EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000006179 (Gene tree)
Gene ID: 102793812
Gene Symbol: rbck1
Alias: zgc:91964
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7261 bases
Position: chrJH422277.1:2084764-2092024
Accession: 102793812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007966	zf-RanBP	PF00641.18	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008190	-	1443	XM_006782768	ENSNBRP00000007966	480 (aa)	XP_006782831	-

Gene Model

Click here to download ENSNBRG00000006179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000006179	rbck1	89	42.825	ENSNBRG00000002270	shrprbck1r	65	41.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006179	rbck1	91	96.101	ENSACLG00000020380	rbck1	84	96.101	Astatotilapia_calliptera
ENSNBRG00000006179	rbck1	99	52.174	ENSAMXG00000004941	rbck1	91	52.058	Astyanax_mexicanus
ENSNBRG00000006179	rbck1	90	73.563	ENSCVAG00000002649	rbck1	84	74.253	Cyprinodon_variegatus
ENSNBRG00000006179	rbck1	99	57.764	ENSELUG00000022786	rbck1	89	57.557	Esox_lucius
ENSNBRG00000006179	rbck1	90	75.862	ENSFHEG00000016918	rbck1	83	75.402	Fundulus_heteroclitus
ENSNBRG00000006179	rbck1	91	95.872	ENSHBUG00000008208	rbck1	84	95.872	Haplochromis_burtoni
ENSNBRG00000006179	rbck1	91	96.330	ENSMZEG00005005317	rbck1	84	96.330	Maylandia_zebra
ENSNBRG00000006179	rbck1	90	96.536	ENSONIG00000006803	rbck1	96	95.522	Oreochromis_niloticus
ENSNBRG00000006179	rbck1	91	95.890	ENSPNYG00000012666	rbck1	85	95.890	Pundamilia_nyererei
ENSNBRG00000006179	rbck1	90	78.182	ENSSDUG00000023631	rbck1	84	78.458	Seriola_dumerili
ENSNBRG00000006179	rbck1	90	78.132	ENSSLDG00000008305	rbck1	84	77.551	Seriola_lalandi_dorsalis
ENSNBRG00000006179	rbck1	90	78.409	ENSSPAG00000009432	rbck1	84	78.054	Stegastes_partitus