EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006266 (Gene tree)
Gene ID: 102787455
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: protein LSM12 homolog A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 10256 bases
Position: chrJH422292.1:548660-558915
Accession: 102787455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008034	AD	PF09793.9	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008257	-	2117	XM_006790924	ENSNBRP00000008034	196 (aa)	XP_006790987	UPI00022B43EC

Gene Model

Click here to download ENSNBRG00000006266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006266	lsm12b	100	84.694	ENSG00000161654	LSM12	100	84.694	Homo_sapiens
ENSNBRG00000006266	lsm12b	100	97.959	ENSAPOG00000007907	lsm12b	100	97.959	Acanthochromis_polyacanthus
ENSNBRG00000006266	lsm12b	100	82.915	ENSAMEG00000018321	LSM12	100	82.915	Ailuropoda_melanoleuca
ENSNBRG00000006266	lsm12b	100	99.490	ENSACIG00000008538	lsm12b	100	99.490	Amphilophus_citrinellus
ENSNBRG00000006266	lsm12b	100	98.469	ENSAOCG00000021847	lsm12b	88	98.469	Amphiprion_ocellaris
ENSNBRG00000006266	lsm12b	100	98.469	ENSAPEG00000002252	lsm12b	100	98.469	Amphiprion_percula
ENSNBRG00000006266	lsm12b	100	96.939	ENSATEG00000005705	lsm12b	100	96.939	Anabas_testudineus
ENSNBRG00000006266	lsm12b	100	83.673	ENSACAG00000004618	LSM12	100	83.673	Anolis_carolinensis
ENSNBRG00000006266	lsm12b	100	84.694	ENSANAG00000029011	LSM12	100	84.694	Aotus_nancymaae
ENSNBRG00000006266	lsm12b	100	100.000	ENSACLG00000026332	lsm12b	100	100.000	Astatotilapia_calliptera
ENSNBRG00000006266	lsm12b	100	85.714	ENSAMXG00000036117	lsm12a	91	85.714	Astyanax_mexicanus
ENSNBRG00000006266	lsm12b	100	92.857	ENSAMXG00000032952	lsm12b	100	92.857	Astyanax_mexicanus
ENSNBRG00000006266	lsm12b	100	84.694	ENSBTAG00000016252	LSM12	100	84.694	Bos_taurus
ENSNBRG00000006266	lsm12b	100	84.694	ENSCJAG00000048480	LSM12	100	84.694	Callithrix_jacchus
ENSNBRG00000006266	lsm12b	100	84.694	ENSCAFG00000014379	LSM12	92	84.694	Canis_familiaris
ENSNBRG00000006266	lsm12b	100	84.694	ENSCAFG00020012173	LSM12	100	84.694	Canis_lupus_dingo
ENSNBRG00000006266	lsm12b	100	84.694	ENSCHIG00000018175	LSM12	100	84.694	Capra_hircus
ENSNBRG00000006266	lsm12b	100	84.694	ENSTSYG00000036361	LSM12	100	84.694	Carlito_syrichta
ENSNBRG00000006266	lsm12b	83	80.864	ENSCAPG00000009647	LSM12	89	80.864	Cavia_aperea
ENSNBRG00000006266	lsm12b	100	83.673	ENSCPOG00000012860	LSM12	100	83.673	Cavia_porcellus
ENSNBRG00000006266	lsm12b	100	84.694	ENSCCAG00000032905	LSM12	100	84.694	Cebus_capucinus
ENSNBRG00000006266	lsm12b	100	84.694	ENSCATG00000030577	-	100	84.694	Cercocebus_atys
ENSNBRG00000006266	lsm12b	100	84.184	ENSCLAG00000015759	LSM12	100	84.184	Chinchilla_lanigera
ENSNBRG00000006266	lsm12b	100	85.204	ENSCSAG00000003486	LSM12	100	85.204	Chlorocebus_sabaeus
ENSNBRG00000006266	lsm12b	56	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSNBRG00000006266	lsm12b	100	85.204	ENSCPBG00000027105	LSM12	100	85.204	Chrysemys_picta_bellii
