EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000005992 (Gene tree)
Gene ID: -
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3439 bases
Position: chrJH422285.1:1888611-1892049
Accession: ZDB-GENE-040426-1391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007685	RRM_1	PF00076.22	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007897	-	624	-	ENSNBRP00000007685	207 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000005992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000005992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000005992	tra2a	52	30.928	ENSNBRG00000021290	elavl1a	54	30.928
ENSNBRG00000005992	tra2a	54	80.180	ENSNBRG00000016092	TRA2B	57	72.078
ENSNBRG00000005992	tra2a	63	86.260	ENSNBRG00000022760	-	83	81.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000005992	tra2a	73	90.850	ENSG00000164548	TRA2A	84	89.542	Homo_sapiens
ENSNBRG00000005992	tra2a	73	92.105	ENSAPOG00000017425	tra2a	93	90.674	Acanthochromis_polyacanthus
ENSNBRG00000005992	tra2a	91	95.238	ENSACIG00000001333	tra2a	99	95.238	Amphilophus_citrinellus
ENSNBRG00000005992	tra2a	73	82.941	ENSAOCG00000015445	tra2a	55	82.941	Amphiprion_ocellaris
ENSNBRG00000005992	tra2a	73	92.763	ENSAPEG00000018557	tra2a	97	91.192	Amphiprion_percula
ENSNBRG00000005992	tra2a	100	81.778	ENSATEG00000000671	tra2a	66	87.940	Anabas_testudineus
ENSNBRG00000005992	tra2a	73	84.967	ENSAPLG00000013689	TRA2A	55	84.967	Anas_platyrhynchos
ENSNBRG00000005992	tra2a	73	87.097	ENSACAG00000013502	TRA2A	54	87.097	Anolis_carolinensis
ENSNBRG00000005992	tra2a	68	90.141	ENSANAG00000035184	TRA2A	62	88.732	Aotus_nancymaae
ENSNBRG00000005992	tra2a	87	88.442	ENSACLG00000024845	tra2a	66	88.442	Astatotilapia_calliptera
ENSNBRG00000005992	tra2a	75	87.975	ENSAMXG00000005553	tra2a	63	87.742	Astyanax_mexicanus
ENSNBRG00000005992	tra2a	73	90.196	ENSBTAG00000012622	TRA2A	54	88.889	Bos_taurus
ENSNBRG00000005992	tra2a	79	88.485	ENSCJAG00000045802	-	57	86.928	Callithrix_jacchus
ENSNBRG00000005992	tra2a	73	90.850	ENSCJAG00000001509	-	54	89.542	Callithrix_jacchus
ENSNBRG00000005992	tra2a	73	90.196	ENSCAFG00000002788	TRA2A	54	88.889	Canis_familiaris
ENSNBRG00000005992	tra2a	73	90.196	ENSCAFG00020002745	TRA2A	57	88.889	Canis_lupus_dingo
ENSNBRG00000005992	tra2a	73	90.850	ENSTSYG00000000388	TRA2A	84	89.542	Carlito_syrichta
ENSNBRG00000005992	tra2a	73	70.588	ENSCAPG00000017377	TRA2A	52	69.281	Cavia_aperea
ENSNBRG00000005992	tra2a	73	90.850	ENSCPOG00000010739	TRA2A	54	89.542	Cavia_porcellus
ENSNBRG00000005992	tra2a	73	90.850	ENSCCAG00000019576	TRA2A	84	89.542	Cebus_capucinus
ENSNBRG00000005992	tra2a	73	90.850	ENSCATG00000041219	TRA2A	84	89.542	Cercocebus_atys
ENSNBRG00000005992	tra2a	73	90.850	ENSCLAG00000007917	TRA2A	54	89.542	Chinchilla_lanigera
ENSNBRG00000005992	tra2a	73	90.850	ENSCSAG00000014051	TRA2A	54	89.542	Chlorocebus_sabaeus
ENSNBRG00000005992	tra2a	73	90.850	ENSCHOG00000001130	TRA2A	54	89.542	Choloepus_hoffmanni
