EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004699 (Gene tree)
Gene ID: 102776394
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: signal recognition particle receptor subunit beta-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4605 bases
Position: chrJH422310.1:1724546-1729150
Accession: 102776394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005978	MMR_HSR1	PF01926.23	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000006163	-	705	XM_006795492	ENSNBRP00000005978	234 (aa)	XP_006795555	-

Gene Model

Click here to download ENSNBRG00000004699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004699	srprb	65	30.921	ENSNBRG00000017218	arf3b	68	30.921
ENSNBRG00000004699	srprb	53	30.081	ENSNBRG00000019783	arl1	63	30.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004699	srprb	95	85.088	ENSAPOG00000021219	srprb	75	91.346	Acanthochromis_polyacanthus
ENSNBRG00000004699	srprb	84	95.431	ENSACIG00000014621	srprb	74	95.431	Amphilophus_citrinellus
ENSNBRG00000004699	srprb	95	85.965	ENSAOCG00000017265	srprb	75	91.827	Amphiprion_ocellaris
ENSNBRG00000004699	srprb	95	85.965	ENSAPEG00000024541	srprb	66	91.827	Amphiprion_percula
ENSNBRG00000004699	srprb	88	87.864	ENSATEG00000014016	srprb	75	87.864	Anabas_testudineus
ENSNBRG00000004699	srprb	88	99.515	ENSACLG00000016748	srprb	75	99.515	Astatotilapia_calliptera
ENSNBRG00000004699	srprb	92	63.927	ENSAMXG00000044118	srprb	73	69.744	Astyanax_mexicanus
ENSNBRG00000004699	srprb	95	79.646	ENSCSEG00000017194	srprb	75	85.437	Cynoglossus_semilaevis
ENSNBRG00000004699	srprb	91	80.930	ENSCVAG00000004221	srprb	73	87.179	Cyprinodon_variegatus
ENSNBRG00000004699	srprb	91	61.395	ENSDARG00000030949	srprb	73	65.641	Danio_rerio
ENSNBRG00000004699	srprb	91	73.733	ENSELUG00000009740	srprb	73	79.188	Esox_lucius
ENSNBRG00000004699	srprb	84	87.817	ENSFHEG00000006004	srprb	74	87.817	Fundulus_heteroclitus
ENSNBRG00000004699	srprb	86	79.703	ENSGMOG00000002081	srprb	74	79.703	Gadus_morhua
ENSNBRG00000004699	srprb	91	80.465	ENSGAFG00000012593	srprb	74	86.667	Gambusia_affinis
ENSNBRG00000004699	srprb	94	81.982	ENSGACG00000009891	srprb	75	88.119	Gasterosteus_aculeatus
ENSNBRG00000004699	srprb	88	99.515	ENSHBUG00000002145	srprb	75	99.515	Haplochromis_burtoni
ENSNBRG00000004699	srprb	85	82.000	ENSHCOG00000007732	srprb	74	82.000	Hippocampus_comes
ENSNBRG00000004699	srprb	78	68.306	ENSIPUG00000004177	srprb	69	68.306	Ictalurus_punctatus
ENSNBRG00000004699	srprb	84	84.772	ENSKMAG00000020736	srprb	74	84.772	Kryptolebias_marmoratus
ENSNBRG00000004699	srprb	95	81.416	ENSLBEG00000021483	srprb	75	87.379	Labrus_bergylta
ENSNBRG00000004699	srprb	99	60.593	ENSLOCG00000009740	srprb	68	67.317	Lepisosteus_oculatus
ENSNBRG00000004699	srprb	88	88.835	ENSMAMG00000011876	srprb	76	88.835	Mastacembelus_armatus
ENSNBRG00000004699	srprb	88	90.909	ENSMZEG00005016621	srprb	81	90.909	Maylandia_zebra
ENSNBRG00000004699	srprb	85	88.442	ENSMMOG00000012550	srprb	74	88.442	Mola_mola
ENSNBRG00000004699	srprb	88	86.408	ENSMALG00000012595	srprb	75	86.408	Monopterus_albus
ENSNBRG00000004699	srprb	88	99.029	ENSONIG00000003788	srprb	61	99.029	Oreochromis_niloticus
ENSNBRG00000004699	srprb	94	77.130	ENSORLG00000006430	srprb	74	82.266	Oryzias_latipes
ENSNBRG00000004699	srprb	95	76.549	ENSORLG00020003413	srprb	75	81.553	Oryzias_latipes_hni
ENSNBRG00000004699	srprb	95	76.549	ENSORLG00015000166	srprb	75	81.553	Oryzias_latipes_hsok
ENSNBRG00000004699	srprb	95	77.876	ENSOMEG00000012735	srprb	75	83.495	Oryzias_melastigma
ENSNBRG00000004699	srprb	89	64.151	ENSPKIG00000013147	srprb	69	71.823	Paramormyrops_kingsleyae
ENSNBRG00000004699	srprb	95	74.779	ENSPMGG00000014061	srprb	74	80.097	Periophthalmus_magnuspinnatus
ENSNBRG00000004699	srprb	91	80.930	ENSPFOG00000011347	srprb	71	87.179	Poecilia_formosa
ENSNBRG00000004699	srprb	88	81.340	ENSPLAG00000001156	srprb	73	87.831	Poecilia_latipinna
ENSNBRG00000004699	srprb	88	80.861	ENSPMEG00000012169	srprb	73	87.302	Poecilia_mexicana
ENSNBRG00000004699	srprb	88	79.904	ENSPREG00000001449	srprb	73	86.243	Poecilia_reticulata
ENSNBRG00000004699	srprb	88	99.515	ENSPNYG00000005911	srprb	75	99.515	Pundamilia_nyererei
ENSNBRG00000004699	srprb	83	69.231	ENSPNAG00000009983	srprb	73	69.231	Pygocentrus_nattereri
ENSNBRG00000004699	srprb	91	65.581	ENSSFOG00015019355	srprb	69	73.370	Scleropages_formosus
ENSNBRG00000004699	srprb	88	89.806	ENSSMAG00000013202	srprb	75	89.806	Scophthalmus_maximus
ENSNBRG00000004699	srprb	95	84.513	ENSSDUG00000018746	srprb	70	90.777	Seriola_dumerili
ENSNBRG00000004699	srprb	95	84.513	ENSSLDG00000020560	srprb	75	90.777	Seriola_lalandi_dorsalis
ENSNBRG00000004699	srprb	95	85.088	ENSSPAG00000008898	srprb	75	90.865	Stegastes_partitus
ENSNBRG00000004699	srprb	95	81.416	ENSTRUG00000022463	srprb	75	87.379	Takifugu_rubripes
ENSNBRG00000004699	srprb	91	81.221	ENSTNIG00000007725	srprb	75	87.179	Tetraodon_nigroviridis
ENSNBRG00000004699	srprb	88	80.861	ENSXCOG00000012585	srprb	73	87.302	Xiphophorus_couchianus
ENSNBRG00000004699	srprb	88	81.340	ENSXMAG00000028725	srprb	73	87.831	Xiphophorus_maculatus