EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000006112 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4533 bases
Position: chrJH422545.1:278931-283463
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007831	zf-C2H2	PF00096.26	2.9e-14	1	3
ENSNBRP00000007831	zf-C2H2	PF00096.26	2.9e-14	2	3
ENSNBRP00000007831	zf-C2H2	PF00096.26	2.9e-14	3	3
ENSNBRP00000007831	zf-met	PF12874.7	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008050	-	933	-	ENSNBRP00000007831	310 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000006112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000006112	-	63	48.421	ENSNBRG00000024066	-	96	48.421
ENSNBRG00000006112	-	57	42.529	ENSNBRG00000005805	-	93	42.529
ENSNBRG00000006112	-	55	42.424	ENSNBRG00000003000	-	82	42.424
ENSNBRG00000006112	-	60	50.000	ENSNBRG00000016577	si:dkey-182i3.9	88	50.000
ENSNBRG00000006112	-	53	52.121	ENSNBRG00000013604	-	92	52.121
ENSNBRG00000006112	-	77	46.667	ENSNBRG00000005796	-	93	46.667
ENSNBRG00000006112	-	78	48.980	ENSNBRG00000007384	-	93	48.980
ENSNBRG00000006112	-	61	48.000	ENSNBRG00000024054	-	89	48.000
ENSNBRG00000006112	-	56	46.067	ENSNBRG00000024051	-	66	46.067
ENSNBRG00000006112	-	73	52.083	ENSNBRG00000019481	-	99	52.083
ENSNBRG00000006112	-	71	52.525	ENSNBRG00000021375	-	78	52.525
ENSNBRG00000006112	-	57	56.842	ENSNBRG00000015873	-	98	58.333
ENSNBRG00000006112	-	64	54.167	ENSNBRG00000024086	-	85	54.167
ENSNBRG00000006112	-	57	47.778	ENSNBRG00000004557	-	60	47.778
ENSNBRG00000006112	-	73	60.638	ENSNBRG00000003124	-	99	68.966
ENSNBRG00000006112	-	70	65.217	ENSNBRG00000004822	-	87	65.217
ENSNBRG00000006112	-	69	65.217	ENSNBRG00000000523	-	95	65.217
ENSNBRG00000006112	-	64	48.000	ENSNBRG00000004792	-	77	48.000
ENSNBRG00000006112	-	70	46.809	ENSNBRG00000010987	-	88	46.753
ENSNBRG00000006112	-	57	42.857	ENSNBRG00000001608	-	93	42.857
ENSNBRG00000006112	-	69	41.772	ENSNBRG00000001813	-	74	41.772
ENSNBRG00000006112	-	69	41.346	ENSNBRG00000004523	-	93	40.777
ENSNBRG00000006112	-	50	47.541	ENSNBRG00000009075	znf236	87	32.000
ENSNBRG00000006112	-	58	56.180	ENSNBRG00000015652	-	88	56.180
ENSNBRG00000006112	-	54	50.000	ENSNBRG00000013501	-	98	50.000
ENSNBRG00000006112	-	57	56.250	ENSNBRG00000024354	-	92	56.250
ENSNBRG00000006112	-	55	48.315	ENSNBRG00000008106	-	92	48.315
ENSNBRG00000006112	-	54	50.000	ENSNBRG00000004723	-	83	50.000
ENSNBRG00000006112	-	69	60.000	ENSNBRG00000016169	-	91	60.000
ENSNBRG00000006112	-	63	40.698	ENSNBRG00000018141	-	70	40.698
ENSNBRG00000006112	-	65	53.846	ENSNBRG00000014088	-	99	57.971
ENSNBRG00000006112	-	67	59.375	ENSNBRG00000000960	-	99	57.732
ENSNBRG00000006112	-	65	51.042	ENSNBRG00000024014	-	99	51.042
ENSNBRG00000006112	-	56	58.333	ENSNBRG00000007311	-	91	58.333
ENSNBRG00000006112	-	65	54.737	ENSNBRG00000000577	-	98	56.383
ENSNBRG00000006112	-	77	69.748	ENSNBRG00000006757	-	93	65.986
ENSNBRG00000006112	-	67	54.867	ENSNBRG00000001163	-	99	57.292
ENSNBRG00000006112	-	56	43.478	ENSNBRG00000016564	-	74	43.478
ENSNBRG00000006112	-	53	54.255	ENSNBRG00000013583	-	90	54.255
ENSNBRG00000006112	-	58	61.458	ENSNBRG00000000492	-	95	61.458
ENSNBRG00000006112	-	55	49.206	ENSNBRG00000008123	-	78	49.206
ENSNBRG00000006112	-	58	44.944	ENSNBRG00000005823	-	79	44.944
ENSNBRG00000006112	-	56	48.454	ENSNBRG00000016666	-	98	50.000
ENSNBRG00000006112	-	59	52.747	ENSNBRG00000023229	-	94	52.747
ENSNBRG00000006112	-	61	51.899	ENSNBRG00000010194	-	98	51.899
ENSNBRG00000006112	-	54	46.316	ENSNBRG00000016550	-	88	46.316
ENSNBRG00000006112	-	63	58.065	ENSNBRG00000024345	-	95	58.065
ENSNBRG00000006112	-	55	52.632	ENSNBRG00000024344	-	86	52.632
ENSNBRG00000006112	-	75	48.315	ENSNBRG00000002902	-	97	53.425
ENSNBRG00000006112	-	63	58.947	ENSNBRG00000016234	-	94	58.947
