EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004631 (Gene tree)
Gene ID: 102793859
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: elongation factor G%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 19404 bases
Position: chrJH422310.1:1714844-1734247
Accession: 102793859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005921	GTP_EFTU	PF00009.27	1.1e-62	1	1
ENSNBRP00000005921	GTP_EFTU_D2	PF03144.25	8.5e-17	1	1
ENSNBRP00000005921	EFG_IV	PF03764.18	1.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000006103	-	2190	XM_006795374	ENSNBRP00000005921	729 (aa)	XP_006795437	-

Gene Model

Click here to download ENSNBRG00000004631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004631	gfm1	97	33.333	ENSNBRG00000009181	gfm2	95	33.466
ENSNBRG00000004631	gfm1	75	38.926	ENSNBRG00000011329	-	72	38.926
ENSNBRG00000004631	gfm1	76	39.597	ENSNBRG00000020205	eef2b	73	39.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004631	gfm1	99	81.379	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSNBRG00000004631	gfm1	92	89.072	ENSAPOG00000016489	gfm1	96	88.323	Acanthochromis_polyacanthus
ENSNBRG00000004631	gfm1	98	82.451	ENSAMEG00000013542	GFM1	95	82.451	Ailuropoda_melanoleuca
ENSNBRG00000004631	gfm1	99	90.672	ENSACIG00000014465	gfm1	95	90.672	Amphilophus_citrinellus
ENSNBRG00000004631	gfm1	99	90.110	ENSAOCG00000006023	gfm1	97	90.110	Amphiprion_ocellaris
ENSNBRG00000004631	gfm1	99	89.835	ENSAPEG00000024499	gfm1	99	89.612	Amphiprion_percula
ENSNBRG00000004631	gfm1	99	90.659	ENSATEG00000013789	gfm1	97	90.659	Anabas_testudineus
ENSNBRG00000004631	gfm1	99	81.517	ENSAPLG00000005022	GFM1	100	81.517	Anas_platyrhynchos
ENSNBRG00000004631	gfm1	99	80.663	ENSACAG00000006829	GFM1	98	80.663	Anolis_carolinensis
ENSNBRG00000004631	gfm1	99	81.379	ENSANAG00000035983	GFM1	97	81.379	Aotus_nancymaae
ENSNBRG00000004631	gfm1	99	98.489	ENSACLG00000016586	gfm1	100	96.854	Astatotilapia_calliptera
ENSNBRG00000004631	gfm1	99	86.584	ENSAMXG00000013435	gfm1	97	86.584	Astyanax_mexicanus
ENSNBRG00000004631	gfm1	98	82.033	ENSBTAG00000027795	GFM1	95	82.033	Bos_taurus
ENSNBRG00000004631	gfm1	96	58.631	WBGene00009246	gfm-1	95	58.287	Caenorhabditis_elegans
ENSNBRG00000004631	gfm1	99	81.931	ENSCJAG00000000363	GFM1	97	81.931	Callithrix_jacchus
ENSNBRG00000004631	gfm1	98	82.312	ENSCAFG00000009006	GFM1	100	81.953	Canis_familiaris
ENSNBRG00000004631	gfm1	98	82.312	ENSCAFG00020005878	GFM1	98	82.312	Canis_lupus_dingo
ENSNBRG00000004631	gfm1	98	82.173	ENSCHIG00000015220	GFM1	95	82.173	Capra_hircus
ENSNBRG00000004631	gfm1	99	81.379	ENSTSYG00000002013	GFM1	96	81.379	Carlito_syrichta
