EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006353 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein-associated protein B'-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2991 bases
Position: chrJH422357.1:106301-109291
Accession: 102782568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008285	LSM	PF01423.22	7.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008527	-	786	XM_006801860	ENSNBRP00000008285	261 (aa)	XP_006801923	-

Gene Model

Click here to download ENSNBRG00000006353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006353	snrpb	62	93.293	ENSG00000125835	SNRPB	78	90.055	Homo_sapiens
ENSNBRG00000006353	snrpb	86	99.107	ENSAPOG00000019606	snrpb	76	99.107	Acanthochromis_polyacanthus
ENSNBRG00000006353	snrpb	61	94.444	ENSAMEG00000011353	SNRPB	73	91.525	Ailuropoda_melanoleuca
ENSNBRG00000006353	snrpb	86	99.111	ENSACIG00000014480	snrpb	100	99.111	Amphilophus_citrinellus
ENSNBRG00000006353	snrpb	87	97.807	ENSAOCG00000006876	snrpb	95	97.807	Amphiprion_ocellaris
ENSNBRG00000006353	snrpb	88	97.391	ENSAPEG00000021585	snrpb	99	97.391	Amphiprion_percula
ENSNBRG00000006353	snrpb	87	96.930	ENSATEG00000009836	snrpb	95	96.930	Anabas_testudineus
ENSNBRG00000006353	snrpb	61	95.625	ENSACAG00000002053	SNRPB	75	93.064	Anolis_carolinensis
ENSNBRG00000006353	snrpb	62	93.293	ENSANAG00000024443	-	78	90.055	Aotus_nancymaae
ENSNBRG00000006353	snrpb	92	79.918	ENSANAG00000036271	-	73	82.320	Aotus_nancymaae
ENSNBRG00000006353	snrpb	87	97.807	ENSACLG00000014707	snrpb	95	97.807	Astatotilapia_calliptera
ENSNBRG00000006353	snrpb	89	94.872	ENSAMXG00000029434	snrpb	98	94.872	Astyanax_mexicanus
ENSNBRG00000006353	snrpb	88	75.630	ENSBTAG00000001038	SNRPB	78	90.055	Bos_taurus
ENSNBRG00000006353	snrpb	82	81.944	ENSCJAG00000023097	-	75	82.320	Callithrix_jacchus
ENSNBRG00000006353	snrpb	62	93.293	ENSCJAG00000020971	-	78	90.055	Callithrix_jacchus
ENSNBRG00000006353	snrpb	52	84.672	ENSCAFG00000031109	-	72	80.925	Canis_familiaris
ENSNBRG00000006353	snrpb	62	93.293	ENSCAFG00000006693	-	78	90.055	Canis_familiaris
ENSNBRG00000006353	snrpb	62	93.293	ENSCAFG00020016981	-	75	90.055	Canis_lupus_dingo
ENSNBRG00000006353	snrpb	62	93.293	ENSCHIG00000025449	-	78	90.055	Capra_hircus
ENSNBRG00000006353	snrpb	69	72.376	ENSTSYG00000032303	-	65	70.391	Carlito_syrichta
ENSNBRG00000006353	snrpb	61	94.375	ENSTSYG00000014498	-	78	90.055	Carlito_syrichta
ENSNBRG00000006353	snrpb	62	93.293	ENSCAPG00000012669	SNRPB	77	91.525	Cavia_aperea
ENSNBRG00000006353	snrpb	62	93.293	ENSCPOG00000039408	SNRPB	78	90.055	Cavia_porcellus
