EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000005588 (Gene tree)
Gene ID: -
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 52613 bases
Position: chrJH422287.1:5929156-5981768
Accession: ZDB-GENE-021220-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007230	DBP10CT	PF08147.12	2.1e-12	1	1
ENSNBRP00000007230	DEAD	PF00270.29	2e-51	1	1
ENSNBRP00000007260	DEAD	PF00270.29	4.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007434	-	2334	-	ENSNBRP00000007230	777 (aa)	-	-
ENSNBRT00000007465	-	1062	-	ENSNBRP00000007260	353 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000005588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000005588	ddx54	75	30.000	ENSNBRG00000006198	ddx21	50	31.771
ENSNBRG00000005588	ddx54	75	31.757	ENSNBRG00000001394	ddx47	70	35.191
ENSNBRG00000005588	ddx54	75	30.556	ENSNBRG00000006206	ddx27	76	34.848
ENSNBRG00000005588	ddx54	75	30.795	ENSNBRG00000015087	DDX41	55	33.724
ENSNBRG00000005588	ddx54	75	30.094	ENSNBRG00000020448	-	50	31.714
ENSNBRG00000005588	ddx54	75	31.481	ENSNBRG00000018748	ddx55	55	35.952
ENSNBRG00000005588	ddx54	75	31.661	ENSNBRG00000022025	ddx49	70	36.012
ENSNBRG00000005588	ddx54	75	30.068	ENSNBRG00000002029	ddx59	55	34.568
ENSNBRG00000005588	ddx54	75	30.000	ENSNBRG00000007750	ddx52	53	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005588	ddx54	72	79.070	ENSG00000123064	DDX54	100	88.942	Homo_sapiens
ENSNBRG00000005588	ddx54	73	96.305	ENSAPOG00000008602	ddx54	69	96.305	Acanthochromis_polyacanthus
ENSNBRG00000005588	ddx54	74	77.387	ENSAMEG00000008775	DDX54	65	77.387	Ailuropoda_melanoleuca
ENSNBRG00000005588	ddx54	75	97.800	ENSACIG00000019104	ddx54	68	97.800	Amphilophus_citrinellus
ENSNBRG00000005588	ddx54	73	95.567	ENSAOCG00000008449	ddx54	69	95.567	Amphiprion_ocellaris
ENSNBRG00000005588	ddx54	73	95.567	ENSAPEG00000014287	ddx54	69	95.567	Amphiprion_percula
ENSNBRG00000005588	ddx54	75	94.815	ENSATEG00000018529	ddx54	69	94.815	Anabas_testudineus
ENSNBRG00000005588	ddx54	70	79.781	ENSAPLG00000013191	DDX54	76	68.421	Anas_platyrhynchos
ENSNBRG00000005588	ddx54	72	79.947	ENSACAG00000004703	DDX54	65	79.947	Anolis_carolinensis
ENSNBRG00000005588	ddx54	75	58.654	ENSANAG00000032761	-	65	58.867	Aotus_nancymaae
ENSNBRG00000005588	ddx54	65	76.235	ENSANAG00000032241	-	59	75.399	Aotus_nancymaae
ENSNBRG00000005588	ddx54	75	99.753	ENSACLG00000013176	ddx54	69	99.753	Astatotilapia_calliptera
ENSNBRG00000005588	ddx54	95	76.162	ENSAMXG00000009189	ddx54	84	75.855	Astyanax_mexicanus
ENSNBRG00000005588	ddx54	73	78.894	ENSBTAG00000011930	DDX54	62	78.750	Bos_taurus
ENSNBRG00000005588	ddx54	60	79.587	ENSCJAG00000010039	DDX54	53	77.482	Callithrix_jacchus