ENSNBRG00000006266	lsm12b	100	84.694	ENSCANG00000043328	LSM12	100	84.694	Colobus_angolensis_palliatus
ENSNBRG00000006266	lsm12b	100	84.694	ENSCGRG00001002094	Lsm12	100	84.694	Cricetulus_griseus_chok1gshd
ENSNBRG00000006266	lsm12b	89	77.011	ENSCGRG00000004316	Lsm12	98	77.011	Cricetulus_griseus_crigri
ENSNBRG00000006266	lsm12b	100	97.449	ENSCSEG00000008434	lsm12b	100	97.449	Cynoglossus_semilaevis
ENSNBRG00000006266	lsm12b	100	96.429	ENSCVAG00000008755	lsm12b	100	96.429	Cyprinodon_variegatus
ENSNBRG00000006266	lsm12b	100	93.878	ENSDARG00000109510	lsm12b	100	93.878	Danio_rerio
ENSNBRG00000006266	lsm12b	100	85.714	ENSDARG00000028848	lsm12a	100	85.714	Danio_rerio
ENSNBRG00000006266	lsm12b	100	84.694	ENSDNOG00000002418	LSM12	91	84.694	Dasypus_novemcinctus
ENSNBRG00000006266	lsm12b	100	84.694	ENSDORG00000016381	Lsm12	100	84.694	Dipodomys_ordii
ENSNBRG00000006266	lsm12b	73	32.278	FBgn0036057	CG14164	83	32.278	Drosophila_melanogaster
ENSNBRG00000006266	lsm12b	83	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSNBRG00000006266	lsm12b	88	75.723	ENSETEG00000011012	-	99	75.723	Echinops_telfairi
ENSNBRG00000006266	lsm12b	100	84.184	ENSETEG00000008374	LSM12	100	84.184	Echinops_telfairi
ENSNBRG00000006266	lsm12b	85	65.868	ENSEBUG00000016299	lsm12a	92	65.868	Eptatretus_burgeri
ENSNBRG00000006266	lsm12b	100	84.694	ENSEASG00005010155	LSM12	100	84.694	Equus_asinus_asinus
ENSNBRG00000006266	lsm12b	100	84.694	ENSECAG00000009071	LSM12	100	84.694	Equus_caballus
ENSNBRG00000006266	lsm12b	78	84.967	ENSEEUG00000002419	-	100	84.967	Erinaceus_europaeus
ENSNBRG00000006266	lsm12b	100	93.878	ENSELUG00000015538	lsm12b	100	89.286	Esox_lucius
ENSNBRG00000006266	lsm12b	100	91.327	ENSELUG00000000256	-	100	91.327	Esox_lucius
ENSNBRG00000006266	lsm12b	100	84.694	ENSFCAG00000037021	LSM12	100	84.694	Felis_catus
ENSNBRG00000006266	lsm12b	80	81.410	ENSFDAG00000008954	LSM12	91	81.410	Fukomys_damarensis
ENSNBRG00000006266	lsm12b	100	96.429	ENSFHEG00000019913	lsm12b	100	96.429	Fundulus_heteroclitus
ENSNBRG00000006266	lsm12b	81	98.101	ENSGMOG00000015449	lsm12b	100	98.101	Gadus_morhua
ENSNBRG00000006266	lsm12b	78	85.621	ENSGALG00000039803	LSM12	100	85.621	Gallus_gallus
ENSNBRG00000006266	lsm12b	100	96.429	ENSGAFG00000011829	lsm12b	100	96.429	Gambusia_affinis
ENSNBRG00000006266	lsm12b	81	98.734	ENSGACG00000003428	lsm12b	100	98.734	Gasterosteus_aculeatus
ENSNBRG00000006266	lsm12b	100	84.184	ENSGAGG00000021965	LSM12	100	84.184	Gopherus_agassizii
ENSNBRG00000006266	lsm12b	100	84.694	ENSGGOG00000010589	-	100	84.694	Gorilla_gorilla
ENSNBRG00000006266	lsm12b	85	100.000	ENSHBUG00000007667	lsm12b	74	100.000	Haplochromis_burtoni
ENSNBRG00000006266	lsm12b	100	84.694	ENSHGLG00000011411	LSM12	100	84.694	Heterocephalus_glaber_female
ENSNBRG00000006266	lsm12b	79	84.416	ENSHGLG00100000241	LSM12	82	84.416	Heterocephalus_glaber_male
ENSNBRG00000006266	lsm12b	100	94.388	ENSHCOG00000002094	lsm12b	100	94.388	Hippocampus_comes