ENSNBRG00000004631	gfm1	99	70.492	ENSCAPG00000005699	GFM1	97	71.133	Cavia_aperea
ENSNBRG00000004631	gfm1	99	80.966	ENSCPOG00000001194	GFM1	96	80.966	Cavia_porcellus
ENSNBRG00000004631	gfm1	99	81.379	ENSCCAG00000025561	GFM1	97	81.379	Cebus_capucinus
ENSNBRG00000004631	gfm1	99	81.517	ENSCATG00000037622	GFM1	97	81.517	Cercocebus_atys
ENSNBRG00000004631	gfm1	99	80.138	ENSCLAG00000002503	GFM1	96	80.138	Chinchilla_lanigera
ENSNBRG00000004631	gfm1	99	81.517	ENSCSAG00000012162	GFM1	97	81.517	Chlorocebus_sabaeus
ENSNBRG00000004631	gfm1	99	72.414	ENSCHOG00000004867	GFM1	96	72.414	Choloepus_hoffmanni
ENSNBRG00000004631	gfm1	99	81.956	ENSCPBG00000018367	GFM1	97	81.956	Chrysemys_picta_bellii
ENSNBRG00000004631	gfm1	96	59.718	ENSCING00000011960	-	92	59.718	Ciona_intestinalis
ENSNBRG00000004631	gfm1	96	60.369	ENSCSAVG00000008514	-	99	59.544	Ciona_savignyi
ENSNBRG00000004631	gfm1	99	81.517	ENSCANG00000031714	GFM1	97	81.517	Colobus_angolensis_palliatus
ENSNBRG00000004631	gfm1	98	81.869	ENSCGRG00001022095	GFM1	95	81.869	Cricetulus_griseus_chok1gshd
ENSNBRG00000004631	gfm1	98	81.869	ENSCGRG00000012043	GFM1	95	81.869	Cricetulus_griseus_crigri
ENSNBRG00000004631	gfm1	99	83.817	ENSCSEG00000017088	gfm1	99	83.817	Cynoglossus_semilaevis
ENSNBRG00000004631	gfm1	99	93.544	ENSCVAG00000004126	gfm1	100	91.899	Cyprinodon_variegatus
ENSNBRG00000004631	gfm1	99	83.978	ENSDARG00000063624	gfm1	97	83.978	Danio_rerio
ENSNBRG00000004631	gfm1	56	79.462	ENSDNOG00000016385	-	100	79.462	Dasypus_novemcinctus
ENSNBRG00000004631	gfm1	99	80.552	ENSDORG00000014165	Gfm1	96	80.552	Dipodomys_ordii
ENSNBRG00000004631	gfm1	97	68.406	FBgn0263133	mEFG1	95	68.406	Drosophila_melanogaster
ENSNBRG00000004631	gfm1	98	74.202	ENSETEG00000019197	GFM1	95	74.202	Echinops_telfairi
ENSNBRG00000004631	gfm1	93	63.111	ENSEBUG00000012794	gfm1	100	63.111	Eptatretus_burgeri
ENSNBRG00000004631	gfm1	98	60.833	ENSEEUG00000000429	GFM1	99	60.833	Erinaceus_europaeus
ENSNBRG00000004631	gfm1	99	86.126	ENSELUG00000014728	gfm1	97	86.126	Esox_lucius
ENSNBRG00000004631	gfm1	99	81.793	ENSFCAG00000013291	GFM1	96	81.793	Felis_catus
ENSNBRG00000004631	gfm1	93	81.185	ENSFALG00000007619	GFM1	100	81.185	Ficedula_albicollis
ENSNBRG00000004631	gfm1	99	81.103	ENSFDAG00000016559	GFM1	96	81.103	Fukomys_damarensis
ENSNBRG00000004631	gfm1	99	92.170	ENSFHEG00000006091	gfm1	97	92.170	Fundulus_heteroclitus
ENSNBRG00000004631	gfm1	99	86.520	ENSGMOG00000010161	gfm1	100	86.520	Gadus_morhua
ENSNBRG00000004631	gfm1	99	81.354	ENSGALG00000009634	GFM1	98	81.354	Gallus_gallus
ENSNBRG00000004631	gfm1	99	91.209	ENSGAFG00000012527	gfm1	97	91.209	Gambusia_affinis
