EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006336 (Gene tree)
Gene ID: 102799525
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1783 bases
Position: chrJH422304.1:3255619-3257401
Accession: 102799525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008131	zf-U11-48K	PF05253.12	1.3e-19	1	2
ENSNBRP00000008131	zf-U11-48K	PF05253.12	1.3e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008358	-	543	XM_006794075	ENSNBRP00000008131	180 (aa)	XP_006794138	UPI0003EC2C82

Gene Model

Click here to download ENSNBRG00000006336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006336	zgc:56699	97	60.571	ENSAPOG00000021951	-	97	60.571	Acanthochromis_polyacanthus
ENSNBRG00000006336	zgc:56699	81	61.379	ENSAPOG00000000311	-	80	61.379	Acanthochromis_polyacanthus
ENSNBRG00000006336	zgc:56699	100	72.222	ENSACIG00000013400	zgc:56699	99	72.222	Amphilophus_citrinellus
ENSNBRG00000006336	zgc:56699	97	61.714	ENSAOCG00000013650	-	97	61.714	Amphiprion_ocellaris
ENSNBRG00000006336	zgc:56699	97	48.000	ENSAPEG00000006689	zgc:56699	96	48.000	Amphiprion_percula
ENSNBRG00000006336	zgc:56699	100	68.889	ENSATEG00000024058	zgc:56699	99	68.889	Anabas_testudineus
ENSNBRG00000006336	zgc:56699	100	98.333	ENSACLG00000023562	zgc:56699	92	98.333	Astatotilapia_calliptera
ENSNBRG00000006336	zgc:56699	87	45.679	ENSAMXG00000036095	-	67	45.679	Astyanax_mexicanus
ENSNBRG00000006336	zgc:56699	98	51.648	ENSAMXG00000038346	zgc:56699	99	51.648	Astyanax_mexicanus
ENSNBRG00000006336	zgc:56699	98	64.407	ENSCSEG00000021520	zgc:56699	83	64.407	Cynoglossus_semilaevis
ENSNBRG00000006336	zgc:56699	91	53.659	ENSCVAG00000009972	zgc:56699	83	53.659	Cyprinodon_variegatus
ENSNBRG00000006336	zgc:56699	97	46.154	ENSDARG00000000887	zgc:56699	98	46.154	Danio_rerio
ENSNBRG00000006336	zgc:56699	84	45.513	ENSDARG00000099586	CR382383.2	85	45.513	Danio_rerio
ENSNBRG00000006336	zgc:56699	78	41.379	ENSEBUG00000005577	-	75	41.379	Eptatretus_burgeri
ENSNBRG00000006336	zgc:56699	95	50.847	ENSELUG00000003242	gtsf1	96	50.847	Esox_lucius
ENSNBRG00000006336	zgc:56699	99	64.607	ENSFHEG00000006036	zgc:56699	97	53.371	Fundulus_heteroclitus
ENSNBRG00000006336	zgc:56699	83	49.664	ENSGMOG00000007295	zgc:56699	98	49.664	Gadus_morhua
ENSNBRG00000006336	zgc:56699	68	42.400	ENSGALG00000035365	-	71	42.400	Gallus_gallus
ENSNBRG00000006336	zgc:56699	100	65.556	ENSGAFG00000020743	zgc:56699	99	65.556	Gambusia_affinis
ENSNBRG00000006336	zgc:56699	100	97.778	ENSHBUG00000005327	zgc:56699	100	97.778	Haplochromis_burtoni
ENSNBRG00000006336	zgc:56699	95	47.399	ENSHCOG00000010296	-	97	47.399	Hippocampus_comes
ENSNBRG00000006336	zgc:56699	97	45.556	ENSIPUG00000011498	zgc:56699	95	45.556	Ictalurus_punctatus
ENSNBRG00000006336	zgc:56699	98	68.362	ENSLBEG00000015981	zgc:56699	100	55.367	Labrus_bergylta
ENSNBRG00000006336	zgc:56699	80	43.056	ENSLOCG00000004469	zgc:56699	97	43.056	Lepisosteus_oculatus
ENSNBRG00000006336	zgc:56699	94	64.740	ENSMAMG00000001846	zgc:56699	95	64.740	Mastacembelus_armatus
