EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000005334 (Gene tree)
Gene ID: 102796120
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: DNA-(apurinic or apyrimidinic site) lyase-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3549 bases
Position: chrJH422415.1:70210-73758
Accession: 102796120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000006781	Exo_endo_phos	PF03372.23	3.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000006977	-	2984	XM_006805542	ENSNBRP00000006781	339 (aa)	XP_006805605	-

Gene Model

Click here to download ENSNBRG00000005334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005334	apex1	91	65.723	ENSG00000100823	APEX1	86	71.636	Homo_sapiens
ENSNBRG00000005334	apex1	91	88.387	ENSAPOG00000017002	apex1	97	90.169	Acanthochromis_polyacanthus
ENSNBRG00000005334	apex1	91	65.823	ENSAMEG00000005418	APEX1	87	70.652	Ailuropoda_melanoleuca
ENSNBRG00000005334	apex1	82	94.224	ENSACIG00000010653	apex1	93	94.182	Amphilophus_citrinellus
ENSNBRG00000005334	apex1	91	89.355	ENSAOCG00000009649	apex1	89	92.000	Amphiprion_ocellaris
ENSNBRG00000005334	apex1	91	89.677	ENSAPEG00000021453	apex1	89	92.364	Amphiprion_percula
ENSNBRG00000005334	apex1	91	91.909	ENSATEG00000002883	apex1	97	91.909	Anabas_testudineus
ENSNBRG00000005334	apex1	91	70.159	ENSACAG00000008099	APEX1	87	74.909	Anolis_carolinensis
ENSNBRG00000005334	apex1	91	66.772	ENSANAG00000030117	APEX1	86	72.000	Aotus_nancymaae
ENSNBRG00000005334	apex1	91	99.355	ENSACLG00000018441	apex1	100	99.355	Astatotilapia_calliptera
ENSNBRG00000005334	apex1	91	87.419	ENSAMXG00000034699	apex1	88	90.909	Astyanax_mexicanus
ENSNBRG00000005334	apex1	91	65.506	ENSBTAG00000002745	APEX1	87	69.928	Bos_taurus
ENSNBRG00000005334	apex1	90	42.810	WBGene00001372	exo-3	92	44.569	Caenorhabditis_elegans
ENSNBRG00000005334	apex1	91	66.772	ENSCJAG00000009726	APEX1	86	72.000	Callithrix_jacchus
ENSNBRG00000005334	apex1	91	66.139	ENSCAFG00000032033	APEX1	86	71.273	Canis_familiaris
ENSNBRG00000005334	apex1	91	66.139	ENSCAFG00020014377	-	86	71.273	Canis_lupus_dingo
ENSNBRG00000005334	apex1	80	56.827	ENSCHIG00000014537	-	86	56.827	Capra_hircus
ENSNBRG00000005334	apex1	91	65.506	ENSCHIG00000007298	-	87	69.928	Capra_hircus
ENSNBRG00000005334	apex1	91	64.873	ENSTSYG00000034813	APEX1	87	69.565	Carlito_syrichta
ENSNBRG00000005334	apex1	80	65.693	ENSCAPG00000016235	APEX1	91	72.034	Cavia_aperea
ENSNBRG00000005334	apex1	91	67.405	ENSCPOG00000030909	APEX1	86	72.364	Cavia_porcellus
ENSNBRG00000005334	apex1	91	57.911	ENSCCAG00000031931	-	86	62.182	Cebus_capucinus
ENSNBRG00000005334	apex1	91	66.772	ENSCCAG00000033056	-	86	72.000	Cebus_capucinus
ENSNBRG00000005334	apex1	91	67.089	ENSCATG00000015580	APEX1	86	71.636	Cercocebus_atys
