EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004760 (Gene tree)
Gene ID: 102779013
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 18655 bases
Position: chrJH422370.1:1187192-1205846
Accession: 102779013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000006169	RRM_1	PF00076.22	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000006356	-	6294	XM_006803023	ENSNBRP00000006169	2097 (aa)	XP_006803086	-

Gene Model

Click here to download ENSNBRG00000004760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004760	setd1a	60	63.898	ENSNBRG00000002915	setd1ba	52	64.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004760	setd1a	83	98.010	ENSAPOG00000018002	setd1a	79	97.156	Acanthochromis_polyacanthus
ENSNBRG00000004760	setd1a	52	75.000	ENSAMEG00000007540	-	50	78.378	Ailuropoda_melanoleuca
ENSNBRG00000004760	setd1a	81	92.045	ENSACIG00000007144	setd1a	70	91.798	Amphilophus_citrinellus
ENSNBRG00000004760	setd1a	75	85.167	ENSAOCG00000003663	setd1a	74	85.366	Amphiprion_ocellaris
ENSNBRG00000004760	setd1a	100	82.067	ENSATEG00000022798	setd1a	74	80.961	Anabas_testudineus
ENSNBRG00000004760	setd1a	100	93.282	ENSACLG00000024747	setd1a	100	93.282	Astatotilapia_calliptera
ENSNBRG00000004760	setd1a	76	76.886	ENSCSEG00000021605	setd1a	74	76.100	Cynoglossus_semilaevis
ENSNBRG00000004760	setd1a	100	77.059	ENSCVAG00000011672	setd1a	74	76.301	Cyprinodon_variegatus
ENSNBRG00000004760	setd1a	100	60.690	ENSELUG00000020261	setd1a	72	73.864	Esox_lucius
ENSNBRG00000004760	setd1a	100	73.794	ENSFHEG00000023258	setd1a	85	80.426	Fundulus_heteroclitus
ENSNBRG00000004760	setd1a	71	90.705	ENSGAFG00000011698	setd1a	84	90.705	Gambusia_affinis
ENSNBRG00000004760	setd1a	68	86.379	ENSGACG00000013688	setd1a	82	86.379	Gasterosteus_aculeatus
ENSNBRG00000004760	setd1a	100	93.645	ENSHBUG00000008893	setd1a	100	93.645	Haplochromis_burtoni
ENSNBRG00000004760	setd1a	82	83.714	ENSHCOG00000003119	setd1a	100	83.714	Hippocampus_comes
ENSNBRG00000004760	setd1a	100	79.306	ENSKMAG00000009484	setd1a	74	79.426	Kryptolebias_marmoratus
ENSNBRG00000004760	setd1a	75	76.872	ENSLBEG00000004399	setd1a	74	78.537	Labrus_bergylta
ENSNBRG00000004760	setd1a	74	89.241	ENSMAMG00000021851	setd1a	98	88.764	Mastacembelus_armatus
ENSNBRG00000004760	setd1a	100	93.191	ENSMZEG00005023141	setd1a	100	93.191	Maylandia_zebra
ENSNBRG00000004760	setd1a	52	78.716	ENSMAUG00000008959	-	55	78.716	Mesocricetus_auratus
ENSNBRG00000004760	setd1a	74	91.954	ENSMMOG00000016992	setd1a	99	91.954	Mola_mola
ENSNBRG00000004760	setd1a	99	79.663	ENSMALG00000007401	setd1a	73	82.863	Monopterus_albus
ENSNBRG00000004760	setd1a	52	78.378	MGP_CAROLIEiJ_G0030519	-	100	73.096	Mus_caroli
ENSNBRG00000004760	setd1a	53	78.378	ENSMUSG00000042308	Setd1a	100	73.096	Mus_musculus
ENSNBRG00000004760	setd1a	52	78.378	MGP_PahariEiJ_G0013726	-	100	73.096	Mus_pahari
ENSNBRG00000004760	setd1a	52	78.378	MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	Mus_spretus
ENSNBRG00000004760	setd1a	52	76.974	ENSMLUG00000027303	-	51	76.974	Myotis_lucifugus
ENSNBRG00000004760	setd1a	87	89.899	ENSONIG00000009854	setd1a	91	89.899	Oreochromis_niloticus
ENSNBRG00000004760	setd1a	75	75.305	ENSORLG00000002213	setd1a	74	76.406	Oryzias_latipes
ENSNBRG00000004760	setd1a	75	75.900	ENSORLG00020011897	setd1a	74	76.636	Oryzias_latipes_hni
ENSNBRG00000004760	setd1a	75	75.595	ENSORLG00015004826	setd1a	74	76.575	Oryzias_latipes_hsok
ENSNBRG00000004760	setd1a	100	74.752	ENSOMEG00000019732	setd1a	73	76.990	Oryzias_melastigma
ENSNBRG00000004760	setd1a	100	73.970	ENSPFOG00000013669	setd1a	74	73.794	Poecilia_formosa
ENSNBRG00000004760	setd1a	100	76.947	ENSPLAG00000009294	setd1a	74	75.382	Poecilia_latipinna
ENSNBRG00000004760	setd1a	100	75.917	ENSPMEG00000005864	setd1a	74	75.580	Poecilia_mexicana
ENSNBRG00000004760	setd1a	100	75.486	ENSPREG00000010201	setd1a	74	74.253	Poecilia_reticulata
ENSNBRG00000004760	setd1a	100	93.146	ENSPNYG00000014139	setd1a	100	93.146	Pundamilia_nyererei
ENSNBRG00000004760	setd1a	75	78.784	ENSSMAG00000008846	setd1a	75	79.610	Scophthalmus_maximus
ENSNBRG00000004760	setd1a	75	83.849	ENSSDUG00000022142	setd1a	74	84.419	Seriola_dumerili
ENSNBRG00000004760	setd1a	75	83.728	ENSSLDG00000018250	setd1a	74	84.297	Seriola_lalandi_dorsalis
ENSNBRG00000004760	setd1a	75	85.488	ENSSPAG00000007822	setd1a	74	85.636	Stegastes_partitus
ENSNBRG00000004760	setd1a	79	87.500	ENSTNIG00000014930	setd1a	90	81.471	Tetraodon_nigroviridis
ENSNBRG00000004760	setd1a	100	76.132	ENSXMAG00000008021	setd1a	74	76.481	Xiphophorus_maculatus