ENSNBRG00000006353	snrpb	62	93.293	ENSCCAG00000026002	SNRPB	78	90.055	Cebus_capucinus
ENSNBRG00000006353	snrpb	61	94.375	ENSCATG00000030230	SNRPB	78	90.055	Cercocebus_atys
ENSNBRG00000006353	snrpb	62	93.293	ENSCLAG00000012442	SNRPB	76	90.055	Chinchilla_lanigera
ENSNBRG00000006353	snrpb	62	93.293	ENSCSAG00000010840	SNRPB	78	90.055	Chlorocebus_sabaeus
ENSNBRG00000006353	snrpb	62	95.122	ENSCPBG00000026801	SNRPB	79	91.160	Chrysemys_picta_bellii
ENSNBRG00000006353	snrpb	62	93.293	ENSCANG00000019461	SNRPB	78	90.055	Colobus_angolensis_palliatus
ENSNBRG00000006353	snrpb	61	94.444	ENSCGRG00001023046	Snrpb	78	90.055	Cricetulus_griseus_chok1gshd
ENSNBRG00000006353	snrpb	61	94.444	ENSCGRG00000010423	Snrpb	77	92.486	Cricetulus_griseus_crigri
ENSNBRG00000006353	snrpb	98	88.327	ENSCSEG00000020328	snrpb	95	96.053	Cynoglossus_semilaevis
ENSNBRG00000006353	snrpb	87	95.197	ENSDARG00000011125	snrpb	95	95.197	Danio_rerio
ENSNBRG00000006353	snrpb	62	93.293	ENSDNOG00000015545	-	75	90.055	Dasypus_novemcinctus
ENSNBRG00000006353	snrpb	62	87.805	ENSDNOG00000007896	-	73	85.311	Dasypus_novemcinctus
ENSNBRG00000006353	snrpb	61	94.444	ENSDORG00000029558	Snrpb	76	92.571	Dipodomys_ordii
ENSNBRG00000006353	snrpb	70	60.914	FBgn0262601	SmB	74	67.114	Drosophila_melanogaster
ENSNBRG00000006353	snrpb	61	72.840	ENSETEG00000006830	SNRPB	79	69.613	Echinops_telfairi
ENSNBRG00000006353	snrpb	70	77.049	ENSEBUG00000007467	SNRPB	62	85.235	Eptatretus_burgeri
ENSNBRG00000006353	snrpb	62	92.683	ENSEASG00005012991	SNRPB	78	89.503	Equus_asinus_asinus
ENSNBRG00000006353	snrpb	61	94.375	ENSECAG00000011944	SNRPB	76	92.486	Equus_caballus
ENSNBRG00000006353	snrpb	61	94.444	ENSEEUG00000015568	SNRPB	64	90.055	Erinaceus_europaeus
ENSNBRG00000006353	snrpb	87	95.614	ENSELUG00000014564	snrpb	100	95.595	Esox_lucius
ENSNBRG00000006353	snrpb	62	93.293	ENSFCAG00000034090	-	78	90.055	Felis_catus
ENSNBRG00000006353	snrpb	61	96.250	ENSFALG00000004866	SNRPB	73	94.083	Ficedula_albicollis
ENSNBRG00000006353	snrpb	62	93.293	ENSFDAG00000009937	SNRPB	78	90.055	Fukomys_damarensis
ENSNBRG00000006353	snrpb	62	95.122	ENSGALG00000035421	SNRPN	74	91.525	Gallus_gallus
ENSNBRG00000006353	snrpb	85	97.309	ENSGAFG00000019558	snrpb	97	97.309	Gambusia_affinis
ENSNBRG00000006353	snrpb	87	96.053	ENSGACG00000003262	snrpb	95	96.053	Gasterosteus_aculeatus
ENSNBRG00000006353	snrpb	62	95.122	ENSGAGG00000001308	SNRPB	75	91.160	Gopherus_agassizii
ENSNBRG00000006353	snrpb	62	93.293	ENSGGOG00000016138	SNRPB	78	90.055	Gorilla_gorilla
ENSNBRG00000006353	snrpb	100	98.473	ENSHBUG00000008369	snrpb	100	98.473	Haplochromis_burtoni
