EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006000 (Gene tree)
Gene ID: 102784376
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54 kDa protein-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2544 bases
Position: chrJH422346.1:169243-171786
Accession: 102784376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007726	SRP54	PF00448.22	8.5e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000007937	-	1323	XM_006800583	ENSNBRP00000007726	440 (aa)	XP_006800646	-

Gene Model

Click here to download ENSNBRG00000006000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006000	srp54	100	95.682	ENSG00000100883	SRP54	100	95.682	Homo_sapiens
ENSNBRG00000006000	srp54	100	99.545	ENSAPOG00000011314	srp54	87	99.545	Acanthochromis_polyacanthus
ENSNBRG00000006000	srp54	100	95.682	ENSAMEG00000015544	SRP54	87	95.682	Ailuropoda_melanoleuca
ENSNBRG00000006000	srp54	88	98.442	ENSACIG00000022831	srp54	83	98.442	Amphilophus_citrinellus
ENSNBRG00000006000	srp54	100	99.545	ENSAOCG00000019401	srp54	87	99.545	Amphiprion_ocellaris
ENSNBRG00000006000	srp54	100	99.545	ENSAPEG00000001977	srp54	93	99.545	Amphiprion_percula
ENSNBRG00000006000	srp54	100	99.773	ENSATEG00000013877	srp54	87	99.773	Anabas_testudineus
ENSNBRG00000006000	srp54	93	94.878	ENSAPLG00000010125	SRP54	82	94.878	Anas_platyrhynchos
ENSNBRG00000006000	srp54	100	95.000	ENSACAG00000002103	-	87	95.000	Anolis_carolinensis
ENSNBRG00000006000	srp54	99	92.396	ENSACAG00000010631	-	100	92.396	Anolis_carolinensis
ENSNBRG00000006000	srp54	74	79.456	ENSACAG00000001124	-	100	79.456	Anolis_carolinensis
ENSNBRG00000006000	srp54	100	95.682	ENSANAG00000022133	SRP54	87	95.682	Aotus_nancymaae
ENSNBRG00000006000	srp54	100	100.000	ENSACLG00000015866	srp54	87	100.000	Astatotilapia_calliptera
ENSNBRG00000006000	srp54	100	97.727	ENSAMXG00000032669	SRP54	87	97.727	Astyanax_mexicanus
ENSNBRG00000006000	srp54	100	95.682	ENSBTAG00000019085	SRP54	87	95.682	Bos_taurus
ENSNBRG00000006000	srp54	98	73.963	WBGene00009012	F21D5.7	87	73.963	Caenorhabditis_elegans
ENSNBRG00000006000	srp54	100	95.682	ENSCJAG00000006581	SRP54	97	95.682	Callithrix_jacchus
ENSNBRG00000006000	srp54	100	95.682	ENSCAFG00000013331	SRP54	87	95.682	Canis_familiaris
ENSNBRG00000006000	srp54	100	95.682	ENSCAFG00020023427	SRP54	87	95.682	Canis_lupus_dingo
ENSNBRG00000006000	srp54	100	95.682	ENSCHIG00000026345	SRP54	87	95.682	Capra_hircus
ENSNBRG00000006000	srp54	100	95.455	ENSTSYG00000002680	-	97	95.455	Carlito_syrichta
ENSNBRG00000006000	srp54	94	82.126	ENSTSYG00000035333	-	80	82.126	Carlito_syrichta
ENSNBRG00000006000	srp54	88	58.519	ENSCAPG00000008780	SRP54	85	58.519	Cavia_aperea
ENSNBRG00000006000	srp54	100	95.455	ENSCPOG00000003691	SRP54	87	95.455	Cavia_porcellus
ENSNBRG00000006000	srp54	95	95.704	ENSCCAG00000024179	SRP54	100	95.704	Cebus_capucinus
