EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000005143 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: si:ch211-256m1.8
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5124 bases
Position: chrJH422327.1:2092968-2098091
Accession: ZDB-GENE-131127-417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000006539	tRNA-synt_2	PF00152.20	1.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000006732	-	4746	-	ENSNBRP00000006539	1581 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000005143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005143	si:ch211-256m1.8	100	80.670	ENSAPOG00000007012	si:ch211-256m1.8	100	80.670	Acanthochromis_polyacanthus
ENSNBRG00000005143	si:ch211-256m1.8	100	80.985	ENSAOCG00000012258	si:ch211-256m1.8	100	80.985	Amphiprion_ocellaris
ENSNBRG00000005143	si:ch211-256m1.8	100	80.922	ENSAPEG00000002724	si:ch211-256m1.8	100	80.922	Amphiprion_percula
ENSNBRG00000005143	si:ch211-256m1.8	100	81.238	ENSATEG00000006278	si:ch211-256m1.8	100	81.238	Anabas_testudineus
ENSNBRG00000005143	si:ch211-256m1.8	100	98.798	ENSACLG00000011503	si:ch211-256m1.8	100	98.798	Astatotilapia_calliptera
ENSNBRG00000005143	si:ch211-256m1.8	100	67.293	ENSAMXG00000038245	si:ch211-256m1.8	100	67.293	Astyanax_mexicanus
ENSNBRG00000005143	si:ch211-256m1.8	100	76.184	ENSCSEG00000006255	si:ch211-256m1.8	100	76.184	Cynoglossus_semilaevis
ENSNBRG00000005143	si:ch211-256m1.8	100	76.311	ENSCVAG00000003376	si:ch211-256m1.8	100	76.311	Cyprinodon_variegatus
ENSNBRG00000005143	si:ch211-256m1.8	100	66.162	ENSDARG00000055172	si:ch211-256m1.8	100	66.288	Danio_rerio
ENSNBRG00000005143	si:ch211-256m1.8	100	71.384	ENSELUG00000010546	si:ch211-256m1.8	100	71.384	Esox_lucius
ENSNBRG00000005143	si:ch211-256m1.8	100	75.648	ENSFHEG00000005847	si:ch211-256m1.8	100	75.648	Fundulus_heteroclitus
ENSNBRG00000005143	si:ch211-256m1.8	100	77.701	ENSGAFG00000010269	si:ch211-256m1.8	100	77.701	Gambusia_affinis
ENSNBRG00000005143	si:ch211-256m1.8	100	98.861	ENSHBUG00000014407	si:ch211-256m1.8	100	98.861	Haplochromis_burtoni
ENSNBRG00000005143	si:ch211-256m1.8	100	72.992	ENSHCOG00000006884	si:ch211-256m1.8	100	74.520	Hippocampus_comes
ENSNBRG00000005143	si:ch211-256m1.8	100	65.851	ENSIPUG00000022659	si:ch211-256m1.8	100	65.851	Ictalurus_punctatus
ENSNBRG00000005143	si:ch211-256m1.8	100	78.648	ENSKMAG00000016377	si:ch211-256m1.8	100	78.648	Kryptolebias_marmoratus
ENSNBRG00000005143	si:ch211-256m1.8	100	81.112	ENSLBEG00000010639	si:ch211-256m1.8	100	81.112	Labrus_bergylta
ENSNBRG00000005143	si:ch211-256m1.8	100	59.663	ENSLOCG00000011127	si:ch211-256m1.8	100	59.663	Lepisosteus_oculatus
