EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000005638 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: H/ACA ribonucleoprotein complex subunit 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3166 bases
Position: chrJH422346.1:51247-54412
Accession: 102780436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007200	TruB_N	PF01509.18	3.2e-21	1	1
ENSNBRP00000007200	PUA	PF01472.20	4.4e-17	1	1
ENSNBRP00000007200	DKCLD	PF08068.12	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007403	-	1488	XM_006800567	ENSNBRP00000007200	495 (aa)	XP_006800630	-

Gene Model

Click here to download ENSNBRG00000005638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005638	dkc1	81	86.717	ENSG00000130826	DKC1	99	88.350	Homo_sapiens
ENSNBRG00000005638	dkc1	80	95.696	ENSAPOG00000007799	dkc1	78	95.696	Acanthochromis_polyacanthus
ENSNBRG00000005638	dkc1	80	87.121	ENSAMEG00000002776	DKC1	78	87.121	Ailuropoda_melanoleuca
ENSNBRG00000005638	dkc1	83	96.852	ENSACIG00000022614	dkc1	93	90.850	Amphilophus_citrinellus
ENSNBRG00000005638	dkc1	80	95.443	ENSAOCG00000013159	dkc1	81	94.236	Amphiprion_ocellaris
ENSNBRG00000005638	dkc1	82	93.812	ENSAPEG00000002284	dkc1	82	93.120	Amphiprion_percula
ENSNBRG00000005638	dkc1	81	92.383	ENSATEG00000013682	dkc1	82	91.686	Anabas_testudineus
ENSNBRG00000005638	dkc1	82	85.644	ENSACAG00000015600	DKC1	69	86.070	Anolis_carolinensis
ENSNBRG00000005638	dkc1	80	87.186	ENSANAG00000022732	DKC1	77	87.626	Aotus_nancymaae
ENSNBRG00000005638	dkc1	93	96.514	ENSACLG00000015605	dkc1	93	96.514	Astatotilapia_calliptera
ENSNBRG00000005638	dkc1	80	92.714	ENSAMXG00000017108	dkc1	79	92.947	Astyanax_mexicanus
ENSNBRG00000005638	dkc1	80	86.181	ENSBTAG00000013045	DKC1	78	86.616	Bos_taurus
ENSNBRG00000005638	dkc1	81	66.005	WBGene00010478	K01G5.5	88	66.667	Caenorhabditis_elegans
ENSNBRG00000005638	dkc1	80	87.121	ENSCJAG00000004210	DKC1	77	87.121	Callithrix_jacchus
ENSNBRG00000005638	dkc1	80	86.616	ENSCAFG00000019620	-	77	86.616	Canis_familiaris
ENSNBRG00000005638	dkc1	80	77.215	ENSCAFG00000009311	-	78	77.215	Canis_familiaris
ENSNBRG00000005638	dkc1	80	86.616	ENSCAFG00020008918	-	77	86.616	Canis_lupus_dingo
ENSNBRG00000005638	dkc1	80	76.203	ENSCAFG00020009379	-	75	76.203	Canis_lupus_dingo
ENSNBRG00000005638	dkc1	80	86.181	ENSCHIG00000017392	DKC1	78	86.616	Capra_hircus
ENSNBRG00000005638	dkc1	80	87.121	ENSTSYG00000007681	DKC1	76	87.121	Carlito_syrichta
ENSNBRG00000005638	dkc1	74	88.251	ENSCAPG00000003342	DKC1	82	88.950	Cavia_aperea
ENSNBRG00000005638	dkc1	80	86.935	ENSCPOG00000008825	DKC1	77	87.374	Cavia_porcellus
ENSNBRG00000005638	dkc1	80	76.382	ENSCCAG00000027418	DKC1	75	76.768	Cebus_capucinus
ENSNBRG00000005638	dkc1	80	86.869	ENSCATG00000033602	DKC1	77	86.869	Cercocebus_atys