ENSNBRG00000006353	snrpb	62	93.293	ENSHGLG00000016241	-	78	90.055	Heterocephalus_glaber_female
ENSNBRG00000006353	snrpb	56	84.932	ENSHGLG00000016505	-	84	79.429	Heterocephalus_glaber_female
ENSNBRG00000006353	snrpb	62	93.293	ENSHGLG00100012877	-	78	90.055	Heterocephalus_glaber_male
ENSNBRG00000006353	snrpb	56	84.932	ENSHGLG00100004178	-	84	79.429	Heterocephalus_glaber_male
ENSNBRG00000006353	snrpb	87	96.930	ENSHCOG00000014888	snrpb	95	96.930	Hippocampus_comes
ENSNBRG00000006353	snrpb	87	95.197	ENSIPUG00000024569	SNRPB	95	95.197	Ictalurus_punctatus
ENSNBRG00000006353	snrpb	62	91.463	ENSSTOG00000033664	-	75	88.398	Ictidomys_tridecemlineatus
ENSNBRG00000006353	snrpb	72	77.005	ENSSTOG00000027821	-	61	95.556	Ictidomys_tridecemlineatus
ENSNBRG00000006353	snrpb	62	93.293	ENSJJAG00000024170	Snrpb	78	90.055	Jaculus_jaculus
ENSNBRG00000006353	snrpb	83	97.685	ENSKMAG00000014494	snrpb	96	94.444	Kryptolebias_marmoratus
ENSNBRG00000006353	snrpb	90	95.319	ENSLBEG00000005678	snrpb	95	96.930	Labrus_bergylta
ENSNBRG00000006353	snrpb	69	91.803	ENSLACG00000011459	SNRPB	75	91.160	Latimeria_chalumnae
ENSNBRG00000006353	snrpb	87	95.633	ENSLOCG00000002687	snrpb	95	95.633	Lepisosteus_oculatus
ENSNBRG00000006353	snrpb	62	89.024	ENSLAFG00000017588	SNRPB	76	87.571	Loxodonta_africana
ENSNBRG00000006353	snrpb	63	92.771	ENSMFAG00000038756	SNRPB	78	90.055	Macaca_fascicularis
ENSNBRG00000006353	snrpb	63	92.771	ENSMMUG00000010050	SNRPB	78	90.055	Macaca_mulatta
ENSNBRG00000006353	snrpb	63	92.771	ENSMNEG00000027954	SNRPB	78	90.055	Macaca_nemestrina
ENSNBRG00000006353	snrpb	62	93.293	ENSMLEG00000022346	SNRPB	78	90.055	Mandrillus_leucophaeus
ENSNBRG00000006353	snrpb	86	99.107	ENSMAMG00000009294	snrpb	91	99.107	Mastacembelus_armatus
ENSNBRG00000006353	snrpb	87	97.807	ENSMZEG00005011856	snrpb	95	97.807	Maylandia_zebra
ENSNBRG00000006353	snrpb	67	82.486	ENSMICG00000015983	-	81	81.356	Microcebus_murinus
ENSNBRG00000006353	snrpb	61	94.375	ENSMICG00000016519	SNRPB	78	90.055	Microcebus_murinus
ENSNBRG00000006353	snrpb	62	92.683	ENSMOCG00000002892	-	78	89.503	Microtus_ochrogaster
ENSNBRG00000006353	snrpb	53	75.540	ENSMOCG00000021362	-	75	72.626	Microtus_ochrogaster
ENSNBRG00000006353	snrpb	87	97.345	ENSMMOG00000013226	snrpb	96	97.345	Mola_mola
ENSNBRG00000006353	snrpb	87	96.930	ENSMALG00000020839	snrpb	77	96.930	Monopterus_albus
ENSNBRG00000006353	snrpb	62	93.293	MGP_CAROLIEiJ_G0024293	Snrpb	78	90.055	Mus_caroli
ENSNBRG00000006353	snrpb	62	93.293	ENSMUSG00000027404	Snrpb	78	90.055	Mus_musculus