ENSNBRG00000005588	ddx54	75	76.998	ENSCAFG00020017643	DDX54	67	76.341	Canis_lupus_dingo
ENSNBRG00000005588	ddx54	73	75.879	ENSCHIG00000026798	DDX54	65	75.750	Capra_hircus
ENSNBRG00000005588	ddx54	70	74.317	ENSTSYG00000007898	DDX54	62	74.317	Carlito_syrichta
ENSNBRG00000005588	ddx54	70	81.967	ENSCAPG00000001482	DDX54	65	81.967	Cavia_aperea
ENSNBRG00000005588	ddx54	73	78.827	ENSCPOG00000020649	DDX54	65	78.827	Cavia_porcellus
ENSNBRG00000005588	ddx54	74	78.141	ENSCCAG00000022625	DDX54	67	77.482	Cebus_capucinus
ENSNBRG00000005588	ddx54	73	78.392	ENSCATG00000041943	DDX54	67	77.724	Cercocebus_atys
ENSNBRG00000005588	ddx54	75	75.912	ENSCLAG00000010748	DDX54	68	75.912	Chinchilla_lanigera
ENSNBRG00000005588	ddx54	70	81.492	ENSCSAG00000002432	DDX54	59	81.492	Chlorocebus_sabaeus
ENSNBRG00000005588	ddx54	50	82.039	ENSCPBG00000017982	DDX54	51	82.039	Chrysemys_picta_bellii
ENSNBRG00000005588	ddx54	67	65.316	ENSCING00000004789	-	64	65.051	Ciona_intestinalis
ENSNBRG00000005588	ddx54	64	71.510	ENSCSAVG00000008916	-	97	70.821	Ciona_savignyi
ENSNBRG00000005588	ddx54	64	88.085	ENSCANG00000020637	DDX54	63	88.085	Colobus_angolensis_palliatus
ENSNBRG00000005588	ddx54	75	77.670	ENSCGRG00001014803	Ddx54	65	79.442	Cricetulus_griseus_chok1gshd
ENSNBRG00000005588	ddx54	75	77.670	ENSCGRG00000002827	Ddx54	65	79.442	Cricetulus_griseus_crigri
ENSNBRG00000005588	ddx54	73	91.626	ENSCSEG00000016462	ddx54	69	91.626	Cynoglossus_semilaevis
ENSNBRG00000005588	ddx54	75	93.842	ENSCVAG00000022404	ddx54	68	93.842	Cyprinodon_variegatus
ENSNBRG00000005588	ddx54	79	85.749	ENSDARG00000105286	ddx54	80	85.749	Danio_rerio
ENSNBRG00000005588	ddx54	72	77.778	ENSDNOG00000032913	DDX54	68	75.545	Dasypus_novemcinctus
ENSNBRG00000005588	ddx54	55	71.774	ENSDORG00000003399	Ddx54	59	71.774	Dipodomys_ordii
ENSNBRG00000005588	ddx54	75	56.566	ENSEBUG00000008886	ddx54	55	72.821	Eptatretus_burgeri
ENSNBRG00000005588	ddx54	60	79.443	ENSEASG00005009501	DDX54	58	79.443	Equus_asinus_asinus
ENSNBRG00000005588	ddx54	72	79.328	ENSECAG00000012890	DDX54	73	76.341	Equus_caballus
ENSNBRG00000005588	ddx54	75	91.379	ENSELUG00000013533	ddx54	69	91.379	Esox_lucius
ENSNBRG00000005588	ddx54	74	76.884	ENSFCAG00000027806	DDX54	67	76.271	Felis_catus
ENSNBRG00000005588	ddx54	67	82.749	ENSFALG00000007737	DDX54	66	82.749	Ficedula_albicollis
ENSNBRG00000005588	ddx54	73	77.551	ENSFDAG00000019953	DDX54	73	76.250	Fukomys_damarensis
ENSNBRG00000005588	ddx54	83	94.335	ENSFHEG00000018425	ddx54	77	94.335	Fundulus_heteroclitus
ENSNBRG00000005588	ddx54	71	86.275	ENSGMOG00000011746	ddx54	68	86.275	Gadus_morhua
ENSNBRG00000005588	ddx54	70	80.328	ENSGALG00000007490	DDX54	65	80.939	Gallus_gallus
