EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000006202 (Gene tree)
Gene ID: 102794543
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7910 bases
Position: chrJH422351.1:2205182-2213091
Accession: 102794543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000007971	MMR_HSR1	PF01926.23	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008192	-	639	XM_006801236	ENSNBRP00000007971	212 (aa)	XP_006801299	-

Gene Model

Click here to download ENSNBRG00000006202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000006202	zgc:171927	77	44.785	ENSNBRG00000018165	rab5c	80	43.333
ENSNBRG00000006202	zgc:171927	74	34.591	ENSNBRG00000000489	rabl2	68	34.591
ENSNBRG00000006202	zgc:171927	76	41.916	ENSNBRG00000022235	rab33a	70	41.916
ENSNBRG00000006202	zgc:171927	73	35.849	ENSNBRG00000024340	RAB9A	74	35.849
ENSNBRG00000006202	zgc:171927	55	30.508	ENSNBRG00000018737	arl8ba	61	30.508
ENSNBRG00000006202	zgc:171927	80	49.704	ENSNBRG00000001056	rab15	79	49.704
ENSNBRG00000006202	zgc:171927	76	63.354	ENSNBRG00000008930	si:dkey-16l2.16	90	56.842
ENSNBRG00000006202	zgc:171927	98	42.308	ENSNBRG00000011607	rab25a	95	42.308
ENSNBRG00000006202	zgc:171927	78	51.807	ENSNBRG00000023898	rab11ba	64	51.807
ENSNBRG00000006202	zgc:171927	90	43.158	ENSNBRG00000005542	-	87	43.158
ENSNBRG00000006202	zgc:171927	80	36.364	ENSNBRG00000008714	RAB29	76	36.364
ENSNBRG00000006202	zgc:171927	87	37.297	ENSNBRG00000022702	rab41	84	37.297
ENSNBRG00000006202	zgc:171927	76	50.617	ENSNBRG00000013507	rab18a	79	50.617
ENSNBRG00000006202	zgc:171927	78	41.279	ENSNBRG00000017996	-	74	41.279
ENSNBRG00000006202	zgc:171927	77	38.788	ENSNBRG00000004403	kras	91	38.150
ENSNBRG00000006202	zgc:171927	87	37.297	ENSNBRG00000013673	rab6ba	85	37.297
ENSNBRG00000006202	zgc:171927	55	30.508	ENSNBRG00000023542	arl8bb	61	30.508
ENSNBRG00000006202	zgc:171927	56	47.899	ENSNBRG00000011872	-	59	47.899
ENSNBRG00000006202	zgc:171927	78	51.205	ENSNBRG00000000372	rab11bb	76	51.205
ENSNBRG00000006202	zgc:171927	96	35.545	ENSNBRG00000019750	rab34a	79	35.545
ENSNBRG00000006202	zgc:171927	78	47.399	ENSNBRG00000002684	zgc:101559	74	47.399
ENSNBRG00000006202	zgc:171927	50	38.679	ENSNBRG00000002346	RAP2B	89	38.983
ENSNBRG00000006202	zgc:171927	82	30.811	ENSNBRG00000011713	rasl11a	70	30.811
ENSNBRG00000006202	zgc:171927	94	52.261	ENSNBRG00000004124	rab13	100	52.261
ENSNBRG00000006202	zgc:171927	85	32.240	ENSNBRG00000013795	rheb	94	32.240
ENSNBRG00000006202	zgc:171927	79	49.701	ENSNBRG00000001241	rab2a	79	49.701
ENSNBRG00000006202	zgc:171927	78	51.205	ENSNBRG00000023885	-	76	51.205
ENSNBRG00000006202	zgc:171927	78	44.311	ENSNBRG00000021487	rab42a	63	44.311
ENSNBRG00000006202	zgc:171927	74	36.709	ENSNBRG00000013691	rab23	83	36.471
ENSNBRG00000006202	zgc:171927	100	34.722	ENSNBRG00000002772	-	99	34.722
ENSNBRG00000006202	zgc:171927	81	45.143	ENSNBRG00000002778	RAB15	83	45.143
ENSNBRG00000006202	zgc:171927	83	45.455	ENSNBRG00000011763	rab5aa	81	45.455
