EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000005991 (Gene tree)
Gene ID: 102777836
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex subunit 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9862 bases
Position: chrJH422296.1:236331-246192
Accession: 102777836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007991	efThoc1	PF11957.8	4.9e-144	1	1
ENSNBRP00000007912	efThoc1	PF11957.8	4.5e-125	1	2
ENSNBRP00000007912	efThoc1	PF11957.8	4.5e-125	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008214	-	1947	XM_006792100	ENSNBRP00000007991	648 (aa)	XP_006792163	-
ENSNBRT00000008134	-	1887	-	ENSNBRP00000007912	628 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000005991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005991	thoc1	98	72.613	ENSG00000079134	THOC1	99	77.941	Homo_sapiens
ENSNBRG00000005991	thoc1	98	72.926	ENSAMEG00000006645	THOC1	97	72.926	Ailuropoda_melanoleuca
ENSNBRG00000005991	thoc1	94	94.893	ENSACIG00000019392	thoc1	95	94.893	Amphilophus_citrinellus
ENSNBRG00000005991	thoc1	97	87.579	ENSAOCG00000008391	thoc1	97	87.579	Amphiprion_ocellaris
ENSNBRG00000005991	thoc1	97	92.947	ENSAPEG00000001093	thoc1	98	92.947	Amphiprion_percula
ENSNBRG00000005991	thoc1	97	91.536	ENSATEG00000004783	thoc1	98	91.536	Anabas_testudineus
ENSNBRG00000005991	thoc1	98	72.500	ENSAPLG00000016149	THOC1	96	72.500	Anas_platyrhynchos
ENSNBRG00000005991	thoc1	97	73.386	ENSACAG00000008307	THOC1	94	72.756	Anolis_carolinensis
ENSNBRG00000005991	thoc1	98	71.981	ENSANAG00000033200	THOC1	97	71.981	Aotus_nancymaae
ENSNBRG00000005991	thoc1	97	96.238	ENSACLG00000016836	thoc1	98	96.238	Astatotilapia_calliptera
ENSNBRG00000005991	thoc1	94	78.100	ENSAMXG00000014708	thoc1	98	77.419	Astyanax_mexicanus
ENSNBRG00000005991	thoc1	98	72.926	ENSBTAG00000019215	THOC1	97	72.926	Bos_taurus
ENSNBRG00000005991	thoc1	66	37.330	WBGene00020172	thoc-1	65	37.054	Caenorhabditis_elegans
ENSNBRG00000005991	thoc1	97	73.186	ENSCJAG00000020450	THOC1	96	73.186	Callithrix_jacchus
ENSNBRG00000005991	thoc1	98	72.770	ENSCAFG00000018324	THOC1	97	72.770	Canis_familiaris
ENSNBRG00000005991	thoc1	98	72.770	ENSCAFG00020017894	THOC1	97	72.770	Canis_lupus_dingo
ENSNBRG00000005991	thoc1	98	72.926	ENSCHIG00000015399	THOC1	98	73.344	Capra_hircus
ENSNBRG00000005991	thoc1	98	72.613	ENSTSYG00000010585	THOC1	96	72.613	Carlito_syrichta
ENSNBRG00000005991	thoc1	97	51.811	ENSCAPG00000016270	THOC1	97	51.491	Cavia_aperea
ENSNBRG00000005991	thoc1	97	72.397	ENSCPOG00000000959	THOC1	96	72.397	Cavia_porcellus
ENSNBRG00000005991	thoc1	98	72.770	ENSCCAG00000025766	THOC1	97	72.770	Cebus_capucinus
ENSNBRG00000005991	thoc1	98	70.579	ENSCATG00000028180	THOC1	96	76.522	Cercocebus_atys
ENSNBRG00000005991	thoc1	97	73.028	ENSCLAG00000009117	THOC1	99	73.028	Chinchilla_lanigera