ENSNBRG00000005588	ddx54	79	93.333	ENSGAFG00000010336	ddx54	75	93.333	Gambusia_affinis
ENSNBRG00000005588	ddx54	75	88.537	ENSGACG00000016793	ddx54	68	88.537	Gasterosteus_aculeatus
ENSNBRG00000005588	ddx54	70	83.288	ENSGAGG00000022803	DDX54	67	85.100	Gopherus_agassizii
ENSNBRG00000005588	ddx54	72	79.328	ENSGGOG00000010414	DDX54	67	77.240	Gorilla_gorilla
ENSNBRG00000005588	ddx54	72	78.811	ENSHGLG00000014411	DDX54	64	78.811	Heterocephalus_glaber_female
ENSNBRG00000005588	ddx54	72	78.811	ENSHGLG00100018511	DDX54	64	78.811	Heterocephalus_glaber_male
ENSNBRG00000005588	ddx54	75	92.118	ENSHCOG00000019287	ddx54	69	92.118	Hippocampus_comes
ENSNBRG00000005588	ddx54	88	75.806	ENSIPUG00000015556	Ddx54	78	75.806	Ictalurus_punctatus
ENSNBRG00000005588	ddx54	64	81.529	ENSSTOG00000004068	DDX54	64	81.529	Ictidomys_tridecemlineatus
ENSNBRG00000005588	ddx54	73	79.293	ENSJJAG00000015712	Ddx54	66	78.947	Jaculus_jaculus
ENSNBRG00000005588	ddx54	75	91.872	ENSKMAG00000017520	ddx54	69	91.872	Kryptolebias_marmoratus
ENSNBRG00000005588	ddx54	75	91.626	ENSLBEG00000019480	ddx54	70	91.626	Labrus_bergylta
ENSNBRG00000005588	ddx54	72	82.620	ENSLACG00000008944	DDX54	65	82.620	Latimeria_chalumnae
ENSNBRG00000005588	ddx54	76	87.561	ENSLOCG00000008485	ddx54	70	87.561	Lepisosteus_oculatus
ENSNBRG00000005588	ddx54	82	48.788	ENSLAFG00000027782	DDX54	64	62.500	Loxodonta_africana
ENSNBRG00000005588	ddx54	73	78.392	ENSMFAG00000043636	DDX54	67	77.724	Macaca_fascicularis
ENSNBRG00000005588	ddx54	73	78.392	ENSMMUG00000021795	DDX54	67	77.724	Macaca_mulatta
ENSNBRG00000005588	ddx54	73	66.917	ENSMNEG00000043605	DDX54	67	66.667	Macaca_nemestrina
ENSNBRG00000005588	ddx54	73	72.111	ENSMLEG00000038981	DDX54	66	71.671	Mandrillus_leucophaeus
ENSNBRG00000005588	ddx54	75	94.581	ENSMAMG00000012784	ddx54	69	94.581	Mastacembelus_armatus
ENSNBRG00000005588	ddx54	75	99.259	ENSMZEG00005018773	ddx54	70	99.259	Maylandia_zebra
ENSNBRG00000005588	ddx54	70	80.663	ENSMGAG00000009183	DDX54	66	80.663	Meleagris_gallopavo
ENSNBRG00000005588	ddx54	73	79.442	ENSMAUG00000011051	Ddx54	66	79.442	Mesocricetus_auratus
ENSNBRG00000005588	ddx54	75	76.513	ENSMICG00000012217	DDX54	68	76.271	Microcebus_murinus
ENSNBRG00000005588	ddx54	75	77.913	ENSMOCG00000010835	Ddx54	66	78.750	Microtus_ochrogaster
ENSNBRG00000005588	ddx54	73	90.148	ENSMMOG00000009634	ddx54	70	90.148	Mola_mola
ENSNBRG00000005588	ddx54	70	81.793	ENSMODG00000003413	DDX54	66	81.793	Monodelphis_domestica
ENSNBRG00000005588	ddx54	75	94.335	ENSMALG00000022098	ddx54	69	94.335	Monopterus_albus
ENSNBRG00000005588	ddx54	74	78.086	MGP_CAROLIEiJ_G0027665	Ddx54	66	78.000	Mus_caroli