ENSNBRG00000006202	zgc:171927	80	32.941	ENSNBRG00000016978	rhebl1	91	32.941
ENSNBRG00000006202	zgc:171927	85	43.646	ENSNBRG00000002726	-	83	43.646
ENSNBRG00000006202	zgc:171927	78	53.614	ENSNBRG00000012893	rab11a	77	53.614
ENSNBRG00000006202	zgc:171927	97	32.243	ENSNBRG00000007544	rab32b	92	32.243
ENSNBRG00000006202	zgc:171927	77	44.242	ENSNBRG00000018106	-	77	44.242
ENSNBRG00000006202	zgc:171927	96	36.275	ENSNBRG00000016716	rab6a	94	36.275
ENSNBRG00000006202	zgc:171927	55	32.203	ENSNBRG00000010663	arl8a	61	32.203
ENSNBRG00000006202	zgc:171927	72	40.789	ENSNBRG00000015905	rab6bb	76	40.789
ENSNBRG00000006202	zgc:171927	78	35.119	ENSNBRG00000014613	si:ch73-116o1.2	80	35.119
ENSNBRG00000006202	zgc:171927	85	43.094	ENSNBRG00000016922	-	80	43.094
ENSNBRG00000006202	zgc:171927	83	46.629	ENSNBRG00000014428	rab12	73	46.629
ENSNBRG00000006202	zgc:171927	81	38.636	ENSNBRG00000021829	RAB7A	85	38.636
ENSNBRG00000006202	zgc:171927	76	50.000	ENSNBRG00000008137	rab18b	79	50.000
ENSNBRG00000006202	zgc:171927	77	44.242	ENSNBRG00000005082	RAB39B	77	44.242
ENSNBRG00000006202	zgc:171927	98	44.444	ENSNBRG00000005116	rab11al	95	44.444
ENSNBRG00000006202	zgc:171927	100	71.698	ENSNBRG00000003873	rab1ba	100	71.698
ENSNBRG00000006202	zgc:171927	75	39.506	ENSNBRG00000023214	si:dkey-13a21.4	78	39.506
ENSNBRG00000006202	zgc:171927	81	37.143	ENSNBRG00000013940	rab9b	77	37.143
ENSNBRG00000006202	zgc:171927	98	45.894	ENSNBRG00000002082	rab30	89	45.894
ENSNBRG00000006202	zgc:171927	93	77.157	ENSNBRG00000020492	-	96	77.157
ENSNBRG00000006202	zgc:171927	76	42.857	ENSNBRG00000007077	rab33ba	71	41.758
ENSNBRG00000006202	zgc:171927	79	36.842	ENSNBRG00000002825	-	82	36.842
ENSNBRG00000006202	zgc:171927	81	37.791	ENSNBRG00000017793	RAB17	76	37.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006202	zgc:171927	100	93.925	ENSAPOG00000004980	-	100	93.925	Acanthochromis_polyacanthus
ENSNBRG00000006202	zgc:171927	100	96.262	ENSACIG00000009006	zgc:171927	100	96.262	Amphilophus_citrinellus
ENSNBRG00000006202	zgc:171927	100	91.589	ENSAOCG00000024149	-	100	91.589	Amphiprion_ocellaris
ENSNBRG00000006202	zgc:171927	71	88.387	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSNBRG00000006202	zgc:171927	100	92.056	ENSAPEG00000022171	zgc:171927	99	92.056	Amphiprion_percula
ENSNBRG00000006202	zgc:171927	100	93.458	ENSATEG00000003430	zgc:171927	100	93.458	Anabas_testudineus
ENSNBRG00000006202	zgc:171927	100	98.585	ENSACLG00000013734	-	100	98.585	Astatotilapia_calliptera
ENSNBRG00000006202	zgc:171927	100	79.343	ENSAMXG00000039486	zgc:171927	100	79.343	Astyanax_mexicanus
ENSNBRG00000006202	zgc:171927	100	89.720	ENSCSEG00000014416	zgc:171927	100	89.720	Cynoglossus_semilaevis
ENSNBRG00000006202	zgc:171927	100	91.121	ENSCVAG00000009222	zgc:171927	100	91.121	Cyprinodon_variegatus
ENSNBRG00000006202	zgc:171927	100	78.404	ENSDARG00000033056	zgc:171927	100	78.404	Danio_rerio
ENSNBRG00000006202	zgc:171927	100	78.972	ENSELUG00000011680	zgc:171927	100	78.972	Esox_lucius