ENSNBRG00000006000	srp54	100	95.682	ENSCATG00000034083	SRP54	97	95.682	Cercocebus_atys
ENSNBRG00000006000	srp54	100	95.682	ENSCLAG00000015076	SRP54	87	95.682	Chinchilla_lanigera
ENSNBRG00000006000	srp54	100	95.682	ENSCSAG00000015575	SRP54	87	95.682	Chlorocebus_sabaeus
ENSNBRG00000006000	srp54	95	82.734	ENSCHOG00000008986	SRP54	86	82.734	Choloepus_hoffmanni
ENSNBRG00000006000	srp54	100	95.682	ENSCPBG00000026195	SRP54	87	95.682	Chrysemys_picta_bellii
ENSNBRG00000006000	srp54	100	83.409	ENSCING00000007380	-	87	83.409	Ciona_intestinalis
ENSNBRG00000006000	srp54	100	95.682	ENSCANG00000028532	SRP54	97	95.682	Colobus_angolensis_palliatus
ENSNBRG00000006000	srp54	100	95.682	ENSCGRG00001009525	-	87	95.682	Cricetulus_griseus_chok1gshd
ENSNBRG00000006000	srp54	73	95.950	ENSCGRG00000009453	-	74	95.950	Cricetulus_griseus_crigri
ENSNBRG00000006000	srp54	100	98.636	ENSCSEG00000012392	srp54	87	98.636	Cynoglossus_semilaevis
ENSNBRG00000006000	srp54	100	99.091	ENSCVAG00000010395	srp54	87	99.091	Cyprinodon_variegatus
ENSNBRG00000006000	srp54	100	98.182	ENSDARG00000098367	srp54	87	98.182	Danio_rerio
ENSNBRG00000006000	srp54	100	95.682	ENSDNOG00000032525	SRP54	87	95.682	Dasypus_novemcinctus
ENSNBRG00000006000	srp54	88	77.835	ENSDORG00000005159	-	83	77.835	Dipodomys_ordii
ENSNBRG00000006000	srp54	96	78.860	FBgn0010747	Srp54k	85	78.341	Drosophila_melanogaster
ENSNBRG00000006000	srp54	95	55.981	ENSETEG00000012102	-	99	55.981	Echinops_telfairi
ENSNBRG00000006000	srp54	100	95.227	ENSETEG00000016307	-	87	95.227	Echinops_telfairi
ENSNBRG00000006000	srp54	100	88.864	ENSEBUG00000009437	-	87	88.864	Eptatretus_burgeri
ENSNBRG00000006000	srp54	100	95.682	ENSEASG00005002057	SRP54	87	95.682	Equus_asinus_asinus
ENSNBRG00000006000	srp54	99	95.392	ENSECAG00000018042	SRP54	86	95.392	Equus_caballus
ENSNBRG00000006000	srp54	100	84.545	ENSEEUG00000001511	SRP54	87	84.545	Erinaceus_europaeus
ENSNBRG00000006000	srp54	100	97.500	ENSELUG00000003395	srp54	87	97.500	Esox_lucius
ENSNBRG00000006000	srp54	100	95.455	ENSFCAG00000032033	SRP54	87	95.455	Felis_catus
ENSNBRG00000006000	srp54	100	95.227	ENSFALG00000005995	SRP54	87	95.227	Ficedula_albicollis
ENSNBRG00000006000	srp54	100	95.682	ENSFDAG00000016767	SRP54	87	95.682	Fukomys_damarensis
ENSNBRG00000006000	srp54	100	99.318	ENSFHEG00000004263	srp54	87	99.318	Fundulus_heteroclitus
ENSNBRG00000006000	srp54	100	91.818	ENSGMOG00000011391	srp54	92	91.818	Gadus_morhua
ENSNBRG00000006000	srp54	100	95.227	ENSGALG00000023135	SRP54	87	95.227	Gallus_gallus
ENSNBRG00000006000	srp54	100	99.318	ENSGAFG00000011586	srp54	87	99.318	Gambusia_affinis
ENSNBRG00000006000	srp54	100	98.864	ENSGACG00000004181	srp54	87	98.864	Gasterosteus_aculeatus
ENSNBRG00000006000	srp54	100	95.682	ENSGAGG00000014766	SRP54	87	95.682	Gopherus_agassizii
ENSNBRG00000006000	srp54	100	95.682	ENSGGOG00000002926	SRP54	97	95.682	Gorilla_gorilla
