EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000005739 (Gene tree)
Gene ID: 102800242
Gene Symbol: rbm27
Alias: si:dkey-149g3.2
Full Name: RNA-binding protein 27-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 20792 bases
Position: chrJH422280.1:1939343-1960134
Accession: 102800242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007317	RRM_1	PF00076.22	1.7e-08	1	1
ENSNBRP00000007317	PWI	PF01480.17	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007522	-	5916	XM_006784955	ENSNBRP00000007317	1044 (aa)	XP_006785018	UPI0003EBF2F2

Gene Model

Click here to download ENSNBRG00000005739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000005739	rbm27	59	43.018	ENSNBRG00000018981	rbm26	72	40.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005739	rbm27	100	45.236	ENSG00000091009	RBM27	62	91.026	Homo_sapiens
ENSNBRG00000005739	rbm27	100	87.464	ENSAPOG00000000301	rbm27	100	87.559	Acanthochromis_polyacanthus
ENSNBRG00000005739	rbm27	100	45.345	ENSAMEG00000017593	-	64	74.312	Ailuropoda_melanoleuca
ENSNBRG00000005739	rbm27	56	43.824	ENSACIG00000000128	rbm26	71	41.911	Amphilophus_citrinellus
ENSNBRG00000005739	rbm27	96	84.623	ENSACIG00000014111	rbm27	100	82.609	Amphilophus_citrinellus
ENSNBRG00000005739	rbm27	100	87.002	ENSAOCG00000016767	rbm27	100	88.140	Amphiprion_ocellaris
ENSNBRG00000005739	rbm27	100	87.274	ENSAPEG00000017681	rbm27	100	88.319	Amphiprion_percula
ENSNBRG00000005739	rbm27	100	84.820	ENSATEG00000010385	rbm27	100	84.886	Anabas_testudineus
ENSNBRG00000005739	rbm27	59	42.925	ENSAPLG00000011536	RBM26	64	41.092	Anas_platyrhynchos
ENSNBRG00000005739	rbm27	86	50.736	ENSAPLG00000009309	-	62	71.591	Anas_platyrhynchos
ENSNBRG00000005739	rbm27	95	47.539	ENSACAG00000014177	-	66	74.074	Anolis_carolinensis
ENSNBRG00000005739	rbm27	100	46.625	ENSANAG00000034039	-	61	93.220	Aotus_nancymaae
ENSNBRG00000005739	rbm27	100	98.185	ENSACLG00000010782	rbm27	100	98.185	Astatotilapia_calliptera
ENSNBRG00000005739	rbm27	59	43.128	ENSACLG00000022597	rbm26	72	42.452	Astatotilapia_calliptera
ENSNBRG00000005739	rbm27	100	61.646	ENSAMXG00000029605	rbm27	100	64.015	Astyanax_mexicanus
ENSNBRG00000005739	rbm27	100	46.864	ENSBTAG00000011642	RBM27	64	47.490	Bos_taurus
ENSNBRG00000005739	rbm27	98	49.857	ENSCJAG00000021308	-	64	47.425	Callithrix_jacchus
ENSNBRG00000005739	rbm27	100	45.000	ENSCAFG00000006456	-	64	74.312	Canis_familiaris
ENSNBRG00000005739	rbm27	98	44.298	ENSCAFG00020024931	-	63	71.910	Canis_lupus_dingo
ENSNBRG00000005739	rbm27	59	44.320	ENSCAFG00020024152	RBM26	74	43.333	Canis_lupus_dingo
ENSNBRG00000005739	rbm27	100	45.690	ENSCHIG00000009045	-	55	50.000	Capra_hircus