ENSNBRG00000005992	tra2a	73	88.235	ENSCPBG00000022466	TRA2A	53	88.235	Chrysemys_picta_bellii
ENSNBRG00000005992	tra2a	73	90.850	ENSCANG00000031292	TRA2A	84	89.542	Colobus_angolensis_palliatus
ENSNBRG00000005992	tra2a	73	89.610	ENSCGRG00001019980	Tra2a	55	89.610	Cricetulus_griseus_chok1gshd
ENSNBRG00000005992	tra2a	73	89.610	ENSCGRG00000006087	Tra2a	57	89.610	Cricetulus_griseus_crigri
ENSNBRG00000005992	tra2a	73	84.211	ENSCSEG00000012193	tra2a	56	94.643	Cynoglossus_semilaevis
ENSNBRG00000005992	tra2a	72	78.235	ENSDARG00000007863	tra2a	65	79.845	Danio_rerio
ENSNBRG00000005992	tra2a	73	90.850	ENSDNOG00000039446	TRA2A	54	89.542	Dasypus_novemcinctus
ENSNBRG00000005992	tra2a	73	90.850	ENSDORG00000009361	Tra2a	54	89.542	Dipodomys_ordii
ENSNBRG00000005992	tra2a	73	89.032	ENSETEG00000007250	TRA2A	54	89.032	Echinops_telfairi
ENSNBRG00000005992	tra2a	73	90.196	ENSEASG00005022002	TRA2A	54	88.889	Equus_asinus_asinus
ENSNBRG00000005992	tra2a	73	90.196	ENSECAG00000011508	TRA2A	54	88.889	Equus_caballus
ENSNBRG00000005992	tra2a	73	90.850	ENSEEUG00000015674	TRA2A	54	89.542	Erinaceus_europaeus
ENSNBRG00000005992	tra2a	54	78.195	ENSELUG00000005846	tra2a	52	75.449	Esox_lucius
ENSNBRG00000005992	tra2a	73	90.196	ENSFCAG00000005361	TRA2A	54	88.889	Felis_catus
ENSNBRG00000005992	tra2a	73	84.967	ENSFALG00000009605	TRA2A	55	84.967	Ficedula_albicollis
ENSNBRG00000005992	tra2a	73	90.196	ENSFDAG00000004949	TRA2A	54	90.196	Fukomys_damarensis
ENSNBRG00000005992	tra2a	70	82.781	ENSGMOG00000013740	tra2a	59	74.286	Gadus_morhua
ENSNBRG00000005992	tra2a	73	84.967	ENSGALG00000010973	TRA2A	52	84.967	Gallus_gallus
ENSNBRG00000005992	tra2a	73	84.615	ENSGACG00000006878	tra2a	55	84.615	Gasterosteus_aculeatus
ENSNBRG00000005992	tra2a	73	86.928	ENSGAGG00000005793	TRA2A	53	86.928	Gopherus_agassizii
ENSNBRG00000005992	tra2a	73	90.850	ENSGGOG00000009053	TRA2A	84	89.542	Gorilla_gorilla
ENSNBRG00000005992	tra2a	87	87.940	ENSHBUG00000018234	tra2a	66	87.940	Haplochromis_burtoni
ENSNBRG00000005992	tra2a	73	90.850	ENSHGLG00000012168	TRA2A	54	89.542	Heterocephalus_glaber_female
ENSNBRG00000005992	tra2a	73	90.850	ENSHGLG00100014577	TRA2A	54	89.542	Heterocephalus_glaber_male
ENSNBRG00000005992	tra2a	53	80.000	ENSHCOG00000018058	-	99	78.571	Hippocampus_comes
ENSNBRG00000005992	tra2a	88	66.146	ENSHCOG00000006314	tra2a	80	65.000	Hippocampus_comes
ENSNBRG00000005992	tra2a	73	90.850	ENSSTOG00000012073	TRA2A	54	89.542	Ictidomys_tridecemlineatus
ENSNBRG00000005992	tra2a	73	90.850	ENSJJAG00000022787	Tra2a	56	89.542	Jaculus_jaculus
ENSNBRG00000005992	tra2a	72	80.588	ENSLBEG00000005297	tra2a	58	80.588	Labrus_bergylta
ENSNBRG00000005992	tra2a	73	88.816	ENSLACG00000014765	TRA2A	54	88.816	Latimeria_chalumnae
ENSNBRG00000005992	tra2a	55	85.841	ENSLOCG00000009558	-	53	79.747	Lepisosteus_oculatus
ENSNBRG00000005992	tra2a	73	78.235	ENSLOCG00000011615	-	55	78.235	Lepisosteus_oculatus