ENSNBRG00000006000	srp54	100	100.000	ENSHBUG00000005678	srp54	87	100.000	Haplochromis_burtoni
ENSNBRG00000006000	srp54	100	95.682	ENSHGLG00000002850	SRP54	87	95.682	Heterocephalus_glaber_female
ENSNBRG00000006000	srp54	100	95.682	ENSHGLG00100005263	SRP54	87	95.682	Heterocephalus_glaber_male
ENSNBRG00000006000	srp54	100	67.800	ENSHGLG00100007281	-	88	67.800	Heterocephalus_glaber_male
ENSNBRG00000006000	srp54	100	97.727	ENSHCOG00000021127	srp54	87	97.727	Hippocampus_comes
ENSNBRG00000006000	srp54	100	97.273	ENSIPUG00000001420	srp54	87	97.273	Ictalurus_punctatus
ENSNBRG00000006000	srp54	100	95.682	ENSSTOG00000016023	SRP54	87	95.682	Ictidomys_tridecemlineatus
ENSNBRG00000006000	srp54	100	90.227	ENSJJAG00000013417	-	87	90.227	Jaculus_jaculus
ENSNBRG00000006000	srp54	100	74.318	ENSJJAG00000016404	-	100	74.318	Jaculus_jaculus
ENSNBRG00000006000	srp54	100	98.864	ENSKMAG00000007707	srp54	87	98.864	Kryptolebias_marmoratus
ENSNBRG00000006000	srp54	100	99.773	ENSLBEG00000018690	srp54	87	99.773	Labrus_bergylta
ENSNBRG00000006000	srp54	100	99.773	ENSLBEG00000021122	srp54	87	99.773	Labrus_bergylta
ENSNBRG00000006000	srp54	100	95.455	ENSLACG00000017890	SRP54	87	95.455	Latimeria_chalumnae
ENSNBRG00000006000	srp54	100	97.955	ENSLOCG00000009440	srp54	87	97.955	Lepisosteus_oculatus
ENSNBRG00000006000	srp54	100	95.682	ENSLAFG00000012007	SRP54	87	95.682	Loxodonta_africana
ENSNBRG00000006000	srp54	100	95.682	ENSMFAG00000044371	SRP54	97	95.682	Macaca_fascicularis
ENSNBRG00000006000	srp54	100	95.682	ENSMMUG00000015073	FAM177A1	97	95.682	Macaca_mulatta
ENSNBRG00000006000	srp54	100	95.682	ENSMNEG00000006947	SRP54	97	95.682	Macaca_nemestrina
ENSNBRG00000006000	srp54	100	95.682	ENSMLEG00000042251	SRP54	97	95.682	Mandrillus_leucophaeus
ENSNBRG00000006000	srp54	100	100.000	ENSMAMG00000004803	srp54	87	100.000	Mastacembelus_armatus
ENSNBRG00000006000	srp54	100	100.000	ENSMZEG00005027528	srp54	87	100.000	Maylandia_zebra
ENSNBRG00000006000	srp54	97	94.353	ENSMGAG00000012481	SRP54	84	94.353	Meleagris_gallopavo
ENSNBRG00000006000	srp54	100	95.909	ENSMAUG00000014447	-	87	95.909	Mesocricetus_auratus
ENSNBRG00000006000	srp54	100	95.682	ENSMICG00000010270	SRP54	87	95.682	Microcebus_murinus
ENSNBRG00000006000	srp54	100	95.909	ENSMOCG00000000948	-	100	95.909	Microtus_ochrogaster
ENSNBRG00000006000	srp54	89	96.410	ENSMMOG00000020303	srp54	85	96.410	Mola_mola
ENSNBRG00000006000	srp54	100	95.682	ENSMODG00000012925	-	87	95.682	Monodelphis_domestica
ENSNBRG00000006000	srp54	100	95.682	ENSMODG00000023150	-	87	95.682	Monodelphis_domestica
ENSNBRG00000006000	srp54	86	99.736	ENSMALG00000009163	srp54	84	99.736	Monopterus_albus
ENSNBRG00000006000	srp54	100	95.909	MGP_CAROLIEiJ_G0017754	-	87	95.909	Mus_caroli
ENSNBRG00000006000	srp54	100	95.909	ENSMUSG00000112449	Srp54b	87	95.909	Mus_musculus