ENSNBRG00000005638	dkc1	80	87.186	ENSCLAG00000000720	DKC1	78	87.626	Chinchilla_lanigera
ENSNBRG00000005638	dkc1	80	86.869	ENSCSAG00000006706	DKC1	77	86.869	Chlorocebus_sabaeus
ENSNBRG00000005638	dkc1	80	87.563	ENSCPBG00000005858	DKC1	85	87.121	Chrysemys_picta_bellii
ENSNBRG00000005638	dkc1	79	80.662	ENSCING00000004599	-	76	80.000	Ciona_intestinalis
ENSNBRG00000005638	dkc1	80	79.899	ENSCSAVG00000010047	-	90	79.052	Ciona_savignyi
ENSNBRG00000005638	dkc1	80	86.869	ENSCANG00000027987	DKC1	77	86.869	Colobus_angolensis_palliatus
ENSNBRG00000005638	dkc1	80	86.432	ENSCGRG00001014574	-	77	86.869	Cricetulus_griseus_chok1gshd
ENSNBRG00000005638	dkc1	78	66.062	ENSCGRG00001016789	-	79	67.297	Cricetulus_griseus_chok1gshd
ENSNBRG00000005638	dkc1	78	66.062	ENSCGRG00000014809	-	77	67.297	Cricetulus_griseus_crigri
ENSNBRG00000005638	dkc1	80	86.432	ENSCGRG00000016075	-	77	86.869	Cricetulus_griseus_crigri
ENSNBRG00000005638	dkc1	82	92.840	ENSCSEG00000012633	dkc1	85	92.982	Cynoglossus_semilaevis
ENSNBRG00000005638	dkc1	81	93.734	ENSCVAG00000010155	dkc1	81	92.289	Cyprinodon_variegatus
ENSNBRG00000005638	dkc1	83	90.976	ENSDARG00000016484	dkc1	85	86.697	Danio_rerio
ENSNBRG00000005638	dkc1	80	87.186	ENSDNOG00000004218	DKC1	77	87.406	Dasypus_novemcinctus
ENSNBRG00000005638	dkc1	56	72.401	ENSDORG00000013566	-	91	72.924	Dipodomys_ordii
ENSNBRG00000005638	dkc1	80	74.177	FBgn0259937	Nop60B	88	70.500	Drosophila_melanogaster
ENSNBRG00000005638	dkc1	80	85.176	ENSETEG00000016095	DKC1	80	85.606	Echinops_telfairi
ENSNBRG00000005638	dkc1	66	78.116	ENSEBUG00000015962	dkc1	98	82.131	Eptatretus_burgeri
ENSNBRG00000005638	dkc1	80	86.616	ENSEASG00005007484	DKC1	76	86.616	Equus_asinus_asinus
ENSNBRG00000005638	dkc1	80	86.616	ENSECAG00000023524	DKC1	76	86.616	Equus_caballus
ENSNBRG00000005638	dkc1	78	87.629	ENSEEUG00000003323	DKC1	91	87.629	Erinaceus_europaeus
ENSNBRG00000005638	dkc1	81	93.000	ENSELUG00000014538	dkc1	80	93.216	Esox_lucius
ENSNBRG00000005638	dkc1	80	86.181	ENSFCAG00000006577	DKC1	78	86.398	Felis_catus
ENSNBRG00000005638	dkc1	90	80.088	ENSFALG00000011496	DKC1	86	80.088	Ficedula_albicollis
ENSNBRG00000005638	dkc1	83	84.019	ENSFDAG00000002516	DKC1	83	84.428	Fukomys_damarensis
ENSNBRG00000005638	dkc1	80	94.162	ENSFHEG00000004627	dkc1	79	93.703	Fundulus_heteroclitus
ENSNBRG00000005638	dkc1	79	90.026	ENSGMOG00000017277	dkc1	100	90.026	Gadus_morhua
ENSNBRG00000005638	dkc1	80	88.665	ENSGALG00000005054	DKC1	77	88.665	Gallus_gallus
ENSNBRG00000005638	dkc1	80	95.696	ENSGAFG00000011486	dkc1	68	95.696	Gambusia_affinis
ENSNBRG00000005638	dkc1	80	94.221	ENSGACG00000004373	dkc1	96	94.833	Gasterosteus_aculeatus
ENSNBRG00000005638	dkc1	80	88.071	ENSGAGG00000011330	DKC1	76	88.071	Gopherus_agassizii
ENSNBRG00000005638	dkc1	80	87.121	ENSGGOG00000001045	DKC1	77	87.121	Gorilla_gorilla