ENSNBRG00000005588	ddx54	74	78.589	ENSMUSG00000029599	Ddx54	66	78.500	Mus_musculus
ENSNBRG00000005588	ddx54	73	79.082	MGP_PahariEiJ_G0024247	Ddx54	66	78.000	Mus_pahari
ENSNBRG00000005588	ddx54	91	63.534	MGP_SPRETEiJ_G0028665	Ddx54	77	63.551	Mus_spretus
ENSNBRG00000005588	ddx54	72	79.016	ENSMPUG00000002574	DDX54	67	76.755	Mustela_putorius_furo
ENSNBRG00000005588	ddx54	75	55.068	ENSMLUG00000004684	-	99	81.081	Myotis_lucifugus
ENSNBRG00000005588	ddx54	73	78.173	ENSNGAG00000021313	Ddx54	65	78.173	Nannospalax_galili
ENSNBRG00000005588	ddx54	72	79.328	ENSNLEG00000000162	DDX54	64	79.328	Nomascus_leucogenys
ENSNBRG00000005588	ddx54	55	82.663	ENSMEUG00000015392	DDX54	59	82.663	Notamacropus_eugenii
ENSNBRG00000005588	ddx54	62	79.667	ENSOPRG00000012000	DDX54	55	79.667	Ochotona_princeps
ENSNBRG00000005588	ddx54	72	74.870	ENSODEG00000014863	DDX54	64	74.935	Octodon_degus
ENSNBRG00000005588	ddx54	74	75.377	ENSOCUG00000008932	DDX54	67	74.818	Oryctolagus_cuniculus
ENSNBRG00000005588	ddx54	75	91.872	ENSORLG00000007385	ddx54	77	91.872	Oryzias_latipes
ENSNBRG00000005588	ddx54	75	92.118	ENSORLG00020000858	ddx54	69	92.118	Oryzias_latipes_hni
ENSNBRG00000005588	ddx54	75	91.872	ENSORLG00015006956	ddx54	77	91.872	Oryzias_latipes_hsok
ENSNBRG00000005588	ddx54	73	93.333	ENSOMEG00000003663	ddx54	69	93.333	Oryzias_melastigma
ENSNBRG00000005588	ddx54	72	79.587	ENSOGAG00000004210	DDX54	67	77.482	Otolemur_garnettii
ENSNBRG00000005588	ddx54	73	78.894	ENSOARG00000008363	DDX54	66	78.750	Ovis_aries
ENSNBRG00000005588	ddx54	72	79.070	ENSPPAG00000042178	DDX54	67	76.998	Pan_paniscus
ENSNBRG00000005588	ddx54	74	73.618	ENSPPRG00000005223	DDX54	67	73.671	Panthera_pardus
ENSNBRG00000005588	ddx54	52	86.458	ENSPTIG00000019728	DDX54	65	86.010	Panthera_tigris_altaica
ENSNBRG00000005588	ddx54	72	79.070	ENSPTRG00000005483	DDX54	67	76.998	Pan_troglodytes
ENSNBRG00000005588	ddx54	73	78.392	ENSPANG00000008883	DDX54	67	77.724	Papio_anubis
ENSNBRG00000005588	ddx54	75	89.655	ENSPKIG00000018272	ddx54	67	89.655	Paramormyrops_kingsleyae
ENSNBRG00000005588	ddx54	75	59.310	ENSPSIG00000005055	DDX54	71	85.088	Pelodiscus_sinensis
ENSNBRG00000005588	ddx54	95	61.278	ENSPMGG00000010988	ddx54	99	61.021	Periophthalmus_magnuspinnatus
ENSNBRG00000005588	ddx54	75	77.913	ENSPEMG00000016701	Ddx54	66	78.750	Peromyscus_maniculatus_bairdii
ENSNBRG00000005588	ddx54	83	55.172	ENSPMAG00000004337	ddx54	90	82.451	Petromyzon_marinus
ENSNBRG00000005588	ddx54	75	93.103	ENSPFOG00000019822	ddx54	72	93.103	Poecilia_formosa
ENSNBRG00000005588	ddx54	75	92.857	ENSPLAG00000004530	ddx54	79	92.857	Poecilia_latipinna
ENSNBRG00000005588	ddx54	75	92.611	ENSPMEG00000010803	ddx54	72	92.611	Poecilia_mexicana