ENSNBRG00000005739	rbm27	98	50.867	ENSTSYG00000004303	-	64	74.312	Carlito_syrichta
ENSNBRG00000005739	rbm27	80	46.920	ENSCPOG00000002498	-	61	48.148	Cavia_porcellus
ENSNBRG00000005739	rbm27	68	63.063	ENSCPOG00000021081	RBM26	89	79.012	Cavia_porcellus
ENSNBRG00000005739	rbm27	98	49.570	ENSCCAG00000015866	-	60	93.103	Cebus_capucinus
ENSNBRG00000005739	rbm27	100	45.267	ENSCATG00000035545	-	64	74.312	Cercocebus_atys
ENSNBRG00000005739	rbm27	100	46.188	ENSCLAG00000016106	-	64	74.312	Chinchilla_lanigera
ENSNBRG00000005739	rbm27	100	45.572	ENSCSAG00000012270	-	64	74.312	Chlorocebus_sabaeus
ENSNBRG00000005739	rbm27	79	91.026	ENSCHOG00000002831	-	64	75.962	Choloepus_hoffmanni
ENSNBRG00000005739	rbm27	55	56.197	ENSCPBG00000008390	-	77	52.232	Chrysemys_picta_bellii
ENSNBRG00000005739	rbm27	100	46.572	ENSCANG00000040932	-	57	50.233	Colobus_angolensis_palliatus
ENSNBRG00000005739	rbm27	100	42.009	ENSCGRG00001018200	Rbm27	60	49.689	Cricetulus_griseus_chok1gshd
ENSNBRG00000005739	rbm27	59	43.750	ENSCGRG00000006579	Rbm26	97	44.444	Cricetulus_griseus_crigri
ENSNBRG00000005739	rbm27	98	45.936	ENSCGRG00000006403	Rbm27	62	72.222	Cricetulus_griseus_crigri
ENSNBRG00000005739	rbm27	100	78.942	ENSCSEG00000014910	rbm27	100	78.565	Cynoglossus_semilaevis
ENSNBRG00000005739	rbm27	85	89.796	ENSCVAG00000014585	rbm27	93	86.239	Cyprinodon_variegatus
ENSNBRG00000005739	rbm27	56	42.954	ENSCVAG00000015295	rbm26	72	41.221	Cyprinodon_variegatus
ENSNBRG00000005739	rbm27	68	51.220	ENSDARG00000104130	rbm26	82	80.247	Danio_rerio
ENSNBRG00000005739	rbm27	65	67.103	ENSDARG00000060521	rbm27	100	65.431	Danio_rerio
ENSNBRG00000005739	rbm27	59	43.740	ENSDNOG00000004726	RBM26	75	41.141	Dasypus_novemcinctus
ENSNBRG00000005739	rbm27	98	49.708	ENSDNOG00000019753	-	64	74.074	Dasypus_novemcinctus
ENSNBRG00000005739	rbm27	98	50.725	ENSDORG00000013392	Rbm27	64	74.312	Dipodomys_ordii
ENSNBRG00000005739	rbm27	59	44.569	ENSDORG00000006232	Rbm26	75	42.892	Dipodomys_ordii
ENSNBRG00000005739	rbm27	53	56.627	FBgn0002044	swm	59	56.627	Drosophila_melanogaster
ENSNBRG00000005739	rbm27	55	45.257	ENSEBUG00000003376	rbm26	61	54.634	Eptatretus_burgeri
ENSNBRG00000005739	rbm27	98	46.974	ENSEASG00005020588	-	54	49.922	Equus_asinus_asinus
ENSNBRG00000005739	rbm27	98	50.862	ENSECAG00000000883	-	64	73.394	Equus_caballus
ENSNBRG00000005739	rbm27	100	44.377	ENSEEUG00000010335	-	64	69.725	Erinaceus_europaeus
ENSNBRG00000005739	rbm27	100	65.949	ENSELUG00000023148	rbm27	100	67.198	Esox_lucius
ENSNBRG00000005739	rbm27	87	54.478	ENSELUG00000003110	rbm26	81	68.817	Esox_lucius
ENSNBRG00000005739	rbm27	100	46.512	ENSFCAG00000005792	-	64	47.218	Felis_catus