ENSNBRG00000004631	gfm1	99	89.986	ENSGACG00000009864	gfm1	97	89.986	Gasterosteus_aculeatus
ENSNBRG00000004631	gfm1	99	81.655	ENSGGOG00000003085	GFM1	97	81.655	Gorilla_gorilla
ENSNBRG00000004631	gfm1	99	98.626	ENSHBUG00000002120	gfm1	97	98.626	Haplochromis_burtoni
ENSNBRG00000004631	gfm1	99	80.828	ENSHGLG00000016855	GFM1	96	80.828	Heterocephalus_glaber_female
ENSNBRG00000004631	gfm1	99	80.828	ENSHGLG00100013049	GFM1	96	80.828	Heterocephalus_glaber_male
ENSNBRG00000004631	gfm1	99	90.659	ENSHCOG00000007638	gfm1	99	90.536	Hippocampus_comes
ENSNBRG00000004631	gfm1	99	86.126	ENSIPUG00000005873	gfm1	97	86.126	Ictalurus_punctatus
ENSNBRG00000004631	gfm1	99	80.138	ENSSTOG00000010150	GFM1	98	80.138	Ictidomys_tridecemlineatus
ENSNBRG00000004631	gfm1	99	80.663	ENSJJAG00000016447	Gfm1	96	80.663	Jaculus_jaculus
ENSNBRG00000004631	gfm1	99	88.382	ENSKMAG00000020768	gfm1	97	87.912	Kryptolebias_marmoratus
ENSNBRG00000004631	gfm1	96	91.155	ENSLBEG00000021315	gfm1	100	91.155	Labrus_bergylta
ENSNBRG00000004631	gfm1	99	82.573	ENSLACG00000012295	GFM1	98	82.573	Latimeria_chalumnae
ENSNBRG00000004631	gfm1	99	80.711	ENSLOCG00000003778	gfm1	100	80.711	Lepisosteus_oculatus
ENSNBRG00000004631	gfm1	99	79.586	ENSLAFG00000010945	GFM1	100	78.345	Loxodonta_africana
ENSNBRG00000004631	gfm1	99	81.517	ENSMFAG00000035731	GFM1	97	81.517	Macaca_fascicularis
ENSNBRG00000004631	gfm1	99	81.517	ENSMMUG00000004961	GFM1	97	81.517	Macaca_mulatta
ENSNBRG00000004631	gfm1	99	81.379	ENSMNEG00000033245	GFM1	97	81.379	Macaca_nemestrina
ENSNBRG00000004631	gfm1	99	79.642	ENSMLEG00000030908	GFM1	99	79.459	Mandrillus_leucophaeus
ENSNBRG00000004631	gfm1	99	91.346	ENSMAMG00000011760	gfm1	97	91.346	Mastacembelus_armatus
ENSNBRG00000004631	gfm1	99	98.626	ENSMZEG00005016639	gfm1	97	98.626	Maylandia_zebra
ENSNBRG00000004631	gfm1	99	81.215	ENSMGAG00000010641	GFM1	97	81.215	Meleagris_gallopavo
ENSNBRG00000004631	gfm1	99	81.768	ENSMAUG00000000611	Gfm1	96	81.768	Mesocricetus_auratus
ENSNBRG00000004631	gfm1	99	82.207	ENSMICG00000049086	GFM1	96	82.207	Microcebus_murinus
ENSNBRG00000004631	gfm1	99	82.197	ENSMOCG00000000465	Gfm1	96	82.197	Microtus_ochrogaster
ENSNBRG00000004631	gfm1	99	91.989	ENSMMOG00000012538	gfm1	98	91.989	Mola_mola
ENSNBRG00000004631	gfm1	99	81.630	ENSMODG00000015673	GFM1	97	81.630	Monodelphis_domestica
ENSNBRG00000004631	gfm1	99	88.996	ENSMALG00000012508	gfm1	97	88.996	Monopterus_albus
ENSNBRG00000004631	gfm1	98	82.008	MGP_CAROLIEiJ_G0025052	Gfm1	95	82.008	Mus_caroli
ENSNBRG00000004631	gfm1	98	82.008	ENSMUSG00000027774	Gfm1	95	82.008	Mus_musculus
ENSNBRG00000004631	gfm1	99	81.354	MGP_PahariEiJ_G0026495	Gfm1	96	81.354	Mus_pahari