ENSNBRG00000005991	thoc1	98	72.770	ENSCSAG00000017631	THOC1	97	72.770	Chlorocebus_sabaeus
ENSNBRG00000005991	thoc1	82	77.593	ENSCHOG00000010609	THOC1	78	77.593	Choloepus_hoffmanni
ENSNBRG00000005991	thoc1	97	73.659	ENSCPBG00000027558	THOC1	96	73.659	Chrysemys_picta_bellii
ENSNBRG00000005991	thoc1	69	49.251	ENSCING00000007663	-	93	48.608	Ciona_intestinalis
ENSNBRG00000005991	thoc1	94	47.874	ENSCSAVG00000010649	-	100	47.627	Ciona_savignyi
ENSNBRG00000005991	thoc1	98	72.613	ENSCANG00000034265	THOC1	96	76.901	Colobus_angolensis_palliatus
ENSNBRG00000005991	thoc1	98	71.987	ENSCGRG00001016464	Thoc1	97	71.987	Cricetulus_griseus_chok1gshd
ENSNBRG00000005991	thoc1	89	59.965	ENSCGRG00000003390	-	97	59.619	Cricetulus_griseus_crigri
ENSNBRG00000005991	thoc1	97	72.397	ENSCGRG00000010269	-	99	72.397	Cricetulus_griseus_crigri
ENSNBRG00000005991	thoc1	97	86.293	ENSCSEG00000012486	thoc1	99	86.495	Cynoglossus_semilaevis
ENSNBRG00000005991	thoc1	97	88.245	ENSCVAG00000020600	thoc1	98	88.245	Cyprinodon_variegatus
ENSNBRG00000005991	thoc1	96	83.150	ENSDARG00000088246	thoc1	97	83.150	Danio_rerio
ENSNBRG00000005991	thoc1	98	72.414	ENSDNOG00000019217	THOC1	97	72.414	Dasypus_novemcinctus
ENSNBRG00000005991	thoc1	98	68.175	ENSDORG00000008060	Thoc1	98	68.612	Dipodomys_ordii
ENSNBRG00000005991	thoc1	96	36.657	FBgn0037382	Hpr1	72	42.669	Drosophila_melanogaster
ENSNBRG00000005991	thoc1	87	55.965	ENSETEG00000004165	THOC1	96	55.614	Echinops_telfairi
ENSNBRG00000005991	thoc1	91	63.378	ENSEBUG00000005998	thoc1	97	64.154	Eptatretus_burgeri
ENSNBRG00000005991	thoc1	98	72.300	ENSEASG00005002549	THOC1	93	71.674	Equus_asinus_asinus
ENSNBRG00000005991	thoc1	98	72.770	ENSECAG00000009267	THOC1	87	72.770	Equus_caballus
ENSNBRG00000005991	thoc1	79	58.865	ENSEEUG00000012214	-	81	58.865	Erinaceus_europaeus
ENSNBRG00000005991	thoc1	97	85.312	ENSELUG00000023277	thoc1	97	85.312	Esox_lucius
ENSNBRG00000005991	thoc1	98	73.083	ENSFCAG00000022454	THOC1	84	73.083	Felis_catus
ENSNBRG00000005991	thoc1	97	72.613	ENSFALG00000006205	THOC1	99	72.613	Ficedula_albicollis
ENSNBRG00000005991	thoc1	98	72.770	ENSFDAG00000006842	THOC1	98	72.770	Fukomys_damarensis
ENSNBRG00000005991	thoc1	97	90.125	ENSFHEG00000008841	thoc1	98	90.125	Fundulus_heteroclitus
ENSNBRG00000005991	thoc1	97	87.736	ENSGMOG00000011486	thoc1	97	87.736	Gadus_morhua
ENSNBRG00000005991	thoc1	97	72.555	ENSGALG00000014915	THOC1	96	71.651	Gallus_gallus
ENSNBRG00000005991	thoc1	97	87.304	ENSGAFG00000021464	thoc1	98	87.304	Gambusia_affinis
ENSNBRG00000005991	thoc1	97	89.812	ENSGACG00000017361	thoc1	98	89.812	Gasterosteus_aculeatus
ENSNBRG00000005991	thoc1	97	74.132	ENSGAGG00000021230	-	94	74.132	Gopherus_agassizii
ENSNBRG00000005991	thoc1	98	72.770	ENSGGOG00000003013	THOC1	96	72.770	Gorilla_gorilla