ENSNBRG00000005638	dkc1	85	97.381	ENSHBUG00000012436	dkc1	84	97.381	Haplochromis_burtoni
ENSNBRG00000005638	dkc1	80	86.181	ENSHGLG00000000649	DKC1	77	86.616	Heterocephalus_glaber_female
ENSNBRG00000005638	dkc1	80	86.181	ENSHGLG00100001153	DKC1	77	86.616	Heterocephalus_glaber_male
ENSNBRG00000005638	dkc1	80	93.418	ENSHCOG00000021099	dkc1	78	93.418	Hippocampus_comes
ENSNBRG00000005638	dkc1	79	93.384	ENSIPUG00000010309	dkc1	77	92.443	Ictalurus_punctatus
ENSNBRG00000005638	dkc1	80	74.874	ENSSTOG00000011904	-	72	75.253	Ictidomys_tridecemlineatus
ENSNBRG00000005638	dkc1	80	86.432	ENSSTOG00000001074	-	81	86.869	Ictidomys_tridecemlineatus
ENSNBRG00000005638	dkc1	80	78.392	ENSSTOG00000020149	-	78	78.788	Ictidomys_tridecemlineatus
ENSNBRG00000005638	dkc1	56	73.285	ENSJJAG00000010086	-	92	73.285	Jaculus_jaculus
ENSNBRG00000005638	dkc1	80	92.405	ENSKMAG00000008010	dkc1	80	92.191	Kryptolebias_marmoratus
ENSNBRG00000005638	dkc1	80	94.670	ENSLBEG00000019122	dkc1	82	94.710	Labrus_bergylta
ENSNBRG00000005638	dkc1	82	85.222	ENSLACG00000014025	DKC1	90	86.869	Latimeria_chalumnae
ENSNBRG00000005638	dkc1	80	91.960	ENSLOCG00000013713	dkc1	80	93.782	Lepisosteus_oculatus
ENSNBRG00000005638	dkc1	80	86.683	ENSLAFG00000000221	DKC1	77	86.902	Loxodonta_africana
ENSNBRG00000005638	dkc1	80	86.869	ENSMFAG00000032398	DKC1	66	86.869	Macaca_fascicularis
ENSNBRG00000005638	dkc1	80	86.869	ENSMMUG00000005768	DKC1	77	86.869	Macaca_mulatta
ENSNBRG00000005638	dkc1	80	86.869	ENSMNEG00000034503	DKC1	77	86.869	Macaca_nemestrina
ENSNBRG00000005638	dkc1	80	86.869	ENSMLEG00000034422	DKC1	77	86.869	Mandrillus_leucophaeus
ENSNBRG00000005638	dkc1	84	94.498	ENSMAMG00000005427	dkc1	92	94.903	Mastacembelus_armatus
ENSNBRG00000005638	dkc1	85	97.619	ENSMZEG00005014503	dkc1	84	97.619	Maylandia_zebra
ENSNBRG00000005638	dkc1	73	90.909	ENSMGAG00000009238	DKC1	79	90.909	Meleagris_gallopavo
ENSNBRG00000005638	dkc1	56	71.685	ENSMAUG00000016454	-	91	72.202	Mesocricetus_auratus
ENSNBRG00000005638	dkc1	80	85.930	ENSMICG00000038751	-	79	86.364	Microcebus_murinus
ENSNBRG00000005638	dkc1	73	79.396	ENSMICG00000002818	-	99	76.986	Microcebus_murinus
ENSNBRG00000005638	dkc1	56	68.100	ENSMOCG00000001169	-	91	68.592	Microtus_ochrogaster
ENSNBRG00000005638	dkc1	83	94.390	ENSMMOG00000020348	dkc1	87	94.975	Mola_mola
ENSNBRG00000005638	dkc1	79	87.277	ENSMODG00000009243	DKC1	68	87.277	Monodelphis_domestica
ENSNBRG00000005638	dkc1	83	93.674	ENSMALG00000009454	dkc1	78	94.207	Monopterus_albus
ENSNBRG00000005638	dkc1	80	74.257	MGP_CAROLIEiJ_G0033191	Dkc1	86	82.540	Mus_caroli
ENSNBRG00000005638	dkc1	80	86.432	ENSMUSG00000031403	Dkc1	78	86.869	Mus_musculus
ENSNBRG00000005638	dkc1	80	85.930	MGP_PahariEiJ_G0031735	Dkc1	77	86.364	Mus_pahari