ENSNBRG00000006112	-	55	57.143	ENSNBRG00000006411	-	85	57.143
ENSNBRG00000006112	-	73	53.333	ENSNBRG00000016282	-	98	53.333
ENSNBRG00000006112	-	58	40.625	ENSNBRG00000009815	-	74	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006112	-	69	49.474	ENSAPOG00000019138	-	85	49.474	Acanthochromis_polyacanthus
ENSNBRG00000006112	-	57	55.882	ENSAPOG00000018429	-	73	55.882	Acanthochromis_polyacanthus
ENSNBRG00000006112	-	63	45.946	ENSACIG00000007464	-	81	45.946	Amphilophus_citrinellus
ENSNBRG00000006112	-	75	44.762	ENSAOCG00000016897	-	85	44.762	Amphiprion_ocellaris
ENSNBRG00000006112	-	75	44.762	ENSAPEG00000001556	-	93	44.762	Amphiprion_percula
ENSNBRG00000006112	-	60	49.495	ENSAPEG00000018762	-	67	49.495	Amphiprion_percula
ENSNBRG00000006112	-	65	50.562	ENSCSEG00000010453	-	85	50.562	Cynoglossus_semilaevis
ENSNBRG00000006112	-	71	43.333	ENSCVAG00000006484	-	81	43.333	Cyprinodon_variegatus
ENSNBRG00000006112	-	61	51.429	ENSCVAG00000015616	-	94	51.429	Cyprinodon_variegatus
ENSNBRG00000006112	-	60	37.766	ENSCVAG00000006653	-	86	42.708	Cyprinodon_variegatus
ENSNBRG00000006112	-	61	51.087	ENSELUG00000012088	-	78	51.087	Esox_lucius
ENSNBRG00000006112	-	60	48.421	ENSFHEG00000023184	-	76	48.421	Fundulus_heteroclitus
ENSNBRG00000006112	-	69	34.082	ENSGAFG00000011998	-	68	34.082	Gambusia_affinis
ENSNBRG00000006112	-	69	35.088	ENSGAFG00000012545	-	71	35.088	Gambusia_affinis
ENSNBRG00000006112	-	63	52.688	ENSGAFG00000008204	-	89	52.688	Gambusia_affinis
ENSNBRG00000006112	-	62	38.889	ENSGAFG00000001879	-	86	38.889	Gambusia_affinis
ENSNBRG00000006112	-	69	42.169	ENSHCOG00000008227	-	80	42.169	Hippocampus_comes
ENSNBRG00000006112	-	70	48.980	ENSHCOG00000008213	-	81	48.980	Hippocampus_comes
ENSNBRG00000006112	-	66	45.098	ENSHCOG00000015497	-	90	45.098	Hippocampus_comes
ENSNBRG00000006112	-	60	48.315	ENSHCOG00000013489	-	94	53.061	Hippocampus_comes
ENSNBRG00000006112	-	67	44.681	ENSHCOG00000019389	-	77	44.681	Hippocampus_comes
ENSNBRG00000006112	-	53	45.977	ENSLBEG00000006161	-	81	45.977	Labrus_bergylta
ENSNBRG00000006112	-	77	48.438	ENSLBEG00000001132	-	62	48.438	Labrus_bergylta
ENSNBRG00000006112	-	63	43.750	ENSLBEG00000011210	-	74	43.750	Labrus_bergylta
ENSNBRG00000006112	-	62	36.449	ENSMMOG00000017592	-	69	36.508	Mola_mola
ENSNBRG00000006112	-	68	43.284	ENSORLG00000002268	-	81	43.284	Oryzias_latipes
ENSNBRG00000006112	-	57	39.175	ENSORLG00020019227	-	73	43.750	Oryzias_latipes_hni
ENSNBRG00000006112	-	61	44.545	ENSORLG00020018921	-	94	50.000	Oryzias_latipes_hni
ENSNBRG00000006112	-	54	45.192	ENSORLG00015018099	-	95	45.192	Oryzias_latipes_hsok
ENSNBRG00000006112	-	60	43.939	ENSOMEG00000019114	-	67	42.781	Oryzias_melastigma
ENSNBRG00000006112	-	60	48.958	ENSPMGG00000002659	-	52	48.958	Periophthalmus_magnuspinnatus
ENSNBRG00000006112	-	53	46.316	ENSPMGG00000002455	-	85	46.316	Periophthalmus_magnuspinnatus
ENSNBRG00000006112	-	67	44.495	ENSPFOG00000009491	-	82	44.495	Poecilia_formosa
ENSNBRG00000006112	-	51	40.909	ENSPLAG00000014832	-	83	40.909	Poecilia_latipinna
ENSNBRG00000006112	-	73	52.632	ENSPLAG00000010067	-	99	52.632	Poecilia_latipinna
ENSNBRG00000006112	-	60	39.796	ENSPMEG00000002953	-	76	39.796	Poecilia_mexicana
ENSNBRG00000006112	-	51	40.909	ENSPMEG00000005210	-	83	40.909	Poecilia_mexicana
ENSNBRG00000006112	-	70	45.902	ENSPMEG00000024117	-	82	44.495	Poecilia_mexicana
ENSNBRG00000006112	-	70	31.132	ENSPREG00000008907	-	70	31.132	Poecilia_reticulata
ENSNBRG00000006112	-	61	42.079	ENSSDUG00000020774	-	74	42.079	Seriola_dumerili
ENSNBRG00000006112	-	50	56.667	ENSXETG00000012506	znf91	99	56.667	Xenopus_tropicalis
ENSNBRG00000006112	-	65	43.820	ENSXCOG00000003441	-	84	42.697	Xiphophorus_couchianus
ENSNBRG00000006112	-	81	34.586	ENSXMAG00000022657	-	89	34.586	Xiphophorus_maculatus