ENSNBRG00000005588	ddx54	86	93.350	ENSPREG00000014372	ddx54	79	93.350	Poecilia_reticulata
ENSNBRG00000005588	ddx54	72	79.587	ENSPPYG00000004984	DDX54	67	77.482	Pongo_abelii
ENSNBRG00000005588	ddx54	72	71.576	ENSPCAG00000008462	DDX54	65	71.576	Procavia_capensis
ENSNBRG00000005588	ddx54	73	77.330	ENSPCOG00000006050	DDX54	67	76.513	Propithecus_coquereli
ENSNBRG00000005588	ddx54	61	81.439	ENSPVAG00000017347	DDX54	56	80.287	Pteropus_vampyrus
ENSNBRG00000005588	ddx54	86	71.457	ENSPNAG00000014459	ddx54	71	78.138	Pygocentrus_nattereri
ENSNBRG00000005588	ddx54	73	78.841	ENSRNOG00000001377	Ddx54	63	78.500	Rattus_norvegicus
ENSNBRG00000005588	ddx54	75	76.998	ENSRBIG00000032535	DDX54	65	78.141	Rhinopithecus_bieti
ENSNBRG00000005588	ddx54	75	69.324	ENSRROG00000029557	DDX54	64	70.175	Rhinopithecus_roxellana
ENSNBRG00000005588	ddx54	72	79.587	ENSSBOG00000028194	DDX54	67	77.482	Saimiri_boliviensis_boliviensis
ENSNBRG00000005588	ddx54	72	83.333	ENSSHAG00000015646	DDX54	70	83.333	Sarcophilus_harrisii
ENSNBRG00000005588	ddx54	72	92.063	ENSSFOG00015014981	ddx54	69	88.206	Scleropages_formosus
ENSNBRG00000005588	ddx54	73	91.892	ENSSMAG00000003210	ddx54	72	91.892	Scophthalmus_maximus
ENSNBRG00000005588	ddx54	73	92.118	ENSSDUG00000004474	ddx54	70	92.118	Seriola_dumerili
ENSNBRG00000005588	ddx54	75	91.872	ENSSLDG00000010380	ddx54	71	91.872	Seriola_lalandi_dorsalis
ENSNBRG00000005588	ddx54	73	78.906	ENSSPUG00000014141	DDX54	66	78.906	Sphenodon_punctatus
ENSNBRG00000005588	ddx54	68	89.835	ENSSPAG00000022918	ddx54	67	89.835	Stegastes_partitus
ENSNBRG00000005588	ddx54	73	79.093	ENSSSCG00000009876	DDX54	67	78.398	Sus_scrofa
ENSNBRG00000005588	ddx54	68	80.627	ENSTGUG00000009126	DDX54	66	80.627	Taeniopygia_guttata
ENSNBRG00000005588	ddx54	75	90.617	ENSTRUG00000014939	ddx54	69	90.617	Takifugu_rubripes
ENSNBRG00000005588	ddx54	75	88.889	ENSTNIG00000009037	ddx54	69	88.889	Tetraodon_nigroviridis
ENSNBRG00000005588	ddx54	55	81.148	ENSTBEG00000003783	DDX54	52	81.148	Tupaia_belangeri
ENSNBRG00000005588	ddx54	73	73.116	ENSTTRG00000016678	DDX54	67	72.639	Tursiops_truncatus
ENSNBRG00000005588	ddx54	73	78.517	ENSUAMG00000028387	DDX54	68	80.447	Ursus_americanus
ENSNBRG00000005588	ddx54	65	81.148	ENSUMAG00000010245	DDX54	60	81.322	Ursus_maritimus
ENSNBRG00000005588	ddx54	75	77.240	ENSVVUG00000010212	DDX54	67	76.585	Vulpes_vulpes
ENSNBRG00000005588	ddx54	77	78.272	ENSXETG00000016410	ddx54	70	78.272	Xenopus_tropicalis
ENSNBRG00000005588	ddx54	86	93.580	ENSXCOG00000002909	ddx54	79	93.580	Xiphophorus_couchianus
ENSNBRG00000005588	ddx54	86	93.580	ENSXMAG00000005312	ddx54	79	93.580	Xiphophorus_maculatus