ENSNBRG00000005334	apex1	91	66.456	ENSCLAG00000001002	APEX1	87	71.377	Chinchilla_lanigera
ENSNBRG00000005334	apex1	91	67.405	ENSCSAG00000016670	-	86	72.000	Chlorocebus_sabaeus
ENSNBRG00000005334	apex1	91	67.405	ENSCSAG00000016685	-	86	72.000	Chlorocebus_sabaeus
ENSNBRG00000005334	apex1	91	70.886	ENSCPBG00000009567	APEX1	86	76.364	Chrysemys_picta_bellii
ENSNBRG00000005334	apex1	90	55.556	ENSCING00000008137	-	85	59.925	Ciona_intestinalis
ENSNBRG00000005334	apex1	88	49.671	ENSCSAVG00000007144	-	100	55.039	Ciona_savignyi
ENSNBRG00000005334	apex1	91	66.456	ENSCANG00000030726	APEX1	86	71.636	Colobus_angolensis_palliatus
ENSNBRG00000005334	apex1	91	65.300	ENSCGRG00001017046	Apex1	87	69.928	Cricetulus_griseus_chok1gshd
ENSNBRG00000005334	apex1	91	65.300	ENSCGRG00000008984	Apex1	87	69.928	Cricetulus_griseus_crigri
ENSNBRG00000005334	apex1	91	88.710	ENSCSEG00000017499	apex1	99	88.710	Cynoglossus_semilaevis
ENSNBRG00000005334	apex1	91	91.935	ENSCVAG00000022075	apex1	100	91.935	Cyprinodon_variegatus
ENSNBRG00000005334	apex1	97	80.909	ENSDARG00000045843	apex1	100	78.886	Danio_rerio
ENSNBRG00000005334	apex1	91	62.658	ENSDNOG00000042234	APEX1	82	67.391	Dasypus_novemcinctus
ENSNBRG00000005334	apex1	91	65.506	ENSDORG00000001616	Apex1	87	70.290	Dipodomys_ordii
ENSNBRG00000005334	apex1	91	66.456	ENSETEG00000004855	-	86	71.273	Echinops_telfairi
ENSNBRG00000005334	apex1	70	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSNBRG00000005334	apex1	96	63.284	ENSEASG00005017489	APEX1	64	71.014	Equus_asinus_asinus
ENSNBRG00000005334	apex1	96	63.284	ENSECAG00000022325	APEX1	71	71.014	Equus_caballus
ENSNBRG00000005334	apex1	79	70.260	ENSEEUG00000012569	APEX1	92	70.301	Erinaceus_europaeus
ENSNBRG00000005334	apex1	91	82.258	ENSELUG00000021706	apex1	88	87.636	Esox_lucius
ENSNBRG00000005334	apex1	91	66.456	ENSFCAG00000030869	APEX1	87	71.377	Felis_catus
ENSNBRG00000005334	apex1	91	66.772	ENSFDAG00000006120	APEX1	87	71.739	Fukomys_damarensis
ENSNBRG00000005334	apex1	97	90.549	ENSFHEG00000009031	apex1	88	90.549	Fundulus_heteroclitus
ENSNBRG00000005334	apex1	91	77.814	ENSGMOG00000007943	apex1	88	80.000	Gadus_morhua
ENSNBRG00000005334	apex1	91	91.613	ENSGAFG00000005311	apex1	100	91.613	Gambusia_affinis
ENSNBRG00000005334	apex1	92	89.389	ENSGACG00000019497	apex1	99	90.977	Gasterosteus_aculeatus
ENSNBRG00000005334	apex1	91	70.886	ENSGAGG00000014999	APEX1	86	76.364	Gopherus_agassizii
ENSNBRG00000005334	apex1	91	65.409	ENSGGOG00000002128	APEX1	86	71.273	Gorilla_gorilla
ENSNBRG00000005334	apex1	91	99.032	ENSHBUG00000005894	apex1	100	99.032	Haplochromis_burtoni
ENSNBRG00000005334	apex1	91	66.456	ENSHGLG00000002848	APEX1	87	71.739	Heterocephalus_glaber_female
ENSNBRG00000005334	apex1	91	66.456	ENSHGLG00100017878	APEX1	87	71.739	Heterocephalus_glaber_male