ENSNBRG00000004631	gfm1	98	82.008	MGP_SPRETEiJ_G0025994	Gfm1	95	82.008	Mus_spretus
ENSNBRG00000004631	gfm1	99	81.655	ENSMPUG00000002859	GFM1	96	81.655	Mustela_putorius_furo
ENSNBRG00000004631	gfm1	99	82.345	ENSMLUG00000000452	GFM1	96	82.345	Myotis_lucifugus
ENSNBRG00000004631	gfm1	99	80.249	ENSNGAG00000012375	Gfm1	97	80.249	Nannospalax_galili
ENSNBRG00000004631	gfm1	99	81.655	ENSNLEG00000004176	GFM1	97	81.655	Nomascus_leucogenys
ENSNBRG00000004631	gfm1	93	72.941	ENSMEUG00000007784	GFM1	99	72.941	Notamacropus_eugenii
ENSNBRG00000004631	gfm1	99	80.966	ENSOPRG00000009860	GFM1	98	80.966	Ochotona_princeps
ENSNBRG00000004631	gfm1	99	81.241	ENSODEG00000004316	GFM1	96	81.241	Octodon_degus
ENSNBRG00000004631	gfm1	99	97.940	ENSONIG00000003772	gfm1	97	97.940	Oreochromis_niloticus
ENSNBRG00000004631	gfm1	99	81.793	ENSOCUG00000013561	GFM1	96	81.793	Oryctolagus_cuniculus
ENSNBRG00000004631	gfm1	97	91.384	ENSORLG00000006487	gfm1	100	91.384	Oryzias_latipes
ENSNBRG00000004631	gfm1	99	90.522	ENSORLG00020003362	gfm1	97	90.522	Oryzias_latipes_hni
ENSNBRG00000004631	gfm1	99	90.659	ENSORLG00015005829	gfm1	97	90.659	Oryzias_latipes_hsok
ENSNBRG00000004631	gfm1	99	92.720	ENSOMEG00000012894	gfm1	97	92.720	Oryzias_melastigma
ENSNBRG00000004631	gfm1	99	80.966	ENSOGAG00000008298	GFM1	96	80.966	Otolemur_garnettii
ENSNBRG00000004631	gfm1	98	81.276	ENSOARG00000002409	GFM1	99	81.276	Ovis_aries
ENSNBRG00000004631	gfm1	99	81.655	ENSPPAG00000033881	GFM1	97	81.655	Pan_paniscus
ENSNBRG00000004631	gfm1	99	81.793	ENSPPRG00000009281	GFM1	96	81.793	Panthera_pardus
ENSNBRG00000004631	gfm1	99	81.655	ENSPTIG00000012416	GFM1	96	81.655	Panthera_tigris_altaica
ENSNBRG00000004631	gfm1	99	81.655	ENSPTRG00000015570	GFM1	97	81.655	Pan_troglodytes
ENSNBRG00000004631	gfm1	99	81.379	ENSPANG00000016512	GFM1	97	81.379	Papio_anubis
ENSNBRG00000004631	gfm1	99	84.509	ENSPKIG00000004876	gfm1	97	84.509	Paramormyrops_kingsleyae
ENSNBRG00000004631	gfm1	99	82.920	ENSPSIG00000012567	GFM1	97	82.920	Pelodiscus_sinensis
ENSNBRG00000004631	gfm1	99	88.414	ENSPMGG00000014068	gfm1	100	88.414	Periophthalmus_magnuspinnatus
ENSNBRG00000004631	gfm1	98	82.008	ENSPEMG00000008942	Gfm1	95	82.008	Peromyscus_maniculatus_bairdii
ENSNBRG00000004631	gfm1	87	78.549	ENSPCIG00000020195	GFM1	95	80.984	Phascolarctos_cinereus
ENSNBRG00000004631	gfm1	99	91.896	ENSPFOG00000011022	gfm1	97	91.896	Poecilia_formosa
ENSNBRG00000004631	gfm1	99	92.403	ENSPLAG00000019585	gfm1	97	91.474	Poecilia_latipinna
ENSNBRG00000004631	gfm1	99	91.758	ENSPMEG00000012376	gfm1	97	91.758	Poecilia_mexicana
ENSNBRG00000004631	gfm1	99	91.621	ENSPREG00000001332	gfm1	92	91.621	Poecilia_reticulata