ENSNBRG00000005991	thoc1	97	96.552	ENSHBUG00000009096	thoc1	98	96.552	Haplochromis_burtoni
ENSNBRG00000005991	thoc1	78	59.259	ENSHGLG00000009264	-	98	70.270	Heterocephalus_glaber_female
ENSNBRG00000005991	thoc1	98	73.083	ENSHGLG00000003712	-	97	73.083	Heterocephalus_glaber_female
ENSNBRG00000005991	thoc1	98	73.083	ENSHGLG00100003570	THOC1	97	73.083	Heterocephalus_glaber_male
ENSNBRG00000005991	thoc1	68	67.380	ENSHGLG00100002225	-	98	70.857	Heterocephalus_glaber_male
ENSNBRG00000005991	thoc1	97	72.857	ENSIPUG00000005306	thoc1	99	71.905	Ictalurus_punctatus
ENSNBRG00000005991	thoc1	97	72.871	ENSSTOG00000006484	THOC1	96	72.871	Ictidomys_tridecemlineatus
ENSNBRG00000005991	thoc1	52	72.886	ENSJJAG00000014893	-	96	72.886	Jaculus_jaculus
ENSNBRG00000005991	thoc1	97	89.028	ENSKMAG00000003904	thoc1	98	89.028	Kryptolebias_marmoratus
ENSNBRG00000005991	thoc1	97	90.125	ENSLBEG00000020372	thoc1	96	90.125	Labrus_bergylta
ENSNBRG00000005991	thoc1	97	72.756	ENSLACG00000014869	THOC1	96	72.441	Latimeria_chalumnae
ENSNBRG00000005991	thoc1	97	82.527	ENSLOCG00000002097	thoc1	97	82.215	Lepisosteus_oculatus
ENSNBRG00000005991	thoc1	98	72.770	ENSLAFG00000009585	THOC1	97	72.770	Loxodonta_africana
ENSNBRG00000005991	thoc1	98	72.770	ENSMFAG00000041520	THOC1	96	72.770	Macaca_fascicularis
ENSNBRG00000005991	thoc1	98	72.770	ENSMMUG00000004662	THOC1	97	72.770	Macaca_mulatta
ENSNBRG00000005991	thoc1	98	72.770	ENSMNEG00000040177	THOC1	96	72.770	Macaca_nemestrina
ENSNBRG00000005991	thoc1	98	72.770	ENSMLEG00000034201	THOC1	96	72.770	Mandrillus_leucophaeus
ENSNBRG00000005991	thoc1	95	88.942	ENSMAMG00000016747	thoc1	100	88.942	Mastacembelus_armatus
ENSNBRG00000005991	thoc1	97	96.238	ENSMZEG00005024609	thoc1	98	96.238	Maylandia_zebra
ENSNBRG00000005991	thoc1	97	72.057	ENSMGAG00000009811	THOC1	99	72.057	Meleagris_gallopavo
ENSNBRG00000005991	thoc1	98	71.518	ENSMAUG00000010272	Thoc1	97	71.518	Mesocricetus_auratus
ENSNBRG00000005991	thoc1	98	72.926	ENSMICG00000027200	THOC1	97	72.926	Microcebus_murinus
ENSNBRG00000005991	thoc1	98	70.736	ENSMOCG00000014536	-	84	70.736	Microtus_ochrogaster
ENSNBRG00000005991	thoc1	98	62.754	ENSMOCG00000014924	-	93	62.128	Microtus_ochrogaster
ENSNBRG00000005991	thoc1	92	92.642	ENSMMOG00000011772	thoc1	100	92.642	Mola_mola
ENSNBRG00000005991	thoc1	98	71.672	ENSMODG00000021482	THOC1	97	71.672	Monodelphis_domestica
ENSNBRG00000005991	thoc1	97	90.752	ENSMALG00000021872	thoc1	98	90.752	Monopterus_albus
ENSNBRG00000005991	thoc1	98	71.362	MGP_CAROLIEiJ_G0021989	Thoc1	97	71.362	Mus_caroli
ENSNBRG00000005991	thoc1	98	71.518	ENSMUSG00000024287	Thoc1	97	71.518	Mus_musculus
ENSNBRG00000005991	thoc1	98	71.518	MGP_PahariEiJ_G0018726	Thoc1	97	71.518	Mus_pahari
ENSNBRG00000005991	thoc1	98	71.518	MGP_SPRETEiJ_G0022905	Thoc1	97	71.518	Mus_spretus
ENSNBRG00000005991	thoc1	98	72.926	ENSMPUG00000005448	THOC1	97	72.926	Mustela_putorius_furo
