EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000005764 (Gene tree)
Gene ID: 102775971
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucine--tRNA ligase%2C cytoplasmic-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 21223 bases
Position: chrJH422280.1:1960402-1981624
Accession: 102775971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007504	tRNA-synt_1g	PF09334.11	2.6e-17	1	2
ENSNBRP00000007504	tRNA-synt_1g	PF09334.11	2.6e-17	2	2
ENSNBRP00000007469	tRNA-synt_1g	PF09334.11	2.6e-17	1	2
ENSNBRP00000007469	tRNA-synt_1g	PF09334.11	2.6e-17	2	2
ENSNBRP00000007504	Anticodon_1	PF08264.13	4.6e-15	1	1
ENSNBRP00000007469	Anticodon_1	PF08264.13	4.6e-15	1	1
ENSNBRP00000007504	tRNA-synt_1	PF00133.22	4.2e-38	1	2
ENSNBRP00000007504	tRNA-synt_1	PF00133.22	4.2e-38	2	2
ENSNBRP00000007469	tRNA-synt_1	PF00133.22	7.7e-38	1	2
ENSNBRP00000007469	tRNA-synt_1	PF00133.22	7.7e-38	2	2
ENSNBRP00000007504	tRNA-synt_1e	PF01406.19	3.3e-06	1	1
ENSNBRP00000007469	tRNA-synt_1e	PF01406.19	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007715	-	3534	-	ENSNBRP00000007504	1177 (aa)	-	-
ENSNBRT00000007678	-	4434	XM_006784957	ENSNBRP00000007469	1184 (aa)	XP_006785020	UPI0003EC638B

Gene Model

Click here to download ENSNBRG00000005764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005764	larsb	100	78.801	ENSG00000133706	LARS	100	79.539	Homo_sapiens
ENSNBRG00000005764	larsb	100	93.592	ENSAPOG00000010585	larsb	100	94.107	Acanthochromis_polyacanthus
ENSNBRG00000005764	larsb	99	78.716	ENSAMEG00000017584	LARS	100	78.716	Ailuropoda_melanoleuca
ENSNBRG00000005764	larsb	100	93.761	ENSACIG00000014026	larsb	100	93.761	Amphilophus_citrinellus
ENSNBRG00000005764	larsb	100	94.426	ENSAOCG00000016931	larsb	100	94.426	Amphiprion_ocellaris
ENSNBRG00000005764	larsb	100	94.510	ENSAPEG00000017720	larsb	100	94.510	Amphiprion_percula
ENSNBRG00000005764	larsb	100	88.786	ENSATEG00000010441	larsb	99	89.191	Anabas_testudineus
ENSNBRG00000005764	larsb	97	79.262	ENSAPLG00000008145	LARS	100	79.438	Anas_platyrhynchos
ENSNBRG00000005764	larsb	100	77.956	ENSACAG00000013916	LARS	100	78.041	Anolis_carolinensis
ENSNBRG00000005764	larsb	100	70.524	ENSANAG00000014375	LARS	100	70.524	Aotus_nancymaae
ENSNBRG00000005764	larsb	100	98.986	ENSACLG00000010881	larsb	100	98.986	Astatotilapia_calliptera
ENSNBRG00000005764	larsb	100	86.751	ENSAMXG00000019979	larsb	100	86.751	Astyanax_mexicanus
ENSNBRG00000005764	larsb	100	77.703	ENSBTAG00000006765	LARS	100	77.703	Bos_taurus
ENSNBRG00000005764	larsb	99	55.565	WBGene00003073	lars-1	99	55.461	Caenorhabditis_elegans
ENSNBRG00000005764	larsb	100	78.885	ENSCJAG00000021314	LARS	100	79.539	Callithrix_jacchus
ENSNBRG00000005764	larsb	100	79.054	ENSCAFG00000006431	LARS	100	79.054	Canis_familiaris
ENSNBRG00000005764	larsb	99	79.103	ENSCAFG00020025009	LARS	99	79.103	Canis_lupus_dingo
ENSNBRG00000005764	larsb	100	77.956	ENSCHIG00000014949	LARS	100	77.956	Capra_hircus