ENSNBRG00000006266	lsm12b	99	83.505	ENSIPUG00000008936	lsm12a	99	83.505	Ictalurus_punctatus
ENSNBRG00000006266	lsm12b	100	93.367	ENSIPUG00000014800	lsm12	100	93.367	Ictalurus_punctatus
ENSNBRG00000006266	lsm12b	100	84.694	ENSSTOG00000007403	LSM12	100	84.694	Ictidomys_tridecemlineatus
ENSNBRG00000006266	lsm12b	96	75.789	ENSJJAG00000011793	-	100	75.789	Jaculus_jaculus
ENSNBRG00000006266	lsm12b	76	75.168	ENSJJAG00000014652	-	89	75.168	Jaculus_jaculus
ENSNBRG00000006266	lsm12b	100	83.673	ENSJJAG00000004364	-	100	84.545	Jaculus_jaculus
ENSNBRG00000006266	lsm12b	85	95.808	ENSKMAG00000007704	lsm12b	56	95.808	Kryptolebias_marmoratus
ENSNBRG00000006266	lsm12b	100	97.959	ENSLBEG00000027999	lsm12b	100	97.959	Labrus_bergylta
ENSNBRG00000006266	lsm12b	100	87.755	ENSLACG00000015981	LSM12	100	87.755	Latimeria_chalumnae
ENSNBRG00000006266	lsm12b	100	92.347	ENSLOCG00000013079	lsm12b	99	92.347	Lepisosteus_oculatus
ENSNBRG00000006266	lsm12b	100	84.694	ENSLAFG00000005202	LSM12	100	84.694	Loxodonta_africana
ENSNBRG00000006266	lsm12b	100	84.694	ENSMFAG00000031376	LSM12	100	84.694	Macaca_fascicularis
ENSNBRG00000006266	lsm12b	65	73.563	ENSMMUG00000042106	-	100	73.563	Macaca_mulatta
ENSNBRG00000006266	lsm12b	100	84.694	ENSMMUG00000006804	LSM12	100	84.694	Macaca_mulatta
ENSNBRG00000006266	lsm12b	100	84.694	ENSMNEG00000030594	-	100	84.694	Macaca_nemestrina
ENSNBRG00000006266	lsm12b	100	84.694	ENSMLEG00000039934	LSM12	100	84.694	Mandrillus_leucophaeus
ENSNBRG00000006266	lsm12b	100	97.959	ENSMAMG00000004279	lsm12b	100	97.959	Mastacembelus_armatus
ENSNBRG00000006266	lsm12b	100	100.000	ENSMZEG00005005754	lsm12b	100	100.000	Maylandia_zebra
ENSNBRG00000006266	lsm12b	100	85.204	ENSMICG00000037219	LSM12	100	85.204	Microcebus_murinus
ENSNBRG00000006266	lsm12b	100	72.449	ENSMOCG00000017015	-	86	72.449	Microtus_ochrogaster
ENSNBRG00000006266	lsm12b	100	84.694	ENSMOCG00000019878	-	100	84.694	Microtus_ochrogaster
ENSNBRG00000006266	lsm12b	100	97.959	ENSMMOG00000020848	lsm12b	100	97.959	Mola_mola
ENSNBRG00000006266	lsm12b	100	97.959	ENSMALG00000007578	lsm12b	100	97.959	Monopterus_albus
ENSNBRG00000006266	lsm12b	100	84.184	MGP_CAROLIEiJ_G0017241	Lsm12	100	84.184	Mus_caroli
ENSNBRG00000006266	lsm12b	100	84.694	ENSMUSG00000020922	Lsm12	100	84.694	Mus_musculus
ENSNBRG00000006266	lsm12b	100	77.934	MGP_PahariEiJ_G0018371	Lsm12	100	77.934	Mus_pahari
ENSNBRG00000006266	lsm12b	100	84.184	MGP_SPRETEiJ_G0018084	Lsm12	100	84.184	Mus_spretus
ENSNBRG00000006266	lsm12b	100	85.204	ENSMLUG00000006391	LSM12	100	85.204	Myotis_lucifugus
ENSNBRG00000006266	lsm12b	100	84.694	ENSNGAG00000001870	Lsm12	100	84.694	Nannospalax_galili
ENSNBRG00000006266	lsm12b	100	58.621	ENSNGAG00000015429	-	100	58.621	Nannospalax_galili
ENSNBRG00000006266	lsm12b	100	84.694	ENSNLEG00000005580	-	100	84.694	Nomascus_leucogenys
ENSNBRG00000006266	lsm12b	85	84.337	ENSMEUG00000007501	-	100	84.337	Notamacropus_eugenii