ENSNBRG00000006353	snrpb	62	93.293	MGP_PahariEiJ_G0025738	Snrpb	78	90.055	Mus_pahari
ENSNBRG00000006353	snrpb	62	93.293	MGP_SPRETEiJ_G0025213	Snrpb	78	90.055	Mus_spretus
ENSNBRG00000006353	snrpb	62	93.293	ENSMPUG00000009283	SNRPB	78	90.055	Mustela_putorius_furo
ENSNBRG00000006353	snrpb	62	89.634	ENSMLUG00000016951	SNRPB	75	86.740	Myotis_lucifugus
ENSNBRG00000006353	snrpb	62	93.293	ENSNGAG00000012051	Snrpb	78	90.055	Nannospalax_galili
ENSNBRG00000006353	snrpb	62	93.293	ENSNLEG00000029067	SNRPB	75	91.525	Nomascus_leucogenys
ENSNBRG00000006353	snrpb	62	93.293	ENSMEUG00000015625	SNRPB	79	91.525	Notamacropus_eugenii
ENSNBRG00000006353	snrpb	62	87.805	ENSODEG00000016060	-	76	85.083	Octodon_degus
ENSNBRG00000006353	snrpb	62	93.293	ENSODEG00000004305	-	78	90.055	Octodon_degus
ENSNBRG00000006353	snrpb	87	97.807	ENSONIG00000000248	snrpb	95	97.807	Oreochromis_niloticus
ENSNBRG00000006353	snrpb	62	90.854	ENSOCUG00000028215	-	75	87.845	Oryctolagus_cuniculus
ENSNBRG00000006353	snrpb	80	86.385	ENSOCUG00000021456	-	75	86.188	Oryctolagus_cuniculus
ENSNBRG00000006353	snrpb	80	64.286	ENSOCUG00000026813	-	76	61.932	Oryctolagus_cuniculus
ENSNBRG00000006353	snrpb	66	87.429	ENSOCUG00000022423	-	86	87.425	Oryctolagus_cuniculus
ENSNBRG00000006353	snrpb	62	93.293	ENSOCUG00000014042	-	75	90.055	Oryctolagus_cuniculus
ENSNBRG00000006353	snrpb	87	96.930	ENSORLG00000021862	snrpb	95	96.930	Oryzias_latipes
ENSNBRG00000006353	snrpb	62	93.293	ENSOGAG00000016149	SNRPB	75	90.055	Otolemur_garnettii
ENSNBRG00000006353	snrpb	62	93.293	ENSOARG00000006740	SNRPB	78	90.055	Ovis_aries
ENSNBRG00000006353	snrpb	62	93.293	ENSPPAG00000036314	SNRPB	78	90.055	Pan_paniscus
ENSNBRG00000006353	snrpb	62	93.293	ENSPPRG00000003233	-	78	90.055	Panthera_pardus
ENSNBRG00000006353	snrpb	62	93.293	ENSPTIG00000007468	SNRPB	77	91.525	Panthera_tigris_altaica
ENSNBRG00000006353	snrpb	62	93.293	ENSPTRG00000013176	SNRPB	78	90.055	Pan_troglodytes
ENSNBRG00000006353	snrpb	62	93.293	ENSPANG00000020362	SNRPB	75	90.055	Papio_anubis
ENSNBRG00000006353	snrpb	87	94.323	ENSPKIG00000002865	snrpb	95	94.323	Paramormyrops_kingsleyae
ENSNBRG00000006353	snrpb	62	95.122	ENSPSIG00000014125	SNRPB	73	92.655	Pelodiscus_sinensis
ENSNBRG00000006353	snrpb	86	95.982	ENSPMGG00000016349	snrpb	95	95.982	Periophthalmus_magnuspinnatus
ENSNBRG00000006353	snrpb	62	93.293	ENSPEMG00000007948	Snrpb	78	90.055	Peromyscus_maniculatus_bairdii
ENSNBRG00000006353	snrpb	62	92.683	ENSPCIG00000004694	SNRPB	73	90.960	Phascolarctos_cinereus
ENSNBRG00000006353	snrpb	56	98.630	ENSPFOG00000011802	snrpb	62	98.630	Poecilia_formosa