ENSNBRG00000005991	thoc1	98	71.674	ENSMLUG00000004090	-	97	71.674	Myotis_lucifugus
ENSNBRG00000005991	thoc1	58	65.885	ENSMLUG00000024912	-	96	65.885	Myotis_lucifugus
ENSNBRG00000005991	thoc1	88	66.609	ENSMLUG00000027965	-	96	67.478	Myotis_lucifugus
ENSNBRG00000005991	thoc1	98	72.300	ENSNGAG00000001401	-	97	72.300	Nannospalax_galili
ENSNBRG00000005991	thoc1	97	58.889	ENSNGAG00000008061	-	97	58.889	Nannospalax_galili
ENSNBRG00000005991	thoc1	98	72.770	ENSNLEG00000006835	THOC1	97	72.770	Nomascus_leucogenys
ENSNBRG00000005991	thoc1	97	63.407	ENSMEUG00000009756	THOC1	82	75.966	Notamacropus_eugenii
ENSNBRG00000005991	thoc1	98	59.468	ENSOPRG00000001108	THOC1	97	59.468	Ochotona_princeps
ENSNBRG00000005991	thoc1	97	67.823	ENSODEG00000006623	THOC1	96	67.823	Octodon_degus
ENSNBRG00000005991	thoc1	97	96.082	ENSONIG00000009440	thoc1	96	96.063	Oreochromis_niloticus
ENSNBRG00000005991	thoc1	98	72.926	ENSOCUG00000011601	THOC1	97	72.926	Oryctolagus_cuniculus
ENSNBRG00000005991	thoc1	97	90.491	ENSORLG00000017629	thoc1	98	90.491	Oryzias_latipes
ENSNBRG00000005991	thoc1	97	89.969	ENSORLG00020007567	thoc1	98	89.969	Oryzias_latipes_hni
ENSNBRG00000005991	thoc1	97	90.125	ENSORLG00015007356	thoc1	97	91.162	Oryzias_latipes_hsok
ENSNBRG00000005991	thoc1	97	88.715	ENSOMEG00000008200	thoc1	98	88.558	Oryzias_melastigma
ENSNBRG00000005991	thoc1	98	69.640	ENSOGAG00000000470	THOC1	96	69.640	Otolemur_garnettii
ENSNBRG00000005991	thoc1	97	73.344	ENSOARG00000009238	THOC1	95	73.344	Ovis_aries
ENSNBRG00000005991	thoc1	98	72.770	ENSPPAG00000031812	THOC1	96	72.770	Pan_paniscus
ENSNBRG00000005991	thoc1	98	72.457	ENSPPRG00000023794	THOC1	96	76.812	Panthera_pardus
ENSNBRG00000005991	thoc1	98	72.457	ENSPTIG00000007469	THOC1	96	76.812	Panthera_tigris_altaica
ENSNBRG00000005991	thoc1	98	71.827	ENSPTRG00000009816	THOC1	97	71.827	Pan_troglodytes
ENSNBRG00000005991	thoc1	98	71.851	ENSPANG00000008665	THOC1	97	71.851	Papio_anubis
ENSNBRG00000005991	thoc1	97	81.847	ENSPKIG00000005906	thoc1	98	83.881	Paramormyrops_kingsleyae
ENSNBRG00000005991	thoc1	81	76.281	ENSPSIG00000007691	THOC1	97	76.281	Pelodiscus_sinensis
ENSNBRG00000005991	thoc1	95	85.968	ENSPMGG00000008279	thoc1	96	85.968	Periophthalmus_magnuspinnatus
ENSNBRG00000005991	thoc1	98	71.518	ENSPEMG00000021789	Thoc1	97	71.518	Peromyscus_maniculatus_bairdii
ENSNBRG00000005991	thoc1	74	72.597	ENSPCIG00000026942	THOC1	97	72.597	Phascolarctos_cinereus
ENSNBRG00000005991	thoc1	97	87.461	ENSPFOG00000011673	thoc1	98	87.461	Poecilia_formosa
ENSNBRG00000005991	thoc1	97	87.618	ENSPLAG00000019648	thoc1	98	87.618	Poecilia_latipinna
ENSNBRG00000005991	thoc1	97	87.618	ENSPMEG00000007083	thoc1	98	87.618	Poecilia_mexicana
ENSNBRG00000005991	thoc1	97	87.912	ENSPREG00000006719	thoc1	97	87.912	Poecilia_reticulata