ENSNBRG00000006000	srp54	100	95.909	ENSMUSG00000073079	Srp54a	87	95.909	Mus_musculus
ENSNBRG00000006000	srp54	100	95.000	ENSMUSG00000079108	Srp54c	87	95.000	Mus_musculus
ENSNBRG00000006000	srp54	100	95.909	MGP_PahariEiJ_G0029510	-	87	95.909	Mus_pahari
ENSNBRG00000006000	srp54	100	95.682	ENSMPUG00000016302	SRP54	87	95.682	Mustela_putorius_furo
ENSNBRG00000006000	srp54	100	95.000	ENSMLUG00000008958	SRP54	87	95.000	Myotis_lucifugus
ENSNBRG00000006000	srp54	100	85.000	ENSNGAG00000019806	-	86	85.000	Nannospalax_galili
ENSNBRG00000006000	srp54	100	95.682	ENSNLEG00000003496	SRP54	97	95.682	Nomascus_leucogenys
ENSNBRG00000006000	srp54	64	94.643	ENSMEUG00000000138	-	63	94.643	Notamacropus_eugenii
ENSNBRG00000006000	srp54	100	95.682	ENSODEG00000004865	SRP54	87	95.682	Octodon_degus
ENSNBRG00000006000	srp54	100	100.000	ENSONIG00000011768	srp54	87	100.000	Oreochromis_niloticus
ENSNBRG00000006000	srp54	100	95.682	ENSOANG00000014051	SRP54	87	95.682	Ornithorhynchus_anatinus
ENSNBRG00000006000	srp54	100	95.000	ENSOCUG00000007838	SRP54	87	95.000	Oryctolagus_cuniculus
ENSNBRG00000006000	srp54	100	100.000	ENSORLG00000010027	srp54	87	100.000	Oryzias_latipes
ENSNBRG00000006000	srp54	100	100.000	ENSORLG00020001878	srp54	87	100.000	Oryzias_latipes_hni
ENSNBRG00000006000	srp54	100	100.000	ENSORLG00015021866	srp54	87	100.000	Oryzias_latipes_hsok
ENSNBRG00000006000	srp54	100	99.773	ENSOMEG00000020952	srp54	87	99.773	Oryzias_melastigma
ENSNBRG00000006000	srp54	100	95.682	ENSOGAG00000012188	SRP54	87	95.682	Otolemur_garnettii
ENSNBRG00000006000	srp54	100	95.682	ENSOARG00000007160	SRP54	87	95.682	Ovis_aries
ENSNBRG00000006000	srp54	100	95.682	ENSPPAG00000017434	SRP54	97	95.682	Pan_paniscus
ENSNBRG00000006000	srp54	100	94.545	ENSPPRG00000014047	SRP54	97	94.545	Panthera_pardus
ENSNBRG00000006000	srp54	100	95.455	ENSPTIG00000000744	SRP54	84	95.455	Panthera_tigris_altaica
ENSNBRG00000006000	srp54	100	95.682	ENSPTRG00000006259	FAM177A1	97	95.682	Pan_troglodytes
ENSNBRG00000006000	srp54	100	95.682	ENSPANG00000023853	SRP54	97	95.682	Papio_anubis
ENSNBRG00000006000	srp54	100	97.727	ENSPKIG00000001953	srp54	87	97.727	Paramormyrops_kingsleyae
ENSNBRG00000006000	srp54	100	95.455	ENSPSIG00000006476	SRP54	87	95.455	Pelodiscus_sinensis
ENSNBRG00000006000	srp54	90	95.455	ENSPMGG00000004127	srp54	86	95.455	Periophthalmus_magnuspinnatus
ENSNBRG00000006000	srp54	100	82.045	ENSPEMG00000019634	-	86	82.045	Peromyscus_maniculatus_bairdii
ENSNBRG00000006000	srp54	100	89.773	ENSPMAG00000006078	-	87	89.773	Petromyzon_marinus
ENSNBRG00000006000	srp54	100	95.682	ENSPCIG00000016175	SRP54	87	95.682	Phascolarctos_cinereus
ENSNBRG00000006000	srp54	100	99.318	ENSPFOG00000008870	srp54	87	99.318	Poecilia_formosa
ENSNBRG00000006000	srp54	100	99.318	ENSPLAG00000009889	srp54	87	99.318	Poecilia_latipinna
ENSNBRG00000006000	srp54	100	99.318	ENSPMEG00000008601	srp54	87	99.318	Poecilia_mexicana