ENSNBRG00000005992	tra2a	73	90.196	ENSLAFG00000006598	TRA2A	54	90.196	Loxodonta_africana
ENSNBRG00000005992	tra2a	73	90.850	ENSMFAG00000043211	TRA2A	84	89.542	Macaca_fascicularis
ENSNBRG00000005992	tra2a	73	90.850	ENSMMUG00000006286	TRA2A	82	88.732	Macaca_mulatta
ENSNBRG00000005992	tra2a	73	90.850	ENSMNEG00000040670	TRA2A	84	89.542	Macaca_nemestrina
ENSNBRG00000005992	tra2a	73	90.850	ENSMLEG00000032154	TRA2A	84	89.542	Mandrillus_leucophaeus
ENSNBRG00000005992	tra2a	57	86.029	ENSMAMG00000008575	tra2a	53	86.029	Mastacembelus_armatus
ENSNBRG00000005992	tra2a	87	88.442	ENSMZEG00005009142	tra2a	66	88.442	Maylandia_zebra
ENSNBRG00000005992	tra2a	73	86.275	ENSMGAG00000010514	TRA2A	54	86.275	Meleagris_gallopavo
ENSNBRG00000005992	tra2a	86	76.111	ENSMICG00000036849	-	57	74.510	Microcebus_murinus
ENSNBRG00000005992	tra2a	73	90.850	ENSMICG00000043639	-	84	89.542	Microcebus_murinus
ENSNBRG00000005992	tra2a	79	82.317	ENSMOCG00000010249	-	57	81.699	Microtus_ochrogaster
ENSNBRG00000005992	tra2a	89	90.811	ENSMMOG00000020174	tra2a	51	89.542	Mola_mola
ENSNBRG00000005992	tra2a	73	90.850	ENSMODG00000000807	TRA2A	54	89.542	Monodelphis_domestica
ENSNBRG00000005992	tra2a	67	83.019	ENSMALG00000020875	tra2a	57	83.140	Monopterus_albus
ENSNBRG00000005992	tra2a	73	89.610	ENSMUSG00000029817	Tra2a	55	89.610	Mus_musculus
ENSNBRG00000005992	tra2a	73	89.610	MGP_PahariEiJ_G0022115	Tra2a	55	89.610	Mus_pahari
ENSNBRG00000005992	tra2a	73	89.610	MGP_SPRETEiJ_G0029368	Tra2a	55	89.610	Mus_spretus
ENSNBRG00000005992	tra2a	73	90.196	ENSMPUG00000013480	TRA2A	54	88.889	Mustela_putorius_furo
ENSNBRG00000005992	tra2a	73	88.889	ENSMLUG00000013972	TRA2A	54	88.889	Myotis_lucifugus
ENSNBRG00000005992	tra2a	73	90.196	ENSNGAG00000023805	Tra2a	54	88.889	Nannospalax_galili
ENSNBRG00000005992	tra2a	73	90.850	ENSNLEG00000014794	TRA2A	84	89.542	Nomascus_leucogenys
ENSNBRG00000005992	tra2a	87	64.088	ENSNLEG00000029659	-	88	67.974	Nomascus_leucogenys
ENSNBRG00000005992	tra2a	73	90.196	ENSMEUG00000001202	TRA2A	54	90.196	Notamacropus_eugenii
ENSNBRG00000005992	tra2a	73	90.196	ENSOPRG00000007606	TRA2A	54	88.889	Ochotona_princeps
ENSNBRG00000005992	tra2a	73	90.850	ENSODEG00000008335	TRA2A	54	89.542	Octodon_degus
ENSNBRG00000005992	tra2a	87	87.129	ENSONIG00000004503	tra2a	66	87.129	Oreochromis_niloticus
ENSNBRG00000005992	tra2a	73	82.278	ENSOANG00000014202	TRA2A	55	81.646	Ornithorhynchus_anatinus
ENSNBRG00000005992	tra2a	73	90.850	ENSOCUG00000024139	TRA2A	54	89.542	Oryctolagus_cuniculus
ENSNBRG00000005992	tra2a	73	76.129	ENSORLG00000022191	tra2a	56	76.129	Oryzias_latipes
ENSNBRG00000005992	tra2a	73	75.484	ENSORLG00020003490	tra2a	55	75.484	Oryzias_latipes_hni
ENSNBRG00000005992	tra2a	73	74.839	ENSORLG00015015485	tra2a	55	74.839	Oryzias_latipes_hsok
ENSNBRG00000005992	tra2a	73	75.000	ENSOMEG00000017864	tra2a	54	75.000	Oryzias_melastigma
ENSNBRG00000005992	tra2a	73	90.850	ENSOGAG00000009733	TRA2A	54	89.542	Otolemur_garnettii