ENSNBRG00000005991	thoc1	72	76.371	ENSPPYG00000009049	-	96	76.371	Pongo_abelii
ENSNBRG00000005991	thoc1	98	64.945	ENSPCAG00000005320	THOC1	97	64.632	Procavia_capensis
ENSNBRG00000005991	thoc1	98	72.144	ENSPCOG00000009234	THOC1	97	72.144	Propithecus_coquereli
ENSNBRG00000005991	thoc1	98	71.049	ENSPVAG00000004007	THOC1	97	71.049	Pteropus_vampyrus
ENSNBRG00000005991	thoc1	97	96.552	ENSPNYG00000019152	thoc1	98	96.552	Pundamilia_nyererei
ENSNBRG00000005991	thoc1	97	83.359	ENSPNAG00000023390	thoc1	98	83.046	Pygocentrus_nattereri
ENSNBRG00000005991	thoc1	89	52.120	ENSRNOG00000015332	Thoc1	95	58.167	Rattus_norvegicus
ENSNBRG00000005991	thoc1	98	71.981	ENSRBIG00000033738	THOC1	97	74.645	Rhinopithecus_bieti
ENSNBRG00000005991	thoc1	98	72.770	ENSRROG00000044988	THOC1	96	76.901	Rhinopithecus_roxellana
ENSNBRG00000005991	thoc1	98	72.457	ENSSBOG00000016556	THOC1	96	72.457	Saimiri_boliviensis_boliviensis
ENSNBRG00000005991	thoc1	98	72.770	ENSSHAG00000014829	THOC1	97	72.770	Sarcophilus_harrisii
ENSNBRG00000005991	thoc1	97	85.423	ENSSFOG00015021527	thoc1	98	85.423	Scleropages_formosus
ENSNBRG00000005991	thoc1	99	86.043	ENSSMAG00000018465	thoc1	95	90.391	Scophthalmus_maximus
ENSNBRG00000005991	thoc1	97	92.163	ENSSDUG00000016810	thoc1	98	92.163	Seriola_dumerili
ENSNBRG00000005991	thoc1	97	91.850	ENSSLDG00000015555	thoc1	98	91.850	Seriola_lalandi_dorsalis
ENSNBRG00000005991	thoc1	90	70.385	ENSSARG00000006910	THOC1	85	72.874	Sorex_araneus
ENSNBRG00000005991	thoc1	97	73.365	ENSSPUG00000007238	THOC1	96	73.365	Sphenodon_punctatus
ENSNBRG00000005991	thoc1	99	86.149	ENSSPAG00000018847	thoc1	99	86.149	Stegastes_partitus
ENSNBRG00000005991	thoc1	98	72.770	ENSSSCG00000025653	THOC1	91	72.770	Sus_scrofa
ENSNBRG00000005991	thoc1	97	73.228	ENSTGUG00000010204	THOC1	96	73.228	Taeniopygia_guttata
ENSNBRG00000005991	thoc1	97	88.715	ENSTRUG00000013518	thoc1	98	88.715	Takifugu_rubripes
ENSNBRG00000005991	thoc1	97	88.401	ENSTNIG00000008473	thoc1	97	88.401	Tetraodon_nigroviridis
ENSNBRG00000005991	thoc1	98	65.258	ENSTBEG00000016920	THOC1	97	65.258	Tupaia_belangeri
ENSNBRG00000005991	thoc1	98	66.667	ENSTTRG00000016664	THOC1	97	66.667	Tursiops_truncatus
ENSNBRG00000005991	thoc1	98	73.083	ENSUAMG00000002527	THOC1	98	72.397	Ursus_americanus
ENSNBRG00000005991	thoc1	98	73.083	ENSUMAG00000019693	THOC1	97	73.083	Ursus_maritimus
ENSNBRG00000005991	thoc1	69	67.635	ENSVPAG00000003726	-	66	67.635	Vicugna_pacos
ENSNBRG00000005991	thoc1	98	72.770	ENSVVUG00000004384	THOC1	97	72.770	Vulpes_vulpes
ENSNBRG00000005991	thoc1	96	70.912	ENSXETG00000003155	thoc1	94	70.912	Xenopus_tropicalis
ENSNBRG00000005991	thoc1	94	83.197	ENSXCOG00000016085	thoc1	89	83.197	Xiphophorus_couchianus
ENSNBRG00000005991	thoc1	97	88.088	ENSXMAG00000002353	thoc1	98	88.088	Xiphophorus_maculatus