ENSNBRG00000004631	gfm1	99	81.379	ENSPPYG00000014244	GFM1	97	81.379	Pongo_abelii
ENSNBRG00000004631	gfm1	96	80.370	ENSPCAG00000008934	GFM1	100	80.370	Procavia_capensis
ENSNBRG00000004631	gfm1	99	81.517	ENSPCOG00000022259	GFM1	96	81.517	Propithecus_coquereli
ENSNBRG00000004631	gfm1	99	80.828	ENSPVAG00000013605	GFM1	96	80.828	Pteropus_vampyrus
ENSNBRG00000004631	gfm1	99	98.901	ENSPNYG00000006037	gfm1	99	98.901	Pundamilia_nyererei
ENSNBRG00000004631	gfm1	99	86.464	ENSPNAG00000001237	gfm1	97	86.464	Pygocentrus_nattereri
ENSNBRG00000004631	gfm1	98	82.148	ENSRNOG00000012873	Gfm1	95	82.148	Rattus_norvegicus
ENSNBRG00000004631	gfm1	99	81.379	ENSRBIG00000031363	GFM1	97	81.379	Rhinopithecus_bieti
ENSNBRG00000004631	gfm1	99	81.517	ENSRROG00000031081	GFM1	97	81.517	Rhinopithecus_roxellana
ENSNBRG00000004631	gfm1	95	57.410	YLR069C	-	90	57.410	Saccharomyces_cerevisiae
ENSNBRG00000004631	gfm1	99	81.655	ENSSBOG00000023252	GFM1	97	81.655	Saimiri_boliviensis_boliviensis
ENSNBRG00000004631	gfm1	99	82.735	ENSSHAG00000017772	GFM1	97	82.735	Sarcophilus_harrisii
ENSNBRG00000004631	gfm1	99	84.499	ENSSFOG00015003117	gfm1	99	84.371	Scleropages_formosus
ENSNBRG00000004631	gfm1	99	90.180	ENSSMAG00000013221	gfm1	97	90.180	Scophthalmus_maximus
ENSNBRG00000004631	gfm1	99	92.857	ENSSDUG00000018665	gfm1	97	92.857	Seriola_dumerili
ENSNBRG00000004631	gfm1	99	92.720	ENSSLDG00000020606	gfm1	97	92.720	Seriola_lalandi_dorsalis
ENSNBRG00000004631	gfm1	99	79.558	ENSSPUG00000018686	GFM1	98	79.558	Sphenodon_punctatus
ENSNBRG00000004631	gfm1	99	92.995	ENSSPAG00000008800	gfm1	97	92.995	Stegastes_partitus
ENSNBRG00000004631	gfm1	98	81.616	ENSSSCG00000025651	GFM1	95	81.616	Sus_scrofa
ENSNBRG00000004631	gfm1	99	88.599	ENSTRUG00000009244	gfm1	97	88.599	Takifugu_rubripes
ENSNBRG00000004631	gfm1	99	90.797	ENSTNIG00000007729	gfm1	97	90.797	Tetraodon_nigroviridis
ENSNBRG00000004631	gfm1	92	73.333	ENSTBEG00000017404	GFM1	89	73.333	Tupaia_belangeri
ENSNBRG00000004631	gfm1	99	81.129	ENSTTRG00000001735	GFM1	96	81.129	Tursiops_truncatus
ENSNBRG00000004631	gfm1	99	81.793	ENSUAMG00000026381	GFM1	96	81.793	Ursus_americanus
ENSNBRG00000004631	gfm1	99	81.793	ENSUMAG00000011268	GFM1	96	81.793	Ursus_maritimus
ENSNBRG00000004631	gfm1	99	78.177	ENSVPAG00000009444	GFM1	96	78.177	Vicugna_pacos
ENSNBRG00000004631	gfm1	98	82.123	ENSVVUG00000020091	GFM1	100	81.657	Vulpes_vulpes
ENSNBRG00000004631	gfm1	98	84.540	ENSXETG00000032551	GFM1	95	84.540	Xenopus_tropicalis
ENSNBRG00000004631	gfm1	53	91.237	ENSXCOG00000012590	gfm1	89	91.237	Xiphophorus_couchianus
ENSNBRG00000004631	gfm1	99	91.484	ENSXMAG00000000261	gfm1	97	91.484	Xiphophorus_maculatus