ENSNBRG00000005143	si:ch211-256m1.8	99	79.911	ENSMAMG00000005651	si:ch211-256m1.8	99	79.911	Mastacembelus_armatus
ENSNBRG00000005143	si:ch211-256m1.8	100	98.735	ENSMZEG00005006924	si:ch211-256m1.8	100	98.735	Maylandia_zebra
ENSNBRG00000005143	si:ch211-256m1.8	100	75.788	ENSMMOG00000001736	si:ch211-256m1.8	100	75.788	Mola_mola
ENSNBRG00000005143	si:ch211-256m1.8	100	76.641	ENSORLG00000022248	si:ch211-256m1.8	100	76.641	Oryzias_latipes
ENSNBRG00000005143	si:ch211-256m1.8	100	76.326	ENSORLG00020000214	si:ch211-256m1.8	100	76.326	Oryzias_latipes_hni
ENSNBRG00000005143	si:ch211-256m1.8	100	76.184	ENSORLG00015020297	si:ch211-256m1.8	100	76.184	Oryzias_latipes_hsok
ENSNBRG00000005143	si:ch211-256m1.8	100	76.534	ENSOMEG00000004519	si:ch211-256m1.8	100	76.640	Oryzias_melastigma
ENSNBRG00000005143	si:ch211-256m1.8	100	61.602	ENSPKIG00000007399	si:ch211-256m1.8	100	61.602	Paramormyrops_kingsleyae
ENSNBRG00000005143	si:ch211-256m1.8	100	67.718	ENSPMGG00000007698	si:ch211-256m1.8	100	67.718	Periophthalmus_magnuspinnatus
ENSNBRG00000005143	si:ch211-256m1.8	100	77.511	ENSPFOG00000005178	si:ch211-256m1.8	100	77.511	Poecilia_formosa
ENSNBRG00000005143	si:ch211-256m1.8	100	77.448	ENSPLAG00000006872	si:ch211-256m1.8	100	77.448	Poecilia_latipinna
ENSNBRG00000005143	si:ch211-256m1.8	100	77.322	ENSPMEG00000021815	si:ch211-256m1.8	100	77.322	Poecilia_mexicana
ENSNBRG00000005143	si:ch211-256m1.8	100	77.322	ENSPREG00000018669	si:ch211-256m1.8	100	77.322	Poecilia_reticulata
ENSNBRG00000005143	si:ch211-256m1.8	100	98.798	ENSPNYG00000018038	si:ch211-256m1.8	100	98.798	Pundamilia_nyererei
ENSNBRG00000005143	si:ch211-256m1.8	99	65.912	ENSPNAG00000018965	-	99	65.912	Pygocentrus_nattereri
ENSNBRG00000005143	si:ch211-256m1.8	99	67.085	ENSPNAG00000003552	si:ch211-256m1.8	99	66.875	Pygocentrus_nattereri
ENSNBRG00000005143	si:ch211-256m1.8	100	66.247	ENSSFOG00015008344	si:ch211-256m1.8	100	66.247	Scleropages_formosus
ENSNBRG00000005143	si:ch211-256m1.8	100	80.796	ENSSMAG00000007562	si:ch211-256m1.8	100	80.796	Scophthalmus_maximus
ENSNBRG00000005143	si:ch211-256m1.8	100	84.124	ENSSDUG00000018180	si:ch211-256m1.8	100	84.124	Seriola_dumerili
ENSNBRG00000005143	si:ch211-256m1.8	100	83.934	ENSSLDG00000020310	si:ch211-256m1.8	100	83.934	Seriola_lalandi_dorsalis
ENSNBRG00000005143	si:ch211-256m1.8	100	81.680	ENSSPAG00000013419	si:ch211-256m1.8	100	81.680	Stegastes_partitus
ENSNBRG00000005143	si:ch211-256m1.8	100	70.120	ENSTRUG00000023803	si:ch211-256m1.8	100	70.120	Takifugu_rubripes
ENSNBRG00000005143	si:ch211-256m1.8	100	77.890	ENSXCOG00000017726	si:ch211-256m1.8	100	77.890	Xiphophorus_couchianus
ENSNBRG00000005143	si:ch211-256m1.8	100	78.016	ENSXMAG00000026576	si:ch211-256m1.8	100	78.016	Xiphophorus_maculatus