ENSNBRG00000005764	larsb	100	77.956	ENSTSYG00000001253	LARS	100	77.956	Carlito_syrichta
ENSNBRG00000005764	larsb	96	62.138	ENSCAPG00000015676	LARS	97	62.314	Cavia_aperea
ENSNBRG00000005764	larsb	100	76.943	ENSCPOG00000012329	LARS	100	76.943	Cavia_porcellus
ENSNBRG00000005764	larsb	100	79.139	ENSCCAG00000020789	LARS	100	79.139	Cebus_capucinus
ENSNBRG00000005764	larsb	97	79.025	ENSCATG00000033463	LARS	100	79.362	Cercocebus_atys
ENSNBRG00000005764	larsb	100	77.534	ENSCLAG00000011193	LARS	100	77.534	Chinchilla_lanigera
ENSNBRG00000005764	larsb	99	78.736	ENSCSAG00000012280	LARS	97	78.736	Chlorocebus_sabaeus
ENSNBRG00000005764	larsb	90	72.067	ENSCHOG00000009309	LARS	90	72.067	Choloepus_hoffmanni
ENSNBRG00000005764	larsb	99	80.135	ENSCPBG00000008415	LARS	99	81.345	Chrysemys_picta_bellii
ENSNBRG00000005764	larsb	98	65.082	ENSCING00000008535	-	98	64.391	Ciona_intestinalis
ENSNBRG00000005764	larsb	99	63.675	ENSCSAVG00000009040	-	100	68.399	Ciona_savignyi
ENSNBRG00000005764	larsb	100	78.885	ENSCANG00000031137	LARS	100	78.885	Colobus_angolensis_palliatus
ENSNBRG00000005764	larsb	93	73.612	ENSCGRG00001004647	Lars	99	73.612	Cricetulus_griseus_chok1gshd
ENSNBRG00000005764	larsb	100	75.359	ENSCGRG00000007284	Lars	100	75.359	Cricetulus_griseus_crigri
ENSNBRG00000005764	larsb	100	91.821	ENSCSEG00000014984	larsb	100	91.821	Cynoglossus_semilaevis
ENSNBRG00000005764	larsb	100	93.497	ENSCVAG00000014685	larsb	100	93.497	Cyprinodon_variegatus
ENSNBRG00000005764	larsb	68	87.359	ENSDARG00000019280	larsb	100	87.359	Danio_rerio
ENSNBRG00000005764	larsb	97	77.826	ENSDNOG00000017963	LARS	100	78.360	Dasypus_novemcinctus
ENSNBRG00000005764	larsb	100	73.272	ENSDORG00000014913	Lars	100	73.272	Dipodomys_ordii
ENSNBRG00000005764	larsb	99	58.883	FBgn0284253	LeuRS	99	59.306	Drosophila_melanogaster
ENSNBRG00000005764	larsb	94	63.555	ENSETEG00000003145	LARS	100	63.555	Echinops_telfairi
ENSNBRG00000005764	larsb	92	60.350	ENSEBUG00000014985	larsb	97	60.350	Eptatretus_burgeri
ENSNBRG00000005764	larsb	100	78.632	ENSEASG00005020569	LARS	100	78.880	Equus_asinus_asinus
ENSNBRG00000005764	larsb	100	78.547	ENSECAG00000008963	LARS	100	79.362	Equus_caballus
ENSNBRG00000005764	larsb	92	63.309	ENSEEUG00000014854	LARS	92	63.309	Erinaceus_europaeus
ENSNBRG00000005764	larsb	100	86.318	ENSELUG00000023311	larsb	100	86.318	Esox_lucius
ENSNBRG00000005764	larsb	99	78.765	ENSFCAG00000008715	LARS	100	80.075	Felis_catus
ENSNBRG00000005764	larsb	100	79.241	ENSFALG00000003209	LARS	93	79.241	Ficedula_albicollis
ENSNBRG00000005764	larsb	100	77.196	ENSFDAG00000020764	LARS	100	77.111	Fukomys_damarensis
ENSNBRG00000005764	larsb	91	92.318	ENSFHEG00000010437	larsb	100	92.318	Fundulus_heteroclitus
ENSNBRG00000005764	larsb	99	87.394	ENSGMOG00000013645	larsb	99	87.394	Gadus_morhua
ENSNBRG00000005764	larsb	100	79.848	ENSGALG00000007494	LARS	100	79.848	Gallus_gallus
