EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000005683 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 9061 bases
Position: chrJH422378.1:2011490-2020550
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007382	zf-CCHC	PF00098.23	7.2e-07	1	2
ENSNBRP00000007382	zf-CCHC	PF00098.23	7.2e-07	2	2
ENSNBRP00000007359	zf-CCHC	PF00098.23	8.3e-07	1	2
ENSNBRP00000007359	zf-CCHC	PF00098.23	8.3e-07	2	2
ENSNBRP00000007382	PAP_assoc	PF03828.19	7.7e-16	1	1
ENSNBRP00000007359	PAP_assoc	PF03828.19	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007589	-	1920	-	ENSNBRP00000007382	639 (aa)	-	-
ENSNBRT00000007566	-	2001	-	ENSNBRP00000007359	666 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000005683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000005683	-	57	65.985	ENSNBRG00000021961	TUT7	54	65.473

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005683	-	95	63.524	ENSG00000134744	TUT4	98	60.778	Homo_sapiens
ENSNBRG00000005683	-	57	78.962	ENSAPOG00000018983	-	99	78.962	Acanthochromis_polyacanthus
ENSNBRG00000005683	-	95	63.833	ENSAMEG00000009340	TUT4	58	64.297	Ailuropoda_melanoleuca
ENSNBRG00000005683	-	100	88.743	ENSACIG00000018199	TUT4	99	87.427	Amphilophus_citrinellus
ENSNBRG00000005683	-	51	73.620	ENSACIG00000018887	-	63	62.271	Amphilophus_citrinellus
ENSNBRG00000005683	-	100	88.889	ENSAOCG00000007862	TUT4	63	88.889	Amphiprion_ocellaris
ENSNBRG00000005683	-	100	89.035	ENSAPEG00000019857	TUT4	66	89.035	Amphiprion_percula
ENSNBRG00000005683	-	100	87.281	ENSATEG00000003823	TUT4	66	87.281	Anabas_testudineus
ENSNBRG00000005683	-	57	67.273	ENSATEG00000022516	-	93	56.598	Anabas_testudineus
ENSNBRG00000005683	-	96	67.555	ENSAPLG00000006345	TUT4	60	67.773	Anas_platyrhynchos
ENSNBRG00000005683	-	100	62.979	ENSACAG00000008282	TUT4	61	63.111	Anolis_carolinensis
ENSNBRG00000005683	-	95	60.256	ENSANAG00000013486	TUT4	50	88.070	Aotus_nancymaae
ENSNBRG00000005683	-	100	96.193	ENSACLG00000023312	TUT4	67	96.193	Astatotilapia_calliptera
ENSNBRG00000005683	-	100	71.768	ENSAMXG00000007030	TUT4	64	72.511	Astyanax_mexicanus
ENSNBRG00000005683	-	95	64.019	ENSBTAG00000002721	TUT4	58	64.486	Bos_taurus
ENSNBRG00000005683	-	95	63.003	ENSCJAG00000021588	TUT4	56	67.800	Callithrix_jacchus
ENSNBRG00000005683	-	95	63.679	ENSCAFG00000003734	TUT4	58	63.988	Canis_familiaris
ENSNBRG00000005683	-	89	67.530	ENSCAFG00020010923	-	94	67.358	Canis_lupus_dingo
ENSNBRG00000005683	-	100	61.111	ENSCHIG00000023944	TUT4	57	63.509	Capra_hircus
ENSNBRG00000005683	-	95	63.215	ENSTSYG00000009885	TUT4	58	63.679	Carlito_syrichta
ENSNBRG00000005683	-	95	56.897	ENSCAPG00000005680	TUT4	62	57.524	Cavia_aperea
ENSNBRG00000005683	-	95	62.656	ENSCPOG00000005086	TUT4	60	63.453	Cavia_porcellus
ENSNBRG00000005683	-	51	67.816	ENSCCAG00000025142	-	69	60.841	Cebus_capucinus
ENSNBRG00000005683	-	64	75.410	ENSCCAG00000036903	TUT4	52	76.581	Cebus_capucinus
ENSNBRG00000005683	-	95	63.679	ENSCATG00000024618	TUT4	54	71.715	Cercocebus_atys