ENSNBRG00000005739	rbm27	86	50.909	ENSFALG00000003228	-	63	70.213	Ficedula_albicollis
ENSNBRG00000005739	rbm27	98	50.725	ENSFDAG00000017029	-	64	73.394	Fukomys_damarensis
ENSNBRG00000005739	rbm27	59	43.790	ENSFDAG00000011365	RBM26	64	43.208	Fukomys_damarensis
ENSNBRG00000005739	rbm27	100	80.660	ENSFHEG00000010494	rbm27	100	81.604	Fundulus_heteroclitus
ENSNBRG00000005739	rbm27	61	41.489	ENSFHEG00000005102	rbm26	72	39.433	Fundulus_heteroclitus
ENSNBRG00000005739	rbm27	90	84.615	ENSGMOG00000013610	rbm27	88	80.172	Gadus_morhua
ENSNBRG00000005739	rbm27	54	55.517	ENSGALG00000007516	-	76	51.028	Gallus_gallus
ENSNBRG00000005739	rbm27	100	80.966	ENSGAFG00000005005	rbm27	100	81.061	Gambusia_affinis
ENSNBRG00000005739	rbm27	100	74.501	ENSGACG00000020719	rbm27	100	73.588	Gasterosteus_aculeatus
ENSNBRG00000005739	rbm27	95	48.675	ENSGAGG00000002126	-	76	49.637	Gopherus_agassizii
ENSNBRG00000005739	rbm27	100	45.150	ENSGGOG00000013312	-	62	91.026	Gorilla_gorilla
ENSNBRG00000005739	rbm27	59	43.128	ENSHBUG00000003761	rbm26	72	41.550	Haplochromis_burtoni
ENSNBRG00000005739	rbm27	100	98.375	ENSHBUG00000003077	rbm27	100	98.375	Haplochromis_burtoni
ENSNBRG00000005739	rbm27	98	50.435	ENSHGLG00000004076	RBM27	64	73.394	Heterocephalus_glaber_female
ENSNBRG00000005739	rbm27	96	48.308	ENSHGLG00100003022	-	59	70.787	Heterocephalus_glaber_male
ENSNBRG00000005739	rbm27	90	75.535	ENSHCOG00000003684	rbm27	100	73.175	Hippocampus_comes
ENSNBRG00000005739	rbm27	100	63.602	ENSIPUG00000012280	rbm27	100	65.090	Ictalurus_punctatus
ENSNBRG00000005739	rbm27	59	79.487	ENSIPUG00000004579	rbm26	61	79.487	Ictalurus_punctatus
ENSNBRG00000005739	rbm27	98	50.000	ENSSTOG00000002378	-	64	74.312	Ictidomys_tridecemlineatus
ENSNBRG00000005739	rbm27	100	41.899	ENSJJAG00000010911	Rbm27	63	93.333	Jaculus_jaculus
ENSNBRG00000005739	rbm27	59	43.930	ENSJJAG00000022458	Rbm26	63	43.208	Jaculus_jaculus
ENSNBRG00000005739	rbm27	100	82.453	ENSKMAG00000009801	rbm27	100	83.585	Kryptolebias_marmoratus
ENSNBRG00000005739	rbm27	54	43.351	ENSKMAG00000021802	rbm26	76	40.517	Kryptolebias_marmoratus
ENSNBRG00000005739	rbm27	100	83.697	ENSLBEG00000025151	rbm27	100	85.213	Labrus_bergylta
ENSNBRG00000005739	rbm27	95	47.886	ENSLACG00000008729	rbm27	86	84.783	Latimeria_chalumnae
ENSNBRG00000005739	rbm27	95	62.079	ENSLOCG00000010426	rbm27	99	63.084	Lepisosteus_oculatus
ENSNBRG00000005739	rbm27	59	43.740	ENSLAFG00000010689	RBM26	63	42.113	Loxodonta_africana
ENSNBRG00000005739	rbm27	98	48.851	ENSLAFG00000022447	-	65	74.312	Loxodonta_africana
ENSNBRG00000005739	rbm27	100	47.032	ENSMFAG00000042337	-	65	74.312	Macaca_fascicularis