ENSNBRG00000005334	apex1	91	87.460	ENSHCOG00000009961	apex1	88	89.818	Hippocampus_comes
ENSNBRG00000005334	apex1	91	84.839	ENSIPUG00000005799	apex1	88	88.000	Ictalurus_punctatus
ENSNBRG00000005334	apex1	91	66.772	ENSSTOG00000010096	APEX1	87	71.739	Ictidomys_tridecemlineatus
ENSNBRG00000005334	apex1	82	61.649	ENSJJAG00000020465	-	89	61.594	Jaculus_jaculus
ENSNBRG00000005334	apex1	91	65.190	ENSJJAG00000012067	-	87	69.928	Jaculus_jaculus
ENSNBRG00000005334	apex1	91	57.680	ENSJJAG00000003660	-	87	61.957	Jaculus_jaculus
ENSNBRG00000005334	apex1	91	91.290	ENSKMAG00000021171	apex1	100	91.290	Kryptolebias_marmoratus
ENSNBRG00000005334	apex1	91	89.032	ENSLBEG00000010248	apex1	100	89.032	Labrus_bergylta
ENSNBRG00000005334	apex1	91	72.756	ENSLACG00000008617	APEX1	87	78.467	Latimeria_chalumnae
ENSNBRG00000005334	apex1	91	78.594	ENSLOCG00000015516	apex1	87	82.545	Lepisosteus_oculatus
ENSNBRG00000005334	apex1	91	67.089	ENSLAFG00000021872	APEX1	86	72.364	Loxodonta_africana
ENSNBRG00000005334	apex1	91	66.456	ENSMFAG00000002565	APEX1	86	71.636	Macaca_fascicularis
ENSNBRG00000005334	apex1	91	66.456	ENSMMUG00000048039	APEX1	86	71.636	Macaca_mulatta
ENSNBRG00000005334	apex1	91	66.456	ENSMNEG00000036944	APEX1	86	71.636	Macaca_nemestrina
ENSNBRG00000005334	apex1	91	67.089	ENSMLEG00000042125	APEX1	86	71.636	Mandrillus_leucophaeus
ENSNBRG00000005334	apex1	100	88.201	ENSMAMG00000023526	apex1	100	91.290	Mastacembelus_armatus
ENSNBRG00000005334	apex1	91	99.355	ENSMZEG00005014187	apex1	100	99.355	Maylandia_zebra
ENSNBRG00000005334	apex1	91	65.506	ENSMAUG00000013994	Apex1	87	69.565	Mesocricetus_auratus
ENSNBRG00000005334	apex1	91	64.984	ENSMICG00000043554	APEX1	87	69.928	Microcebus_murinus
ENSNBRG00000005334	apex1	91	66.349	ENSMOCG00000013721	Apex1	87	71.014	Microtus_ochrogaster
ENSNBRG00000005334	apex1	94	86.875	ENSMMOG00000010031	apex1	100	84.688	Mola_mola
ENSNBRG00000005334	apex1	83	68.198	ENSMODG00000007125	APEX1	86	69.455	Monodelphis_domestica
ENSNBRG00000005334	apex1	83	84.286	ENSMALG00000011699	apex1	74	84.000	Monopterus_albus
ENSNBRG00000005334	apex1	91	67.197	MGP_CAROLIEiJ_G0019209	Apex1	87	71.636	Mus_caroli
ENSNBRG00000005334	apex1	91	66.984	ENSMUSG00000035960	Apex1	87	71.377	Mus_musculus
ENSNBRG00000005334	apex1	91	67.302	MGP_PahariEiJ_G0030232	Apex1	87	71.636	Mus_pahari
ENSNBRG00000005334	apex1	91	66.984	MGP_SPRETEiJ_G0020101	Apex1	87	71.377	Mus_spretus
ENSNBRG00000005334	apex1	91	64.465	ENSMLUG00000028957	APEX1	86	70.290	Myotis_lucifugus
ENSNBRG00000005334	apex1	91	65.506	ENSNGAG00000002725	-	87	71.014	Nannospalax_galili
ENSNBRG00000005334	apex1	80	53.430	ENSNGAG00000021748	-	71	57.384	Nannospalax_galili
ENSNBRG00000005334	apex1	91	65.409	ENSNLEG00000010839	APEX1	88	71.273	Nomascus_leucogenys