ENSNBRG00000006266	lsm12b	100	84.694	ENSOPRG00000008552	LSM12	100	84.694	Ochotona_princeps
ENSNBRG00000006266	lsm12b	100	77.041	ENSODEG00000007886	-	74	77.041	Octodon_degus
ENSNBRG00000006266	lsm12b	99	84.536	ENSODEG00000017998	-	99	84.536	Octodon_degus
ENSNBRG00000006266	lsm12b	100	100.000	ENSONIG00000007933	lsm12b	100	100.000	Oreochromis_niloticus
ENSNBRG00000006266	lsm12b	99	79.487	ENSOCUG00000027889	-	100	79.487	Oryctolagus_cuniculus
ENSNBRG00000006266	lsm12b	99	78.462	ENSOCUG00000024823	-	100	78.462	Oryctolagus_cuniculus
ENSNBRG00000006266	lsm12b	99	79.487	ENSOCUG00000021254	-	100	79.487	Oryctolagus_cuniculus
ENSNBRG00000006266	lsm12b	100	82.915	ENSOCUG00000008566	-	100	82.915	Oryctolagus_cuniculus
ENSNBRG00000006266	lsm12b	100	97.449	ENSORLG00000011310	lsm12b	100	97.449	Oryzias_latipes
ENSNBRG00000006266	lsm12b	100	97.449	ENSORLG00020002060	lsm12b	92	97.449	Oryzias_latipes_hni
ENSNBRG00000006266	lsm12b	100	97.449	ENSORLG00015001647	lsm12b	92	97.449	Oryzias_latipes_hsok
ENSNBRG00000006266	lsm12b	100	97.449	ENSOMEG00000006184	lsm12b	92	97.449	Oryzias_melastigma
ENSNBRG00000006266	lsm12b	100	85.204	ENSOGAG00000010489	LSM12	100	85.204	Otolemur_garnettii
ENSNBRG00000006266	lsm12b	100	81.683	ENSOARG00000006589	LSM12	100	81.683	Ovis_aries
ENSNBRG00000006266	lsm12b	100	75.000	ENSPPAG00000034974	-	100	75.000	Pan_paniscus
ENSNBRG00000006266	lsm12b	100	84.694	ENSPPRG00000023420	LSM12	100	84.694	Panthera_pardus
ENSNBRG00000006266	lsm12b	78	84.967	ENSPTIG00000012704	-	82	84.967	Panthera_tigris_altaica
ENSNBRG00000006266	lsm12b	72	83.636	ENSPTIG00000014850	-	100	83.636	Panthera_tigris_altaica
ENSNBRG00000006266	lsm12b	100	84.694	ENSPTRG00000009261	LSM12	100	84.694	Pan_troglodytes
ENSNBRG00000006266	lsm12b	100	84.694	ENSPANG00000021315	-	100	84.694	Papio_anubis
ENSNBRG00000006266	lsm12b	100	92.347	ENSPKIG00000021058	lsm12b	100	92.347	Paramormyrops_kingsleyae
ENSNBRG00000006266	lsm12b	100	82.653	ENSPKIG00000017932	-	100	82.653	Paramormyrops_kingsleyae
ENSNBRG00000006266	lsm12b	100	96.939	ENSPMGG00000021344	lsm12b	100	96.939	Periophthalmus_magnuspinnatus
ENSNBRG00000006266	lsm12b	100	84.694	ENSPEMG00000012199	Lsm12	100	84.694	Peromyscus_maniculatus_bairdii
ENSNBRG00000006266	lsm12b	89	68.571	ENSPMAG00000005461	lsm12a	99	68.571	Petromyzon_marinus
ENSNBRG00000006266	lsm12b	100	84.694	ENSPCIG00000020244	LSM12	100	84.694	Phascolarctos_cinereus
ENSNBRG00000006266	lsm12b	100	95.408	ENSPFOG00000015930	lsm12b	100	95.408	Poecilia_formosa
ENSNBRG00000006266	lsm12b	100	95.408	ENSPLAG00000021089	lsm12b	100	95.408	Poecilia_latipinna
ENSNBRG00000006266	lsm12b	100	95.408	ENSPMEG00000012961	lsm12b	100	95.408	Poecilia_mexicana
ENSNBRG00000006266	lsm12b	87	97.661	ENSPREG00000010236	lsm12b	95	97.661	Poecilia_reticulata
ENSNBRG00000006266	lsm12b	100	84.694	ENSPPYG00000008344	LSM12	100	84.694	Pongo_abelii
ENSNBRG00000006266	lsm12b	81	84.906	ENSPCAG00000008790	LSM12	100	84.906	Procavia_capensis