ENSNBRG00000005739	rbm27	100	45.660	ENSMMUG00000004476	RBM27	64	74.312	Macaca_mulatta
ENSNBRG00000005739	rbm27	94	42.754	ENSMNEG00000037798	-	71	50.000	Macaca_nemestrina
ENSNBRG00000005739	rbm27	100	45.150	ENSMLEG00000032857	-	64	74.312	Mandrillus_leucophaeus
ENSNBRG00000005739	rbm27	95	80.099	ENSMAMG00000021382	rbm27	100	77.081	Mastacembelus_armatus
ENSNBRG00000005739	rbm27	100	98.281	ENSMZEG00005002635	rbm27	100	98.281	Maylandia_zebra
ENSNBRG00000005739	rbm27	59	43.128	ENSMZEG00005004751	rbm26	72	42.542	Maylandia_zebra
ENSNBRG00000005739	rbm27	64	78.333	ENSMGAG00000014927	RBM26	69	61.224	Meleagris_gallopavo
ENSNBRG00000005739	rbm27	84	51.748	ENSMGAG00000009467	-	96	54.167	Meleagris_gallopavo
ENSNBRG00000005739	rbm27	98	49.284	ENSMAUG00000007657	Rbm27	60	75.229	Mesocricetus_auratus
ENSNBRG00000005739	rbm27	100	46.041	ENSMICG00000003262	-	56	50.551	Microcebus_murinus
ENSNBRG00000005739	rbm27	100	47.043	ENSMOCG00000019479	Rbm27	64	47.211	Microtus_ochrogaster
ENSNBRG00000005739	rbm27	100	73.957	ENSMMOG00000013809	rbm27	100	72.325	Mola_mola
ENSNBRG00000005739	rbm27	90	52.477	ENSMODG00000010182	-	66	72.727	Monodelphis_domestica
ENSNBRG00000005739	rbm27	100	77.735	ENSMALG00000018514	rbm27	100	75.382	Monopterus_albus
ENSNBRG00000005739	rbm27	54	43.501	ENSMALG00000015030	rbm26	74	40.794	Monopterus_albus
ENSNBRG00000005739	rbm27	98	49.855	MGP_CAROLIEiJ_G0022226	Rbm27	60	74.312	Mus_caroli
ENSNBRG00000005739	rbm27	100	46.953	ENSMUSG00000024491	Rbm27	60	74.312	Mus_musculus
ENSNBRG00000005739	rbm27	98	49.288	MGP_PahariEiJ_G0018959	Rbm27	60	74.312	Mus_pahari
ENSNBRG00000005739	rbm27	98	49.288	MGP_SPRETEiJ_G0023136	Rbm27	60	74.312	Mus_spretus
ENSNBRG00000005739	rbm27	100	45.250	ENSMPUG00000007832	-	64	74.312	Mustela_putorius_furo
ENSNBRG00000005739	rbm27	98	49.573	ENSMLUG00000000643	-	64	74.312	Myotis_lucifugus
ENSNBRG00000005739	rbm27	98	50.712	ENSNGAG00000016316	Rbm27	64	74.312	Nannospalax_galili
ENSNBRG00000005739	rbm27	100	45.408	ENSNLEG00000009886	-	64	74.312	Nomascus_leucogenys
ENSNBRG00000005739	rbm27	64	50.758	ENSMEUG00000004031	-	50	89.610	Notamacropus_eugenii
ENSNBRG00000005739	rbm27	84	51.092	ENSOPRG00000005424	-	66	51.320	Ochotona_princeps
ENSNBRG00000005739	rbm27	95	45.372	ENSODEG00000005515	-	68	60.131	Octodon_degus
ENSNBRG00000005739	rbm27	100	96.388	ENSONIG00000008506	rbm27	100	96.388	Oreochromis_niloticus
ENSNBRG00000005739	rbm27	59	44.618	ENSONIG00000003242	rbm26	55	44.444	Oreochromis_niloticus
ENSNBRG00000005739	rbm27	64	41.040	ENSOANG00000001531	RBM26	75	41.667	Ornithorhynchus_anatinus
ENSNBRG00000005739	rbm27	100	45.960	ENSOCUG00000000186	-	54	50.392	Oryctolagus_cuniculus