ENSNBRG00000005683	-	95	63.994	ENSCLAG00000005255	TUT4	57	64.623	Chinchilla_lanigera
ENSNBRG00000005683	-	95	63.679	ENSCSAG00000001277	TUT4	58	63.679	Chlorocebus_sabaeus
ENSNBRG00000005683	-	100	84.960	ENSCPBG00000014796	TUT4	58	84.697	Chrysemys_picta_bellii
ENSNBRG00000005683	-	95	63.037	ENSCANG00000036212	TUT4	58	63.037	Colobus_angolensis_palliatus
ENSNBRG00000005683	-	95	63.465	ENSCGRG00001020315	-	57	64.511	Cricetulus_griseus_chok1gshd
ENSNBRG00000005683	-	95	63.465	ENSCGRG00000017571	Tut4	57	64.511	Cricetulus_griseus_crigri
ENSNBRG00000005683	-	100	83.407	ENSCSEG00000002476	TUT4	100	83.752	Cynoglossus_semilaevis
ENSNBRG00000005683	-	100	82.698	ENSCVAG00000012659	TUT4	66	82.258	Cyprinodon_variegatus
ENSNBRG00000005683	-	100	71.257	ENSDARG00000101404	CABZ01065131.1	100	71.622	Danio_rerio
ENSNBRG00000005683	-	95	63.524	ENSDNOG00000013920	TUT4	57	63.679	Dasypus_novemcinctus
ENSNBRG00000005683	-	95	63.950	ENSDORG00000027891	Tut4	57	64.577	Dipodomys_ordii
ENSNBRG00000005683	-	59	61.358	ENSEBUG00000009834	TUT4	61	61.358	Eptatretus_burgeri
ENSNBRG00000005683	-	95	64.330	ENSECAG00000021261	TUT4	57	64.486	Equus_caballus
ENSNBRG00000005683	-	100	72.779	ENSELUG00000024167	TUT4	65	73.938	Esox_lucius
ENSNBRG00000005683	-	95	63.988	ENSFCAG00000003246	TUT4	58	64.297	Felis_catus
ENSNBRG00000005683	-	100	64.801	ENSFALG00000005607	TUT4	61	64.801	Ficedula_albicollis
ENSNBRG00000005683	-	95	64.019	ENSFDAG00000016676	TUT4	57	63.863	Fukomys_damarensis
ENSNBRG00000005683	-	97	81.679	ENSFHEG00000002296	-	98	80.916	Fundulus_heteroclitus
ENSNBRG00000005683	-	96	73.209	ENSGMOG00000001281	TUT4	73	72.699	Gadus_morhua
ENSNBRG00000005683	-	96	66.357	ENSGALG00000010629	TUT4	61	66.406	Gallus_gallus
ENSNBRG00000005683	-	100	80.826	ENSGAFG00000011427	-	100	80.383	Gambusia_affinis
ENSNBRG00000005683	-	96	83.489	ENSGACG00000005282	-	72	83.489	Gasterosteus_aculeatus
ENSNBRG00000005683	-	96	62.986	ENSGAGG00000020531	TUT4	56	63.208	Gopherus_agassizii
ENSNBRG00000005683	-	92	96.950	ENSHBUG00000008564	-	99	96.950	Haplochromis_burtoni
ENSNBRG00000005683	-	95	64.019	ENSHGLG00000000804	TUT4	57	63.863	Heterocephalus_glaber_female
ENSNBRG00000005683	-	95	64.019	ENSHGLG00100002051	TUT4	58	63.863	Heterocephalus_glaber_male
ENSNBRG00000005683	-	100	76.696	ENSHCOG00000009746	-	100	77.286	Hippocampus_comes
ENSNBRG00000005683	-	100	68.533	ENSIPUG00000002638	zcchc11	64	68.986	Ictalurus_punctatus
ENSNBRG00000005683	-	95	64.019	ENSSTOG00000015611	TUT4	57	64.486	Ictidomys_tridecemlineatus
ENSNBRG00000005683	-	100	83.602	ENSKMAG00000017970	TUT4	100	83.163	Kryptolebias_marmoratus
ENSNBRG00000005683	-	100	87.336	ENSLBEG00000006518	TUT4	65	87.336	Labrus_bergylta
ENSNBRG00000005683	-	100	62.941	ENSLACG00000010748	TUT4	58	64.370	Latimeria_chalumnae
ENSNBRG00000005683	-	100	73.979	ENSLOCG00000006248	TUT4	69	73.828	Lepisosteus_oculatus
ENSNBRG00000005683	-	95	63.988	ENSLAFG00000003763	TUT4	52	75.000	Loxodonta_africana