ENSNBRG00000005638	dkc1	80	86.432	MGP_SPRETEiJ_G0034351	Dkc1	78	86.869	Mus_spretus
ENSNBRG00000005638	dkc1	80	86.432	ENSMPUG00000016136	DKC1	73	86.869	Mustela_putorius_furo
ENSNBRG00000005638	dkc1	80	82.915	ENSMLUG00000011918	DKC1	76	83.333	Myotis_lucifugus
ENSNBRG00000005638	dkc1	56	72.760	ENSNGAG00000015724	-	92	73.285	Nannospalax_galili
ENSNBRG00000005638	dkc1	80	87.121	ENSNLEG00000014323	DKC1	77	87.121	Nomascus_leucogenys
ENSNBRG00000005638	dkc1	80	82.663	ENSMEUG00000001066	DKC1	87	83.081	Notamacropus_eugenii
ENSNBRG00000005638	dkc1	70	80.172	ENSOPRG00000005248	DKC1	69	80.172	Ochotona_princeps
ENSNBRG00000005638	dkc1	80	87.940	ENSODEG00000011816	-	78	88.384	Octodon_degus
ENSNBRG00000005638	dkc1	56	72.401	ENSODEG00000000549	-	91	72.924	Octodon_degus
ENSNBRG00000005638	dkc1	85	97.381	ENSONIG00000013889	dkc1	84	97.381	Oreochromis_niloticus
ENSNBRG00000005638	dkc1	80	89.086	ENSOANG00000008713	-	81	89.086	Ornithorhynchus_anatinus
ENSNBRG00000005638	dkc1	80	86.582	ENSOCUG00000012646	DKC1	77	86.582	Oryctolagus_cuniculus
ENSNBRG00000005638	dkc1	79	93.130	ENSORLG00000018748	dkc1	78	92.443	Oryzias_latipes
ENSNBRG00000005638	dkc1	80	92.211	ENSOMEG00000005786	dkc1	88	87.500	Oryzias_melastigma
ENSNBRG00000005638	dkc1	80	87.626	ENSOGAG00000003399	DKC1	76	87.626	Otolemur_garnettii
ENSNBRG00000005638	dkc1	80	86.432	ENSOARG00000003047	DKC1	78	86.869	Ovis_aries
ENSNBRG00000005638	dkc1	80	87.121	ENSPPAG00000023820	DKC1	77	87.121	Pan_paniscus
ENSNBRG00000005638	dkc1	80	86.181	ENSPPRG00000009104	DKC1	78	86.398	Panthera_pardus
ENSNBRG00000005638	dkc1	80	86.181	ENSPTIG00000017469	DKC1	80	86.398	Panthera_tigris_altaica
ENSNBRG00000005638	dkc1	80	87.121	ENSPTRG00000022449	DKC1	77	87.121	Pan_troglodytes
ENSNBRG00000005638	dkc1	80	86.683	ENSPTRG00000043416	-	67	87.121	Pan_troglodytes
ENSNBRG00000005638	dkc1	80	86.869	ENSPANG00000011978	DKC1	77	86.869	Papio_anubis
ENSNBRG00000005638	dkc1	80	92.191	ENSPKIG00000008443	dkc1	84	92.191	Paramormyrops_kingsleyae
ENSNBRG00000005638	dkc1	72	90.196	ENSPSIG00000013765	DKC1	86	89.944	Pelodiscus_sinensis
ENSNBRG00000005638	dkc1	81	88.221	ENSPMGG00000004097	dkc1	77	87.321	Periophthalmus_magnuspinnatus
ENSNBRG00000005638	dkc1	64	83.908	ENSPEMG00000013348	Dkc1	73	87.586	Peromyscus_maniculatus_bairdii
ENSNBRG00000005638	dkc1	85	83.610	ENSPCIG00000016706	DKC1	70	84.010	Phascolarctos_cinereus
ENSNBRG00000005638	dkc1	80	95.960	ENSPFOG00000018653	dkc1	79	95.960	Poecilia_formosa
ENSNBRG00000005638	dkc1	80	95.960	ENSPLAG00000003272	dkc1	72	95.960	Poecilia_latipinna
ENSNBRG00000005638	dkc1	80	95.960	ENSPMEG00000010413	dkc1	79	95.960	Poecilia_mexicana
ENSNBRG00000005638	dkc1	80	95.729	ENSPREG00000004100	dkc1	78	95.729	Poecilia_reticulata
ENSNBRG00000005638	dkc1	80	87.121	ENSPPYG00000020892	DKC1	78	87.121	Pongo_abelii