ENSNBRG00000005764	larsb	100	92.821	ENSGAFG00000005029	larsb	100	92.821	Gambusia_affinis
ENSNBRG00000005764	larsb	99	90.614	ENSGACG00000020720	larsb	99	90.614	Gasterosteus_aculeatus
ENSNBRG00000005764	larsb	99	79.290	ENSGAGG00000002353	LARS	99	79.290	Gopherus_agassizii
ENSNBRG00000005764	larsb	100	78.716	ENSGGOG00000004103	LARS	100	78.716	Gorilla_gorilla
ENSNBRG00000005764	larsb	100	97.366	ENSHBUG00000003051	larsb	100	98.820	Haplochromis_burtoni
ENSNBRG00000005764	larsb	100	77.618	ENSHGLG00000006937	LARS	100	77.618	Heterocephalus_glaber_female
ENSNBRG00000005764	larsb	100	77.618	ENSHGLG00100002801	LARS	100	77.618	Heterocephalus_glaber_male
ENSNBRG00000005764	larsb	99	90.955	ENSHCOG00000003651	larsb	100	90.955	Hippocampus_comes
ENSNBRG00000005764	larsb	99	85.678	ENSIPUG00000010756	lars	100	85.837	Ictalurus_punctatus
ENSNBRG00000005764	larsb	100	78.209	ENSSTOG00000002356	LARS	100	78.209	Ictidomys_tridecemlineatus
ENSNBRG00000005764	larsb	100	76.943	ENSJJAG00000015265	Lars	100	76.943	Jaculus_jaculus
ENSNBRG00000005764	larsb	100	93.671	ENSKMAG00000009903	larsb	100	93.755	Kryptolebias_marmoratus
ENSNBRG00000005764	larsb	100	92.911	ENSLBEG00000025237	larsb	100	92.911	Labrus_bergylta
ENSNBRG00000005764	larsb	100	79.040	ENSLACG00000009321	LARS	100	79.461	Latimeria_chalumnae
ENSNBRG00000005764	larsb	99	83.532	ENSLOCG00000010442	larsb	100	83.178	Lepisosteus_oculatus
ENSNBRG00000005764	larsb	99	78.209	ENSLAFG00000000318	LARS	100	78.173	Loxodonta_africana
ENSNBRG00000005764	larsb	100	78.801	ENSMFAG00000038685	LARS	100	78.801	Macaca_fascicularis
ENSNBRG00000005764	larsb	100	78.801	ENSMMUG00000029787	LARS	100	78.801	Macaca_mulatta
ENSNBRG00000005764	larsb	99	76.988	ENSMNEG00000044014	LARS	99	76.988	Macaca_nemestrina
ENSNBRG00000005764	larsb	99	78.849	ENSMLEG00000037563	LARS	99	78.849	Mandrillus_leucophaeus
ENSNBRG00000005764	larsb	100	94.172	ENSMAMG00000021385	larsb	100	94.172	Mastacembelus_armatus
ENSNBRG00000005764	larsb	100	98.902	ENSMZEG00005002662	larsb	100	98.902	Maylandia_zebra
ENSNBRG00000005764	larsb	97	80.580	ENSMGAG00000009388	LARS	100	80.580	Meleagris_gallopavo
ENSNBRG00000005764	larsb	99	68.190	ENSMAUG00000003063	Lars	99	67.766	Mesocricetus_auratus
ENSNBRG00000005764	larsb	100	78.801	ENSMICG00000035589	-	100	78.801	Microcebus_murinus
ENSNBRG00000005764	larsb	100	65.203	ENSMICG00000035435	-	100	65.203	Microcebus_murinus
ENSNBRG00000005764	larsb	100	77.046	ENSMOCG00000002092	Lars	100	77.046	Microtus_ochrogaster
ENSNBRG00000005764	larsb	100	89.169	ENSMMOG00000013802	larsb	100	89.169	Mola_mola
ENSNBRG00000005764	larsb	99	72.727	ENSMODG00000010231	LARS	99	72.727	Monodelphis_domestica
ENSNBRG00000005764	larsb	99	90.508	ENSMALG00000018444	larsb	99	90.508	Monopterus_albus
ENSNBRG00000005764	larsb	100	77.300	MGP_CAROLIEiJ_G0022225	Lars	100	77.300	Mus_caroli
ENSNBRG00000005764	larsb	100	76.962	ENSMUSG00000024493	Lars	100	76.962	Mus_musculus