ENSNBRG00000006266	lsm12b	100	84.694	ENSPCOG00000027951	LSM12	100	84.694	Propithecus_coquereli
ENSNBRG00000006266	lsm12b	100	85.204	ENSPVAG00000013706	LSM12	100	85.204	Pteropus_vampyrus
ENSNBRG00000006266	lsm12b	100	100.000	ENSPNYG00000003386	lsm12b	100	100.000	Pundamilia_nyererei
ENSNBRG00000006266	lsm12b	100	93.367	ENSPNAG00000004186	lsm12b	100	93.367	Pygocentrus_nattereri
ENSNBRG00000006266	lsm12b	100	84.184	ENSPNAG00000018435	lsm12a	100	84.184	Pygocentrus_nattereri
ENSNBRG00000006266	lsm12b	100	84.694	ENSRNOG00000020894	Lsm12	100	84.694	Rattus_norvegicus
ENSNBRG00000006266	lsm12b	100	84.694	ENSRBIG00000027910	LSM12	100	84.694	Rhinopithecus_bieti
ENSNBRG00000006266	lsm12b	99	52.577	ENSRROG00000000537	-	99	52.577	Rhinopithecus_roxellana
ENSNBRG00000006266	lsm12b	100	84.694	ENSRROG00000045530	-	100	84.694	Rhinopithecus_roxellana
ENSNBRG00000006266	lsm12b	100	84.694	ENSSBOG00000025310	LSM12	100	84.694	Saimiri_boliviensis_boliviensis
ENSNBRG00000006266	lsm12b	81	83.544	ENSSHAG00000014914	LSM12	100	83.544	Sarcophilus_harrisii
ENSNBRG00000006266	lsm12b	100	94.898	ENSSFOG00015009612	lsm12	100	94.898	Scleropages_formosus
ENSNBRG00000006266	lsm12b	100	92.857	ENSSFOG00015020392	lsm12a	100	92.857	Scleropages_formosus
ENSNBRG00000006266	lsm12b	100	97.959	ENSSMAG00000008089	lsm12b	100	97.959	Scophthalmus_maximus
ENSNBRG00000006266	lsm12b	100	97.959	ENSSDUG00000012711	lsm12b	100	97.959	Seriola_dumerili
ENSNBRG00000006266	lsm12b	100	97.959	ENSSLDG00000007404	lsm12b	100	97.959	Seriola_lalandi_dorsalis
ENSNBRG00000006266	lsm12b	78	84.314	ENSSARG00000005537	LSM12	100	84.314	Sorex_araneus
ENSNBRG00000006266	lsm12b	100	85.204	ENSSPUG00000011984	LSM12	100	85.204	Sphenodon_punctatus
ENSNBRG00000006266	lsm12b	100	98.469	ENSSPAG00000017058	lsm12b	100	98.469	Stegastes_partitus
ENSNBRG00000006266	lsm12b	100	84.694	ENSSSCG00000032394	LSM12	100	84.694	Sus_scrofa
ENSNBRG00000006266	lsm12b	100	96.939	ENSTRUG00000007121	lsm12b	100	96.939	Takifugu_rubripes
ENSNBRG00000006266	lsm12b	100	96.939	ENSTNIG00000014436	lsm12b	100	96.939	Tetraodon_nigroviridis
ENSNBRG00000006266	lsm12b	100	82.143	ENSTBEG00000012392	-	100	82.143	Tupaia_belangeri
ENSNBRG00000006266	lsm12b	100	84.184	ENSTBEG00000012523	-	100	84.184	Tupaia_belangeri
ENSNBRG00000006266	lsm12b	100	84.694	ENSTTRG00000010433	LSM12	100	84.694	Tursiops_truncatus
ENSNBRG00000006266	lsm12b	100	84.694	ENSUAMG00000006313	LSM12	100	84.694	Ursus_americanus
ENSNBRG00000006266	lsm12b	81	82.278	ENSUMAG00000012987	LSM12	90	82.278	Ursus_maritimus
ENSNBRG00000006266	lsm12b	100	80.102	ENSVPAG00000011145	LSM12	100	80.102	Vicugna_pacos
ENSNBRG00000006266	lsm12b	100	84.694	ENSVVUG00000017581	LSM12	100	84.694	Vulpes_vulpes
ENSNBRG00000006266	lsm12b	82	60.625	ENSXETG00000003371	lsm12	77	60.625	Xenopus_tropicalis
ENSNBRG00000006266	lsm12b	100	96.429	ENSXCOG00000003994	lsm12b	100	96.429	Xiphophorus_couchianus
ENSNBRG00000006266	lsm12b	100	96.429	ENSXMAG00000020950	lsm12b	100	96.429	Xiphophorus_maculatus