ENSNBRG00000005638	dkc1	73	88.122	ENSPCAG00000015034	DKC1	71	88.122	Procavia_capensis
ENSNBRG00000005638	dkc1	80	86.869	ENSPCOG00000026874	DKC1	77	86.869	Propithecus_coquereli
ENSNBRG00000005638	dkc1	80	85.678	ENSPVAG00000009222	DKC1	79	86.111	Pteropus_vampyrus
ENSNBRG00000005638	dkc1	90	98.430	ENSPNYG00000020063	dkc1	89	98.430	Pundamilia_nyererei
ENSNBRG00000005638	dkc1	84	90.238	ENSPNAG00000005780	dkc1	84	90.024	Pygocentrus_nattereri
ENSNBRG00000005638	dkc1	80	82.872	ENSRNOG00000055562	Dkc1	78	82.872	Rattus_norvegicus
ENSNBRG00000005638	dkc1	80	86.869	ENSRBIG00000028457	DKC1	66	86.869	Rhinopithecus_bieti
ENSNBRG00000005638	dkc1	80	86.869	ENSRROG00000044780	DKC1	77	86.869	Rhinopithecus_roxellana
ENSNBRG00000005638	dkc1	77	71.802	YLR175W	-	79	71.802	Saccharomyces_cerevisiae
ENSNBRG00000005638	dkc1	80	87.121	ENSSBOG00000033746	DKC1	77	87.121	Saimiri_boliviensis_boliviensis
ENSNBRG00000005638	dkc1	80	86.683	ENSSHAG00000002463	DKC1	84	87.121	Sarcophilus_harrisii
ENSNBRG00000005638	dkc1	80	92.462	ENSSFOG00015009585	dkc1	80	89.614	Scleropages_formosus
ENSNBRG00000005638	dkc1	83	91.727	ENSSMAG00000002552	dkc1	79	93.622	Scophthalmus_maximus
ENSNBRG00000005638	dkc1	79	94.911	ENSSDUG00000009963	dkc1	82	94.390	Seriola_dumerili
ENSNBRG00000005638	dkc1	80	94.670	ENSSLDG00000019342	dkc1	87	93.269	Seriola_lalandi_dorsalis
ENSNBRG00000005638	dkc1	80	82.915	ENSSARG00000001822	DKC1	79	82.872	Sorex_araneus
ENSNBRG00000005638	dkc1	80	86.364	ENSSPUG00000018907	DKC1	75	86.364	Sphenodon_punctatus
ENSNBRG00000005638	dkc1	82	94.568	ENSSPAG00000002585	dkc1	80	93.602	Stegastes_partitus
ENSNBRG00000005638	dkc1	81	86.250	ENSSSCG00000012823	DKC1	83	86.869	Sus_scrofa
ENSNBRG00000005638	dkc1	79	86.923	ENSTGUG00000006781	DKC1	80	92.011	Taeniopygia_guttata
ENSNBRG00000005638	dkc1	80	94.416	ENSTRUG00000004413	dkc1	79	94.416	Takifugu_rubripes
ENSNBRG00000005638	dkc1	80	77.057	ENSTNIG00000002582	dkc1	78	77.057	Tetraodon_nigroviridis
ENSNBRG00000005638	dkc1	54	86.989	ENSTBEG00000011262	DKC1	74	86.989	Tupaia_belangeri
ENSNBRG00000005638	dkc1	56	87.004	ENSTTRG00000008089	DKC1	55	87.004	Tursiops_truncatus
ENSNBRG00000005638	dkc1	81	86.216	ENSUAMG00000022721	DKC1	83	86.616	Ursus_americanus
ENSNBRG00000005638	dkc1	80	85.678	ENSUMAG00000016899	DKC1	93	88.391	Ursus_maritimus
ENSNBRG00000005638	dkc1	80	70.960	ENSVVUG00000021671	-	73	70.960	Vulpes_vulpes
ENSNBRG00000005638	dkc1	80	84.691	ENSVVUG00000020734	-	69	85.112	Vulpes_vulpes
ENSNBRG00000005638	dkc1	84	87.321	ENSXETG00000032517	DKC1	83	87.321	Xenopus_tropicalis
ENSNBRG00000005638	dkc1	81	95.262	ENSXCOG00000005498	dkc1	85	95.477	Xiphophorus_couchianus
ENSNBRG00000005638	dkc1	80	95.226	ENSXMAG00000004919	dkc1	83	93.253	Xiphophorus_maculatus