ENSNBRG00000005764	larsb	100	77.131	MGP_PahariEiJ_G0018958	Lars	100	77.131	Mus_pahari
ENSNBRG00000005764	larsb	100	77.300	MGP_SPRETEiJ_G0023135	Lars	100	77.300	Mus_spretus
ENSNBRG00000005764	larsb	100	78.801	ENSMPUG00000007844	LARS	100	78.801	Mustela_putorius_furo
ENSNBRG00000005764	larsb	99	77.853	ENSMLUG00000001125	LARS	100	77.853	Myotis_lucifugus
ENSNBRG00000005764	larsb	100	76.605	ENSNGAG00000011596	Lars	100	76.605	Nannospalax_galili
ENSNBRG00000005764	larsb	99	78.426	ENSNLEG00000009816	LARS	99	78.426	Nomascus_leucogenys
ENSNBRG00000005764	larsb	53	81.982	ENSMEUG00000002332	-	60	75.610	Notamacropus_eugenii
ENSNBRG00000005764	larsb	78	82.258	ENSOPRG00000003076	LARS	83	82.258	Ochotona_princeps
ENSNBRG00000005764	larsb	99	75.381	ENSODEG00000004882	LARS	100	75.381	Octodon_degus
ENSNBRG00000005764	larsb	100	98.649	ENSONIG00000008493	larsb	100	98.649	Oreochromis_niloticus
ENSNBRG00000005764	larsb	100	76.114	ENSOANG00000005755	LARS	100	76.114	Ornithorhynchus_anatinus
ENSNBRG00000005764	larsb	100	78.378	ENSOCUG00000015684	LARS	100	78.378	Oryctolagus_cuniculus
ENSNBRG00000005764	larsb	100	92.736	ENSORLG00000001622	larsb	100	92.736	Oryzias_latipes
ENSNBRG00000005764	larsb	100	92.736	ENSORLG00020019950	larsb	100	92.736	Oryzias_latipes_hni
ENSNBRG00000005764	larsb	100	92.905	ENSORLG00015003895	larsb	100	92.905	Oryzias_latipes_hsok
ENSNBRG00000005764	larsb	100	92.821	ENSOMEG00000005677	larsb	100	92.821	Oryzias_melastigma
ENSNBRG00000005764	larsb	97	76.681	ENSOGAG00000008750	LARS	100	76.696	Otolemur_garnettii
ENSNBRG00000005764	larsb	100	77.703	ENSOARG00000015911	-	99	77.703	Ovis_aries
ENSNBRG00000005764	larsb	99	77.768	ENSOARG00000002454	-	100	77.768	Ovis_aries
ENSNBRG00000005764	larsb	99	78.765	ENSPPAG00000027964	LARS	99	78.765	Pan_paniscus
ENSNBRG00000005764	larsb	100	78.885	ENSPPRG00000023492	LARS	100	78.885	Panthera_pardus
ENSNBRG00000005764	larsb	100	78.801	ENSPTIG00000013110	LARS	100	78.801	Panthera_tigris_altaica
ENSNBRG00000005764	larsb	100	78.632	ENSPTRG00000017372	LARS	100	78.632	Pan_troglodytes
ENSNBRG00000005764	larsb	100	78.801	ENSPANG00000002663	LARS	100	78.801	Papio_anubis
ENSNBRG00000005764	larsb	98	84.542	ENSPKIG00000006650	larsb	99	82.188	Paramormyrops_kingsleyae
ENSNBRG00000005764	larsb	99	79.713	ENSPSIG00000015641	LARS	100	79.713	Pelodiscus_sinensis
ENSNBRG00000005764	larsb	68	93.625	ENSPMGG00000019556	LARS	100	93.625	Periophthalmus_magnuspinnatus
ENSNBRG00000005764	larsb	100	73.586	ENSPEMG00000010933	Lars	100	73.586	Peromyscus_maniculatus_bairdii
ENSNBRG00000005764	larsb	51	61.028	ENSPMAG00000005301	larsb	99	61.028	Petromyzon_marinus
ENSNBRG00000005764	larsb	100	77.027	ENSPCIG00000030572	LARS	100	77.027	Phascolarctos_cinereus
ENSNBRG00000005764	larsb	100	93.412	ENSPFOG00000002361	larsb	100	93.412	Poecilia_formosa
ENSNBRG00000005764	larsb	100	93.412	ENSPLAG00000016550	larsb	100	93.412	Poecilia_latipinna