ENSNBRG00000005739	rbm27	57	43.615	ENSORLG00000004434	rbm26	73	40.777	Oryzias_latipes
ENSNBRG00000005739	rbm27	100	79.052	ENSORLG00000001645	rbm27	100	85.294	Oryzias_latipes
ENSNBRG00000005739	rbm27	100	79.640	ENSORLG00020019863	rbm27	100	79.640	Oryzias_latipes_hni
ENSNBRG00000005739	rbm27	100	79.336	ENSORLG00015003753	rbm27	100	85.294	Oryzias_latipes_hsok
ENSNBRG00000005739	rbm27	100	78.639	ENSOMEG00000005785	rbm27	100	83.333	Oryzias_melastigma
ENSNBRG00000005739	rbm27	100	46.048	ENSOGAG00000008758	-	54	50.619	Otolemur_garnettii
ENSNBRG00000005739	rbm27	54	45.804	ENSOGAG00000009171	RBM26	63	42.363	Otolemur_garnettii
ENSNBRG00000005739	rbm27	100	46.329	ENSOARG00000002840	-	65	74.312	Ovis_aries
ENSNBRG00000005739	rbm27	100	46.365	ENSPPAG00000039646	-	62	91.026	Pan_paniscus
ENSNBRG00000005739	rbm27	100	45.549	ENSPPRG00000021227	-	55	49.845	Panthera_pardus
ENSNBRG00000005739	rbm27	100	45.549	ENSPTIG00000013051	-	55	49.845	Panthera_tigris_altaica
ENSNBRG00000005739	rbm27	100	46.365	ENSPTRG00000017373	-	62	91.026	Pan_troglodytes
ENSNBRG00000005739	rbm27	98	45.035	ENSPANG00000015776	-	63	71.910	Papio_anubis
ENSNBRG00000005739	rbm27	100	45.198	ENSPKIG00000024548	-	80	82.051	Paramormyrops_kingsleyae
ENSNBRG00000005739	rbm27	64	61.699	ENSPKIG00000006776	-	100	61.443	Paramormyrops_kingsleyae
ENSNBRG00000005739	rbm27	55	55.405	ENSPSIG00000016084	-	77	50.786	Pelodiscus_sinensis
ENSNBRG00000005739	rbm27	59	42.654	ENSPSIG00000007431	RBM26	63	40.056	Pelodiscus_sinensis
ENSNBRG00000005739	rbm27	57	76.254	ENSPMGG00000019541	rbm27	97	72.143	Periophthalmus_magnuspinnatus
ENSNBRG00000005739	rbm27	98	49.003	ENSPEMG00000014312	Rbm27	63	74.312	Peromyscus_maniculatus_bairdii
ENSNBRG00000005739	rbm27	93	44.132	ENSPCIG00000025797	-	67	71.910	Phascolarctos_cinereus
ENSNBRG00000005739	rbm27	100	80.664	ENSPFOG00000003105	rbm27	100	80.853	Poecilia_formosa
ENSNBRG00000005739	rbm27	67	55.469	ENSPLAG00000022377	rbm26	82	75.309	Poecilia_latipinna
ENSNBRG00000005739	rbm27	100	80.645	ENSPLAG00000000373	rbm27	100	80.361	Poecilia_latipinna
ENSNBRG00000005739	rbm27	100	80.664	ENSPMEG00000018569	rbm27	100	80.853	Poecilia_mexicana
ENSNBRG00000005739	rbm27	82	59.322	ENSPREG00000021003	rbm26	74	41.388	Poecilia_reticulata
ENSNBRG00000005739	rbm27	81	80.536	ENSPREG00000005827	rbm27	97	80.186	Poecilia_reticulata
ENSNBRG00000005739	rbm27	100	45.322	ENSPPYG00000015909	-	62	91.026	Pongo_abelii
ENSNBRG00000005739	rbm27	59	44.249	ENSPCOG00000017206	RBM26	60	42.365	Propithecus_coquereli
ENSNBRG00000005739	rbm27	100	44.987	ENSPVAG00000005218	-	63	74.312	Pteropus_vampyrus
ENSNBRG00000005739	rbm27	100	98.278	ENSPNYG00000015348	rbm27	100	98.278	Pundamilia_nyererei