ENSNBRG00000005683	-	95	63.679	ENSMFAG00000011842	TUT4	58	63.679	Macaca_fascicularis
ENSNBRG00000005683	-	88	65.449	ENSMMUG00000017023	TUT4	57	65.449	Macaca_mulatta
ENSNBRG00000005683	-	95	63.037	ENSMNEG00000009839	TUT4	61	63.037	Macaca_nemestrina
ENSNBRG00000005683	-	95	63.679	ENSMLEG00000036158	TUT4	58	63.679	Mandrillus_leucophaeus
ENSNBRG00000005683	-	100	87.135	ENSMAMG00000014890	TUT4	65	87.135	Mastacembelus_armatus
ENSNBRG00000005683	-	100	96.193	ENSMZEG00005017227	TUT4	65	96.193	Maylandia_zebra
ENSNBRG00000005683	-	95	67.239	ENSMGAG00000011185	TUT4	71	67.453	Meleagris_gallopavo
ENSNBRG00000005683	-	95	63.467	ENSMICG00000015853	TUT4	58	64.087	Microcebus_murinus
ENSNBRG00000005683	-	100	83.125	ENSMMOG00000016870	-	100	86.013	Mola_mola
ENSNBRG00000005683	-	99	61.968	ENSMODG00000000618	TUT4	59	66.091	Monodelphis_domestica
ENSNBRG00000005683	-	100	82.310	ENSMALG00000014488	-	100	82.602	Monopterus_albus
ENSNBRG00000005683	-	96	64.184	MGP_CAROLIEiJ_G0026268	Tut4	57	64.762	Mus_caroli
ENSNBRG00000005683	-	96	64.184	ENSMUSG00000034610	Tut4	57	64.762	Mus_musculus
ENSNBRG00000005683	-	96	63.550	MGP_PahariEiJ_G0028601	Tut4	57	64.603	Mus_pahari
ENSNBRG00000005683	-	96	64.184	MGP_SPRETEiJ_G0027237	Tut4	57	64.762	Mus_spretus
ENSNBRG00000005683	-	95	63.191	ENSMPUG00000006880	TUT4	57	63.507	Mustela_putorius_furo
ENSNBRG00000005683	-	95	63.994	ENSMLUG00000001067	TUT4	57	63.467	Myotis_lucifugus
ENSNBRG00000005683	-	95	64.263	ENSNLEG00000017998	TUT4	58	64.420	Nomascus_leucogenys
ENSNBRG00000005683	-	94	63.591	ENSMEUG00000003865	TUT4	56	63.844	Notamacropus_eugenii
ENSNBRG00000005683	-	95	62.559	ENSODEG00000007328	TUT4	57	63.651	Octodon_degus
ENSNBRG00000005683	-	100	95.614	ENSONIG00000019455	TUT4	72	92.031	Oreochromis_niloticus
ENSNBRG00000005683	-	88	62.768	ENSOANG00000012864	TUT4	58	62.480	Ornithorhynchus_anatinus
ENSNBRG00000005683	-	95	62.848	ENSOCUG00000002390	TUT4	54	73.589	Oryctolagus_cuniculus
ENSNBRG00000005683	-	100	83.594	ENSORLG00000013135	-	100	83.594	Oryzias_latipes
ENSNBRG00000005683	-	100	83.438	ENSORLG00020002631	-	100	83.438	Oryzias_latipes_hni
ENSNBRG00000005683	-	100	84.062	ENSORLG00015001219	-	100	84.062	Oryzias_latipes_hsok
ENSNBRG00000005683	-	100	81.790	ENSOMEG00000015574	-	100	82.280	Oryzias_melastigma
ENSNBRG00000005683	-	95	61.860	ENSOGAG00000005425	TUT4	58	62.481	Otolemur_garnettii
ENSNBRG00000005683	-	95	63.665	ENSOARG00000005494	TUT4	57	64.130	Ovis_aries
ENSNBRG00000005683	-	95	63.037	ENSPPAG00000037653	TUT4	57	66.212	Pan_paniscus
ENSNBRG00000005683	-	95	63.988	ENSPPRG00000020521	TUT4	58	64.297	Panthera_pardus
ENSNBRG00000005683	-	95	63.988	ENSPTIG00000010511	TUT4	58	64.297	Panthera_tigris_altaica
ENSNBRG00000005683	-	95	63.679	ENSPTRG00000000740	TUT4	58	63.679	Pan_troglodytes
ENSNBRG00000005683	-	95	61.196	ENSPANG00000005042	TUT4	58	61.196	Papio_anubis
ENSNBRG00000005683	-	100	70.326	ENSPKIG00000004670	TUT4	94	70.475	Paramormyrops_kingsleyae