ENSNBRG00000005334	apex1	91	65.495	ENSMEUG00000014519	APEX1	87	69.343	Notamacropus_eugenii
ENSNBRG00000005334	apex1	91	65.823	ENSOPRG00000014029	APEX1	87	69.565	Ochotona_princeps
ENSNBRG00000005334	apex1	91	66.456	ENSODEG00000001703	-	87	71.377	Octodon_degus
ENSNBRG00000005334	apex1	91	51.863	ENSODEG00000006583	-	86	54.965	Octodon_degus
ENSNBRG00000005334	apex1	87	52.542	ENSODEG00000004777	-	83	58.333	Octodon_degus
ENSNBRG00000005334	apex1	91	99.355	ENSONIG00000012089	apex1	100	99.355	Oreochromis_niloticus
ENSNBRG00000005334	apex1	81	70.545	ENSOANG00000008836	APEX1	68	70.545	Ornithorhynchus_anatinus
ENSNBRG00000005334	apex1	91	66.456	ENSOCUG00000005022	APEX1	87	71.014	Oryctolagus_cuniculus
ENSNBRG00000005334	apex1	91	89.711	ENSORLG00000012378	apex1	88	92.000	Oryzias_latipes
ENSNBRG00000005334	apex1	91	89.711	ENSORLG00020021371	apex1	88	92.000	Oryzias_latipes_hni
ENSNBRG00000005334	apex1	91	89.711	ENSORLG00015020089	apex1	88	92.000	Oryzias_latipes_hsok
ENSNBRG00000005334	apex1	91	90.675	ENSOMEG00000018876	apex1	95	90.847	Oryzias_melastigma
ENSNBRG00000005334	apex1	82	62.724	ENSOGAG00000029355	-	87	62.681	Otolemur_garnettii
ENSNBRG00000005334	apex1	91	66.139	ENSOGAG00000013335	-	87	71.014	Otolemur_garnettii
ENSNBRG00000005334	apex1	88	55.629	ENSOARG00000014424	-	88	58.333	Ovis_aries
ENSNBRG00000005334	apex1	88	62.745	ENSOARG00000001876	-	86	66.917	Ovis_aries
ENSNBRG00000005334	apex1	91	65.823	ENSOARG00000019740	-	87	70.290	Ovis_aries
ENSNBRG00000005334	apex1	91	65.723	ENSPPAG00000038760	APEX1	88	71.636	Pan_paniscus
ENSNBRG00000005334	apex1	91	66.456	ENSPPRG00000011794	APEX1	87	71.377	Panthera_pardus
ENSNBRG00000005334	apex1	91	66.456	ENSPTIG00000014829	APEX1	87	71.377	Panthera_tigris_altaica
ENSNBRG00000005334	apex1	91	65.723	ENSPTRG00000006093	APEX1	88	71.636	Pan_troglodytes
ENSNBRG00000005334	apex1	91	67.089	ENSPANG00000022757	APEX1	86	71.636	Papio_anubis
ENSNBRG00000005334	apex1	81	87.319	ENSPKIG00000003504	apex1	88	87.273	Paramormyrops_kingsleyae
ENSNBRG00000005334	apex1	80	77.656	ENSPMGG00000016596	apex1	80	77.656	Periophthalmus_magnuspinnatus
ENSNBRG00000005334	apex1	91	65.931	ENSPEMG00000019097	Apex1	87	70.290	Peromyscus_maniculatus_bairdii
ENSNBRG00000005334	apex1	84	72.474	ENSPMAG00000007275	-	93	73.818	Petromyzon_marinus
ENSNBRG00000005334	apex1	82	68.459	ENSPCIG00000023274	APEX1	86	69.343	Phascolarctos_cinereus
ENSNBRG00000005334	apex1	91	90.968	ENSPFOG00000004178	apex1	100	90.968	Poecilia_formosa
ENSNBRG00000005334	apex1	91	91.290	ENSPLAG00000012779	apex1	100	91.290	Poecilia_latipinna
ENSNBRG00000005334	apex1	91	90.968	ENSPMEG00000019623	apex1	100	90.968	Poecilia_mexicana
ENSNBRG00000005334	apex1	92	89.389	ENSPREG00000014298	apex1	100	89.389	Poecilia_reticulata