ENSNBRG00000006202	zgc:171927	100	92.523	ENSFHEG00000022176	zgc:171927	100	92.523	Fundulus_heteroclitus
ENSNBRG00000006202	zgc:171927	98	82.297	ENSGMOG00000004979	-	97	82.297	Gadus_morhua
ENSNBRG00000006202	zgc:171927	100	90.783	ENSGAFG00000015702	zgc:171927	87	90.783	Gambusia_affinis
ENSNBRG00000006202	zgc:171927	100	92.056	ENSGACG00000013401	zgc:171927	99	92.056	Gasterosteus_aculeatus
ENSNBRG00000006202	zgc:171927	100	98.585	ENSHBUG00000002397	-	100	98.585	Haplochromis_burtoni
ENSNBRG00000006202	zgc:171927	100	92.056	ENSKMAG00000009856	zgc:171927	100	92.056	Kryptolebias_marmoratus
ENSNBRG00000006202	zgc:171927	98	90.909	ENSLBEG00000027226	-	89	90.909	Labrus_bergylta
ENSNBRG00000006202	zgc:171927	100	90.654	ENSLBEG00000005791	-	100	90.654	Labrus_bergylta
ENSNBRG00000006202	zgc:171927	98	73.558	ENSLOCG00000014692	zgc:171927	96	73.558	Lepisosteus_oculatus
ENSNBRG00000006202	zgc:171927	100	92.523	ENSMAMG00000020135	zgc:171927	100	92.523	Mastacembelus_armatus
ENSNBRG00000006202	zgc:171927	100	98.585	ENSMZEG00005024685	-	100	98.585	Maylandia_zebra
ENSNBRG00000006202	zgc:171927	100	88.785	ENSMMOG00000009833	-	100	88.785	Mola_mola
ENSNBRG00000006202	zgc:171927	100	91.509	ENSMALG00000021129	zgc:171927	100	91.509	Monopterus_albus
ENSNBRG00000006202	zgc:171927	100	89.671	ENSORLG00000000602	zgc:171927	100	89.671	Oryzias_latipes
ENSNBRG00000006202	zgc:171927	100	89.671	ENSORLG00020021071	zgc:171927	100	89.671	Oryzias_latipes_hni
ENSNBRG00000006202	zgc:171927	100	89.671	ENSORLG00015010098	zgc:171927	100	89.671	Oryzias_latipes_hsok
ENSNBRG00000006202	zgc:171927	100	90.187	ENSOMEG00000020594	zgc:171927	100	90.187	Oryzias_melastigma
ENSNBRG00000006202	zgc:171927	100	92.523	ENSPFOG00000013810	zgc:171927	99	92.523	Poecilia_formosa
ENSNBRG00000006202	zgc:171927	100	91.589	ENSPLAG00000005869	zgc:171927	100	91.589	Poecilia_latipinna
ENSNBRG00000006202	zgc:171927	100	92.523	ENSPMEG00000022350	zgc:171927	100	92.523	Poecilia_mexicana
ENSNBRG00000006202	zgc:171927	100	93.458	ENSPREG00000017517	zgc:171927	100	93.458	Poecilia_reticulata
ENSNBRG00000006202	zgc:171927	100	98.585	ENSPNYG00000007520	-	100	98.585	Pundamilia_nyererei
ENSNBRG00000006202	zgc:171927	100	79.343	ENSPNAG00000029574	zgc:171927	100	79.343	Pygocentrus_nattereri
ENSNBRG00000006202	zgc:171927	100	77.465	ENSSFOG00015005464	zgc:171927	99	77.465	Scleropages_formosus
ENSNBRG00000006202	zgc:171927	100	88.318	ENSSMAG00000004416	-	100	88.318	Scophthalmus_maximus
ENSNBRG00000006202	zgc:171927	100	95.794	ENSSDUG00000004445	zgc:171927	100	95.794	Seriola_dumerili
ENSNBRG00000006202	zgc:171927	100	95.794	ENSSLDG00000018024	zgc:171927	100	95.794	Seriola_lalandi_dorsalis
ENSNBRG00000006202	zgc:171927	100	93.925	ENSSPAG00000013533	zgc:171927	100	93.925	Stegastes_partitus
ENSNBRG00000006202	zgc:171927	100	93.458	ENSXCOG00000010695	zgc:171927	100	93.458	Xiphophorus_couchianus
ENSNBRG00000006202	zgc:171927	100	93.925	ENSXMAG00000004683	zgc:171927	100	93.925	Xiphophorus_maculatus