ENSNBRG00000005992	tra2a	73	90.196	ENSOARG00000013147	TRA2A	54	88.889	Ovis_aries
ENSNBRG00000005992	tra2a	73	88.387	ENSOARG00000002323	-	59	89.032	Ovis_aries
ENSNBRG00000005992	tra2a	73	90.850	ENSPPAG00000034382	TRA2A	84	89.542	Pan_paniscus
ENSNBRG00000005992	tra2a	73	90.196	ENSPPRG00000015216	TRA2A	54	88.889	Panthera_pardus
ENSNBRG00000005992	tra2a	73	90.196	ENSPTIG00000021114	TRA2A	54	88.889	Panthera_tigris_altaica
ENSNBRG00000005992	tra2a	75	91.026	ENSPTRG00000018988	TRA2A	84	89.542	Pan_troglodytes
ENSNBRG00000005992	tra2a	73	90.850	ENSPTRG00000046098	-	54	89.542	Pan_troglodytes
ENSNBRG00000005992	tra2a	73	90.850	ENSPANG00000014541	TRA2A	54	89.542	Papio_anubis
ENSNBRG00000005992	tra2a	73	77.059	ENSPKIG00000012298	tra2a	56	77.059	Paramormyrops_kingsleyae
ENSNBRG00000005992	tra2a	73	88.235	ENSPSIG00000014993	TRA2A	55	86.928	Pelodiscus_sinensis
ENSNBRG00000005992	tra2a	73	90.196	ENSPEMG00000008564	-	54	90.196	Peromyscus_maniculatus_bairdii
ENSNBRG00000005992	tra2a	73	91.503	ENSPCIG00000007917	TRA2A	54	90.196	Phascolarctos_cinereus
ENSNBRG00000005992	tra2a	73	90.850	ENSPPYG00000017728	TRA2A	54	89.542	Pongo_abelii
ENSNBRG00000005992	tra2a	73	90.196	ENSPCAG00000004148	TRA2A	55	90.196	Procavia_capensis
ENSNBRG00000005992	tra2a	73	89.542	ENSPVAG00000011298	TRA2A	54	89.542	Pteropus_vampyrus
ENSNBRG00000005992	tra2a	97	97.059	ENSPNYG00000020134	tra2a	99	97.059	Pundamilia_nyererei
ENSNBRG00000005992	tra2a	73	78.824	ENSPNAG00000000482	tra2a	56	78.824	Pygocentrus_nattereri
ENSNBRG00000005992	tra2a	73	89.610	ENSRNOG00000009156	Tra2a	55	89.610	Rattus_norvegicus
ENSNBRG00000005992	tra2a	54	95.536	ENSRBIG00000036805	TRA2A	58	95.536	Rhinopithecus_bieti
ENSNBRG00000005992	tra2a	73	90.850	ENSRROG00000030758	TRA2A	84	89.542	Rhinopithecus_roxellana
ENSNBRG00000005992	tra2a	73	90.850	ENSSBOG00000031562	TRA2A	84	89.542	Saimiri_boliviensis_boliviensis
ENSNBRG00000005992	tra2a	73	91.503	ENSSHAG00000005727	TRA2A	54	90.196	Sarcophilus_harrisii
ENSNBRG00000005992	tra2a	73	86.184	ENSSFOG00015014004	tra2a	56	77.647	Scleropages_formosus
ENSNBRG00000005992	tra2a	87	97.268	ENSSDUG00000005610	tra2a	64	97.268	Seriola_dumerili
ENSNBRG00000005992	tra2a	73	92.763	ENSSLDG00000025577	tra2a	98	94.054	Seriola_lalandi_dorsalis
ENSNBRG00000005992	tra2a	73	89.032	ENSSPUG00000006143	TRA2A	54	89.032	Sphenodon_punctatus
ENSNBRG00000005992	tra2a	87	88.442	ENSSPAG00000004184	tra2a	66	88.442	Stegastes_partitus
ENSNBRG00000005992	tra2a	73	90.196	ENSSSCG00000015387	TRA2A	54	88.889	Sus_scrofa
ENSNBRG00000005992	tra2a	75	83.439	ENSTGUG00000002795	TRA2A	56	81.699	Taeniopygia_guttata
ENSNBRG00000005992	tra2a	73	89.542	ENSTTRG00000008922	TRA2A	54	88.235	Tursiops_truncatus
ENSNBRG00000005992	tra2a	73	90.196	ENSUMAG00000001181	TRA2A	79	90.196	Ursus_maritimus
ENSNBRG00000005992	tra2a	73	90.196	ENSVVUG00000001045	TRA2A	54	88.889	Vulpes_vulpes
ENSNBRG00000005992	tra2a	73	84.967	ENSXETG00000007397	tra2a	56	83.333	Xenopus_tropicalis