ENSNBRG00000005739	rbm27	100	46.220	ENSRNOG00000027250	Rbm27	64	74.312	Rattus_norvegicus
ENSNBRG00000005739	rbm27	80	50.145	ENSRBIG00000036925	-	56	74.312	Rhinopithecus_bieti
ENSNBRG00000005739	rbm27	98	50.145	ENSRROG00000043836	-	64	74.312	Rhinopithecus_roxellana
ENSNBRG00000005739	rbm27	98	49.284	ENSSBOG00000034172	-	60	93.103	Saimiri_boliviensis_boliviensis
ENSNBRG00000005739	rbm27	90	43.391	ENSSBOG00000031813	RBM26	82	79.012	Saimiri_boliviensis_boliviensis
ENSNBRG00000005739	rbm27	80	49.614	ENSSHAG00000006988	-	68	50.633	Sarcophilus_harrisii
ENSNBRG00000005739	rbm27	73	42.085	ENSSFOG00015005311	rbm26	76	42.278	Scleropages_formosus
ENSNBRG00000005739	rbm27	95	59.642	ENSSFOG00015018009	rbm27	81	58.314	Scleropages_formosus
ENSNBRG00000005739	rbm27	100	77.589	ENSSMAG00000004138	rbm27	100	74.766	Scophthalmus_maximus
ENSNBRG00000005739	rbm27	100	87.063	ENSSDUG00000021085	rbm27	100	87.158	Seriola_dumerili
ENSNBRG00000005739	rbm27	100	88.258	ENSSLDG00000006922	rbm27	100	88.731	Seriola_lalandi_dorsalis
ENSNBRG00000005739	rbm27	66	45.204	ENSSARG00000000313	-	63	66.292	Sorex_araneus
ENSNBRG00000005739	rbm27	95	44.510	ENSSPUG00000013753	-	84	61.644	Sphenodon_punctatus
ENSNBRG00000005739	rbm27	96	80.276	ENSSPAG00000012000	rbm27	100	80.152	Stegastes_partitus
ENSNBRG00000005739	rbm27	57	42.998	ENSSPAG00000004632	rbm26	54	43.857	Stegastes_partitus
ENSNBRG00000005739	rbm27	83	50.515	ENSTGUG00000000085	-	86	74.074	Taeniopygia_guttata
ENSNBRG00000005739	rbm27	100	76.762	ENSTRUG00000004518	rbm27	100	77.333	Takifugu_rubripes
ENSNBRG00000005739	rbm27	89	42.623	ENSTRUG00000017189	rbm26	58	76.923	Takifugu_rubripes
ENSNBRG00000005739	rbm27	100	66.211	ENSTNIG00000018215	rbm27	78	68.793	Tetraodon_nigroviridis
ENSNBRG00000005739	rbm27	100	45.226	ENSTTRG00000016713	-	54	49.456	Tursiops_truncatus
ENSNBRG00000005739	rbm27	95	43.442	ENSUMAG00000010569	-	60	49.617	Ursus_maritimus
ENSNBRG00000005739	rbm27	59	44.246	ENSUMAG00000013370	RBM26	62	42.167	Ursus_maritimus
ENSNBRG00000005739	rbm27	77	64.444	ENSVPAG00000000558	-	69	74.312	Vicugna_pacos
ENSNBRG00000005739	rbm27	100	45.989	ENSVVUG00000021131	-	64	74.312	Vulpes_vulpes
ENSNBRG00000005739	rbm27	95	47.706	ENSXETG00000002322	rbm27	75	49.002	Xenopus_tropicalis
ENSNBRG00000005739	rbm27	57	42.971	ENSXETG00000017810	rbm26	96	42.349	Xenopus_tropicalis
ENSNBRG00000005739	rbm27	88	76.608	ENSXCOG00000005859	rbm27	72	83.636	Xiphophorus_couchianus
ENSNBRG00000005739	rbm27	85	59.322	ENSXCOG00000001827	rbm26	89	75.309	Xiphophorus_couchianus
ENSNBRG00000005739	rbm27	100	81.741	ENSXMAG00000001413	rbm27	100	81.268	Xiphophorus_maculatus