ENSNBRG00000006336	zgc:56699	100	98.333	ENSMZEG00005026479	zgc:56699	92	98.333	Maylandia_zebra
ENSNBRG00000006336	zgc:56699	100	49.206	ENSMMOG00000017331	zgc:56699	99	49.206	Mola_mola
ENSNBRG00000006336	zgc:56699	100	96.111	ENSONIG00000016720	zgc:56699	92	96.111	Oreochromis_niloticus
ENSNBRG00000006336	zgc:56699	62	42.105	ENSOANG00000030381	-	74	42.105	Ornithorhynchus_anatinus
ENSNBRG00000006336	zgc:56699	89	54.658	ENSORLG00000025877	-	97	54.658	Oryzias_latipes
ENSNBRG00000006336	zgc:56699	100	51.648	ENSORLG00000015258	-	99	51.648	Oryzias_latipes
ENSNBRG00000006336	zgc:56699	89	54.658	ENSORLG00020011013	-	97	54.658	Oryzias_latipes_hni
ENSNBRG00000006336	zgc:56699	100	51.648	ENSORLG00020010990	-	99	51.648	Oryzias_latipes_hni
ENSNBRG00000006336	zgc:56699	100	52.198	ENSORLG00015004961	zgc:56699	99	52.198	Oryzias_latipes_hsok
ENSNBRG00000006336	zgc:56699	100	53.889	ENSOMEG00000021739	-	99	53.889	Oryzias_melastigma
ENSNBRG00000006336	zgc:56699	100	56.667	ENSOMEG00000021773	-	99	56.667	Oryzias_melastigma
ENSNBRG00000006336	zgc:56699	85	52.941	ENSOMEG00000013200	-	97	52.941	Oryzias_melastigma
ENSNBRG00000006336	zgc:56699	97	47.027	ENSPKIG00000017039	zgc:56699	98	47.027	Paramormyrops_kingsleyae
ENSNBRG00000006336	zgc:56699	98	59.887	ENSPMGG00000023241	zgc:56699	96	59.887	Periophthalmus_magnuspinnatus
ENSNBRG00000006336	zgc:56699	63	45.833	ENSPMAG00000009653	-	93	45.833	Petromyzon_marinus
ENSNBRG00000006336	zgc:56699	100	65.556	ENSPFOG00000009204	zgc:56699	99	65.556	Poecilia_formosa
ENSNBRG00000006336	zgc:56699	100	61.111	ENSPLAG00000009088	zgc:56699	98	61.111	Poecilia_latipinna
ENSNBRG00000006336	zgc:56699	100	65.556	ENSPMEG00000001443	zgc:56699	99	65.556	Poecilia_mexicana
ENSNBRG00000006336	zgc:56699	100	66.111	ENSPREG00000000745	zgc:56699	99	66.111	Poecilia_reticulata
ENSNBRG00000006336	zgc:56699	100	98.333	ENSPNYG00000002811	zgc:56699	100	98.333	Pundamilia_nyererei
ENSNBRG00000006336	zgc:56699	97	52.778	ENSPNAG00000005165	zgc:56699	98	52.778	Pygocentrus_nattereri
ENSNBRG00000006336	zgc:56699	93	50.595	ENSSFOG00015021600	zgc:56699	92	50.595	Scleropages_formosus
ENSNBRG00000006336	zgc:56699	100	62.222	ENSSMAG00000020886	zgc:56699	99	62.222	Scophthalmus_maximus
ENSNBRG00000006336	zgc:56699	100	67.222	ENSSDUG00000002033	zgc:56699	99	67.222	Seriola_dumerili
ENSNBRG00000006336	zgc:56699	100	67.222	ENSSLDG00000014113	zgc:56699	99	67.222	Seriola_lalandi_dorsalis
ENSNBRG00000006336	zgc:56699	83	56.579	ENSSPAG00000010005	-	97	56.579	Stegastes_partitus
ENSNBRG00000006336	zgc:56699	97	62.286	ENSSPAG00000019854	-	98	63.429	Stegastes_partitus
ENSNBRG00000006336	zgc:56699	99	54.645	ENSTRUG00000015537	zgc:56699	99	54.645	Takifugu_rubripes
ENSNBRG00000006336	zgc:56699	82	64.189	ENSTNIG00000012515	zgc:56699	97	64.189	Tetraodon_nigroviridis
ENSNBRG00000006336	zgc:56699	97	62.069	ENSXCOG00000014400	zgc:56699	85	62.069	Xiphophorus_couchianus
ENSNBRG00000006336	zgc:56699	97	66.092	ENSXMAG00000011692	zgc:56699	96	66.092	Xiphophorus_maculatus