ENSNBRG00000005764	larsb	100	93.243	ENSPMEG00000018422	larsb	100	93.243	Poecilia_mexicana
ENSNBRG00000005764	larsb	100	93.159	ENSPREG00000005668	larsb	100	93.159	Poecilia_reticulata
ENSNBRG00000005764	larsb	99	76.988	ENSPPYG00000015908	LARS	97	76.988	Pongo_abelii
ENSNBRG00000005764	larsb	89	68.750	ENSPCAG00000005621	LARS	96	65.388	Procavia_capensis
ENSNBRG00000005764	larsb	100	77.449	ENSPCOG00000019325	LARS	100	77.449	Propithecus_coquereli
ENSNBRG00000005764	larsb	97	70.035	ENSPVAG00000011237	LARS	100	70.429	Pteropus_vampyrus
ENSNBRG00000005764	larsb	100	98.733	ENSPNYG00000015254	larsb	100	98.733	Pundamilia_nyererei
ENSNBRG00000005764	larsb	100	85.135	ENSPNAG00000027191	larsb	100	85.135	Pygocentrus_nattereri
ENSNBRG00000005764	larsb	100	76.793	ENSRNOG00000018304	Lars	100	76.793	Rattus_norvegicus
ENSNBRG00000005764	larsb	94	77.648	ENSRBIG00000043198	LARS	99	77.648	Rhinopithecus_bieti
ENSNBRG00000005764	larsb	90	45.792	YPL160W	CDC60	99	46.007	Saccharomyces_cerevisiae
ENSNBRG00000005764	larsb	99	76.481	ENSSBOG00000026661	LARS	100	79.317	Saimiri_boliviensis_boliviensis
ENSNBRG00000005764	larsb	100	78.312	ENSSHAG00000006084	LARS	100	78.312	Sarcophilus_harrisii
ENSNBRG00000005764	larsb	97	84.790	ENSSFOG00015018117	larsb	90	84.819	Scleropages_formosus
ENSNBRG00000005764	larsb	88	94.056	ENSSMAG00000004078	larsb	97	94.247	Scophthalmus_maximus
ENSNBRG00000005764	larsb	100	94.426	ENSSDUG00000021142	larsb	100	94.426	Seriola_dumerili
ENSNBRG00000005764	larsb	100	94.595	ENSSLDG00000007054	larsb	100	94.595	Seriola_lalandi_dorsalis
ENSNBRG00000005764	larsb	85	72.143	ENSSARG00000013481	LARS	85	71.111	Sorex_araneus
ENSNBRG00000005764	larsb	100	79.005	ENSSPUG00000013805	LARS	100	79.258	Sphenodon_punctatus
ENSNBRG00000005764	larsb	100	94.426	ENSSPAG00000012124	larsb	100	94.426	Stegastes_partitus
ENSNBRG00000005764	larsb	100	75.422	ENSSSCG00000014411	LARS	100	75.422	Sus_scrofa
ENSNBRG00000005764	larsb	99	79.216	ENSTGUG00000000092	-	99	79.216	Taeniopygia_guttata
ENSNBRG00000005764	larsb	100	89.611	ENSTRUG00000005358	larsb	100	89.611	Takifugu_rubripes
ENSNBRG00000005764	larsb	99	85.896	ENSTNIG00000018214	larsb	100	85.919	Tetraodon_nigroviridis
ENSNBRG00000005764	larsb	91	75.889	ENSTBEG00000003757	LARS	94	75.889	Tupaia_belangeri
ENSNBRG00000005764	larsb	97	75.968	ENSTTRG00000016712	LARS	96	75.986	Tursiops_truncatus
ENSNBRG00000005764	larsb	94	79.749	ENSUAMG00000019907	LARS	99	79.749	Ursus_americanus
ENSNBRG00000005764	larsb	100	78.801	ENSUMAG00000010585	LARS	100	78.801	Ursus_maritimus
ENSNBRG00000005764	larsb	92	78.691	ENSVPAG00000000557	LARS	92	78.691	Vicugna_pacos
ENSNBRG00000005764	larsb	100	79.054	ENSVVUG00000021124	LARS	100	79.054	Vulpes_vulpes
ENSNBRG00000005764	larsb	99	80.338	ENSXETG00000002320	lars	99	80.338	Xenopus_tropicalis
ENSNBRG00000005764	larsb	100	92.905	ENSXMAG00000001454	larsb	100	92.905	Xiphophorus_maculatus