ENSNBRG00000005334	apex1	91	65.409	ENSPPYG00000005565	APEX1	86	71.273	Pongo_abelii
ENSNBRG00000005334	apex1	91	65.615	ENSPCAG00000010376	APEX1	86	70.545	Procavia_capensis
ENSNBRG00000005334	apex1	91	65.300	ENSPCOG00000021564	APEX1	87	70.290	Propithecus_coquereli
ENSNBRG00000005334	apex1	91	65.409	ENSPVAG00000010736	APEX1	86	70.909	Pteropus_vampyrus
ENSNBRG00000005334	apex1	91	99.677	ENSPNYG00000023940	apex1	100	99.677	Pundamilia_nyererei
ENSNBRG00000005334	apex1	84	86.364	ENSPNAG00000020897	apex1	84	91.235	Pygocentrus_nattereri
ENSNBRG00000005334	apex1	91	66.349	ENSRNOG00000009663	Apex1	87	71.014	Rattus_norvegicus
ENSNBRG00000005334	apex1	91	67.089	ENSRBIG00000038325	APEX1	85	71.636	Rhinopithecus_bieti
ENSNBRG00000005334	apex1	91	59.677	ENSSBOG00000031372	-	89	62.909	Saimiri_boliviensis_boliviensis
ENSNBRG00000005334	apex1	91	66.772	ENSSBOG00000018921	-	86	72.000	Saimiri_boliviensis_boliviensis
ENSNBRG00000005334	apex1	92	62.857	ENSSHAG00000013524	APEX1	85	68.592	Sarcophilus_harrisii
ENSNBRG00000005334	apex1	91	82.848	ENSSFOG00015001948	apex1	89	86.545	Scleropages_formosus
ENSNBRG00000005334	apex1	91	87.302	ENSSMAG00000013348	apex1	87	90.545	Scophthalmus_maximus
ENSNBRG00000005334	apex1	92	90.354	ENSSDUG00000016377	apex1	100	90.354	Seriola_dumerili
ENSNBRG00000005334	apex1	91	90.323	ENSSLDG00000023005	apex1	100	90.323	Seriola_lalandi_dorsalis
ENSNBRG00000005334	apex1	83	72.340	ENSSPUG00000000531	APEX1	93	73.358	Sphenodon_punctatus
ENSNBRG00000005334	apex1	91	89.677	ENSSPAG00000000458	apex1	100	89.677	Stegastes_partitus
ENSNBRG00000005334	apex1	91	66.667	ENSSSCG00000040060	-	87	71.014	Sus_scrofa
ENSNBRG00000005334	apex1	87	39.934	ENSSSCG00000039705	-	89	41.877	Sus_scrofa
ENSNBRG00000005334	apex1	69	58.723	ENSTGUG00000014378	APEX1	100	58.723	Taeniopygia_guttata
ENSNBRG00000005334	apex1	96	85.152	ENSTRUG00000004268	apex1	100	84.848	Takifugu_rubripes
ENSNBRG00000005334	apex1	91	85.161	ENSTNIG00000005778	apex1	89	88.364	Tetraodon_nigroviridis
ENSNBRG00000005334	apex1	91	63.291	ENSTBEG00000006405	APEX1	86	68.000	Tupaia_belangeri
ENSNBRG00000005334	apex1	69	69.787	ENSTTRG00000007860	APEX1	100	69.787	Tursiops_truncatus
ENSNBRG00000005334	apex1	91	65.823	ENSUAMG00000010457	APEX1	87	70.290	Ursus_americanus
ENSNBRG00000005334	apex1	91	65.823	ENSUMAG00000009178	APEX1	87	70.290	Ursus_maritimus
ENSNBRG00000005334	apex1	69	67.234	ENSVPAG00000005083	APEX1	100	67.234	Vicugna_pacos
ENSNBRG00000005334	apex1	91	65.823	ENSVVUG00000009010	APEX1	86	70.909	Vulpes_vulpes
ENSNBRG00000005334	apex1	91	70.382	ENSXETG00000024773	apex1	87	74.545	Xenopus_tropicalis
ENSNBRG00000005334	apex1	92	90.675	ENSXCOG00000015233	apex1	100	90.675	Xiphophorus_couchianus
ENSNBRG00000005334	apex1	91	90.968	ENSXMAG00000006195	apex1	100	90.968	Xiphophorus_maculatus