ENSNBRG00000006353	snrpb	82	78.505	ENSPREG00000015515	snrpb	62	100.000	Poecilia_reticulata
ENSNBRG00000006353	snrpb	62	93.293	ENSPPYG00000010841	SNRPB	78	90.055	Pongo_abelii
ENSNBRG00000006353	snrpb	62	93.293	ENSPCOG00000013686	SNRPB	78	90.055	Propithecus_coquereli
ENSNBRG00000006353	snrpb	62	92.073	ENSPVAG00000017013	SNRPB	62	90.395	Pteropus_vampyrus
ENSNBRG00000006353	snrpb	87	97.807	ENSPNYG00000014788	snrpb	95	97.807	Pundamilia_nyererei
ENSNBRG00000006353	snrpb	94	89.879	ENSPNAG00000016126	snrpb	95	95.197	Pygocentrus_nattereri
ENSNBRG00000006353	snrpb	62	93.293	ENSRNOG00000006961	Snrpb	78	90.055	Rattus_norvegicus
ENSNBRG00000006353	snrpb	62	93.293	ENSRBIG00000040505	SNRPB	78	90.556	Rhinopithecus_bieti
ENSNBRG00000006353	snrpb	62	93.293	ENSRROG00000036094	SNRPB	78	90.055	Rhinopithecus_roxellana
ENSNBRG00000006353	snrpb	61	94.375	ENSSBOG00000027310	SNRPB	78	90.055	Saimiri_boliviensis_boliviensis
ENSNBRG00000006353	snrpb	62	93.902	ENSSHAG00000010394	SNRPB	75	90.608	Sarcophilus_harrisii
ENSNBRG00000006353	snrpb	87	93.886	ENSSFOG00015002870	snrpb	95	93.886	Scleropages_formosus
ENSNBRG00000006353	snrpb	87	96.491	ENSSMAG00000006766	snrpb	95	96.491	Scophthalmus_maximus
ENSNBRG00000006353	snrpb	87	97.807	ENSSDUG00000018539	snrpb	95	97.807	Seriola_dumerili
ENSNBRG00000006353	snrpb	87	97.807	ENSSLDG00000022391	snrpb	95	97.807	Seriola_lalandi_dorsalis
ENSNBRG00000006353	snrpb	62	77.439	ENSSARG00000003084	SNRPB	76	76.836	Sorex_araneus
ENSNBRG00000006353	snrpb	62	95.122	ENSSPUG00000015659	SNRPB	74	92.655	Sphenodon_punctatus
ENSNBRG00000006353	snrpb	87	97.807	ENSSPAG00000021992	snrpb	95	97.807	Stegastes_partitus
ENSNBRG00000006353	snrpb	62	93.293	ENSSSCG00000040857	-	78	90.055	Sus_scrofa
ENSNBRG00000006353	snrpb	67	70.950	ENSSSCG00000011966	-	74	67.797	Sus_scrofa
ENSNBRG00000006353	snrpb	63	82.036	ENSTGUG00000005684	SNRPB	57	95.620	Taeniopygia_guttata
ENSNBRG00000006353	snrpb	87	96.491	ENSTRUG00000023094	snrpb	99	96.491	Takifugu_rubripes
ENSNBRG00000006353	snrpb	87	96.491	ENSTNIG00000002991	snrpb	95	96.491	Tetraodon_nigroviridis
ENSNBRG00000006353	snrpb	62	93.293	ENSUAMG00000005984	-	87	88.950	Ursus_americanus
ENSNBRG00000006353	snrpb	73	75.393	ENSUMAG00000002123	-	65	92.199	Ursus_maritimus
ENSNBRG00000006353	snrpb	86	72.489	ENSVVUG00000010086	-	78	72.376	Vulpes_vulpes
ENSNBRG00000006353	snrpb	62	92.683	ENSVVUG00000025654	-	75	89.503	Vulpes_vulpes
ENSNBRG00000006353	snrpb	56	96.575	ENSXETG00000027266	snrpb	76	90.055	Xenopus_tropicalis
ENSNBRG00000006353	snrpb	52	100.000	ENSXMAG00000028767	snrpb	58	99.265	Xiphophorus_maculatus