ENSNBRG00000005683	-	96	66.719	ENSPSIG00000016704	TUT4	59	66.562	Pelodiscus_sinensis
ENSNBRG00000005683	-	53	94.958	ENSPMGG00000015621	-	68	94.958	Periophthalmus_magnuspinnatus
ENSNBRG00000005683	-	100	61.842	ENSPCIG00000022380	TUT4	60	62.609	Phascolarctos_cinereus
ENSNBRG00000005683	-	100	76.741	ENSPFOG00000002439	TUT4	69	77.177	Poecilia_formosa
ENSNBRG00000005683	-	100	80.059	ENSPLAG00000008701	-	100	80.502	Poecilia_latipinna
ENSNBRG00000005683	-	100	79.911	ENSPMEG00000006996	-	100	80.355	Poecilia_mexicana
ENSNBRG00000005683	-	95	64.019	ENSPPYG00000001347	TUT4	58	64.019	Pongo_abelii
ENSNBRG00000005683	-	96	92.357	ENSPCAG00000013380	TUT4	63	92.994	Procavia_capensis
ENSNBRG00000005683	-	95	63.313	ENSPCOG00000007824	TUT4	60	63.932	Propithecus_coquereli
ENSNBRG00000005683	-	95	63.594	ENSPVAG00000009804	TUT4	59	63.906	Pteropus_vampyrus
ENSNBRG00000005683	-	100	96.340	ENSPNYG00000023175	TUT4	65	96.340	Pundamilia_nyererei
ENSNBRG00000005683	-	100	71.704	ENSPNAG00000022786	TUT4	64	72.889	Pygocentrus_nattereri
ENSNBRG00000005683	-	95	59.196	ENSRBIG00000027989	TUT4	58	59.196	Rhinopithecus_bieti
ENSNBRG00000005683	-	96	63.497	ENSRROG00000034868	TUT4	68	63.679	Rhinopithecus_roxellana
ENSNBRG00000005683	-	95	63.003	ENSSBOG00000013661	TUT4	58	63.467	Saimiri_boliviensis_boliviensis
ENSNBRG00000005683	-	50	73.602	ENSSBOG00000020099	-	72	60.518	Saimiri_boliviensis_boliviensis
ENSNBRG00000005683	-	95	63.679	ENSSHAG00000006231	TUT4	59	64.465	Sarcophilus_harrisii
ENSNBRG00000005683	-	100	71.843	ENSSFOG00015013524	zcchc11	64	72.182	Scleropages_formosus
ENSNBRG00000005683	-	100	85.693	ENSSMAG00000016072	TUT4	65	84.964	Scophthalmus_maximus
ENSNBRG00000005683	-	100	88.321	ENSSDUG00000021923	TUT4	100	87.591	Seriola_dumerili
ENSNBRG00000005683	-	100	88.175	ENSSLDG00000016071	TUT4	65	87.445	Seriola_lalandi_dorsalis
ENSNBRG00000005683	-	100	60.377	ENSSPUG00000013287	TUT4	66	60.000	Sphenodon_punctatus
ENSNBRG00000005683	-	100	82.284	ENSSPAG00000008141	-	100	82.284	Stegastes_partitus
ENSNBRG00000005683	-	95	64.174	ENSSSCG00000003859	TUT4	55	68.347	Sus_scrofa
ENSNBRG00000005683	-	96	67.457	ENSTGUG00000009011	TUT4	60	67.773	Taeniopygia_guttata
ENSNBRG00000005683	-	61	71.694	ENSTRUG00000024719	-	98	71.694	Takifugu_rubripes
ENSNBRG00000005683	-	95	63.679	ENSTTRG00000016142	TUT4	58	63.833	Tursiops_truncatus
ENSNBRG00000005683	-	100	63.733	ENSUAMG00000000759	TUT4	64	78.426	Ursus_americanus
ENSNBRG00000005683	-	95	62.382	ENSUMAG00000022669	TUT4	58	62.696	Ursus_maritimus
ENSNBRG00000005683	-	95	60.583	ENSVPAG00000000910	TUT4	53	60.923	Vicugna_pacos
ENSNBRG00000005683	-	100	63.581	ENSVVUG00000002703	TUT4	88	67.418	Vulpes_vulpes
ENSNBRG00000005683	-	99	62.443	ENSXETG00000008061	tut4	70	62.080	Xenopus_tropicalis
ENSNBRG00000005683	-	100	80.650	ENSXCOG00000007204	-	100	80.207	Xiphophorus_couchianus
ENSNBRG00000005683	-	100	80.945	ENSXMAG00000000751	-	100	80.502	Xiphophorus_maculatus