ENSNBRG00000006000	srp54	100	99.318	ENSPREG00000004505	srp54	87	99.318	Poecilia_reticulata
ENSNBRG00000006000	srp54	96	95.272	ENSPPYG00000005739	SRP54	84	95.272	Pongo_abelii
ENSNBRG00000006000	srp54	100	91.364	ENSPCAG00000006268	SRP54	87	91.364	Procavia_capensis
ENSNBRG00000006000	srp54	100	93.424	ENSPCOG00000022473	SRP54	87	93.424	Propithecus_coquereli
ENSNBRG00000006000	srp54	58	96.667	ENSPVAG00000010056	SRP54	66	96.667	Pteropus_vampyrus
ENSNBRG00000006000	srp54	100	100.000	ENSPNYG00000009717	srp54	87	100.000	Pundamilia_nyererei
ENSNBRG00000006000	srp54	100	97.955	ENSPNAG00000008544	srp54	87	97.955	Pygocentrus_nattereri
ENSNBRG00000006000	srp54	100	95.682	ENSRNOG00000032776	Srp54a	87	95.682	Rattus_norvegicus
ENSNBRG00000006000	srp54	100	95.682	ENSRROG00000041292	SRP54	97	95.682	Rhinopithecus_roxellana
ENSNBRG00000006000	srp54	82	54.247	YPR088C	SRP54	81	48.655	Saccharomyces_cerevisiae
ENSNBRG00000006000	srp54	100	95.682	ENSSBOG00000035145	SRP54	93	95.682	Saimiri_boliviensis_boliviensis
ENSNBRG00000006000	srp54	78	95.044	ENSSHAG00000000671	SRP54	100	95.044	Sarcophilus_harrisii
ENSNBRG00000006000	srp54	100	98.182	ENSSFOG00015013920	srp54	87	98.182	Scleropages_formosus
ENSNBRG00000006000	srp54	100	92.979	ENSSMAG00000002441	srp54	88	92.979	Scophthalmus_maximus
ENSNBRG00000006000	srp54	100	99.318	ENSSDUG00000018586	srp54	87	99.318	Seriola_dumerili
ENSNBRG00000006000	srp54	100	99.091	ENSSLDG00000010476	srp54	87	99.091	Seriola_lalandi_dorsalis
ENSNBRG00000006000	srp54	100	95.682	ENSSARG00000002744	SRP54	87	95.682	Sorex_araneus
ENSNBRG00000006000	srp54	100	95.682	ENSSPUG00000013101	SRP54	87	95.682	Sphenodon_punctatus
ENSNBRG00000006000	srp54	100	99.545	ENSSPAG00000002354	srp54	87	99.545	Stegastes_partitus
ENSNBRG00000006000	srp54	100	95.682	ENSSSCG00000001955	SRP54	87	95.682	Sus_scrofa
ENSNBRG00000006000	srp54	93	94.878	ENSTGUG00000011945	-	82	94.878	Taeniopygia_guttata
ENSNBRG00000006000	srp54	100	98.864	ENSTRUG00000007057	srp54	87	98.864	Takifugu_rubripes
ENSNBRG00000006000	srp54	100	98.182	ENSTNIG00000002589	srp54	87	98.182	Tetraodon_nigroviridis
ENSNBRG00000006000	srp54	100	87.273	ENSTBEG00000011409	SRP54	98	87.273	Tupaia_belangeri
ENSNBRG00000006000	srp54	100	85.000	ENSTTRG00000000928	SRP54	87	85.000	Tursiops_truncatus
ENSNBRG00000006000	srp54	100	95.682	ENSUMAG00000011234	SRP54	87	95.682	Ursus_maritimus
ENSNBRG00000006000	srp54	93	95.122	ENSVPAG00000005668	SRP54	86	95.122	Vicugna_pacos
ENSNBRG00000006000	srp54	100	95.682	ENSVVUG00000019962	SRP54	87	95.682	Vulpes_vulpes
ENSNBRG00000006000	srp54	100	78.781	ENSXETG00000012290	srp54	88	78.795	Xenopus_tropicalis
ENSNBRG00000006000	srp54	86	99.208	ENSXCOG00000004658	srp54	82	99.208	Xiphophorus_couchianus
ENSNBRG00000006000	srp54	100	99.318	ENSXMAG00000018315	srp54	87	99.318	Xiphophorus_maculatus