ENSNBRG00000004463	smarca5	100	97.789	ENSXCOG00000011170	smarca5	99	97.789	Xiphophorus_couchianus
ENSNBRG00000004463	smarca5	100	97.789	ENSXMAG00000009678	smarca5	98	97.707	Xiphophorus_maculatus