EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006457 (Gene tree)
Gene ID: 102799239
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridylate synthase domain-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4110 bases
Position: chrJH422327.1:2918072-2922181
Accession: 102799239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008313	PseudoU_synth_2	PF00849.22	5.9e-27	1	1
ENSNBRP00000008288	PseudoU_synth_2	PF00849.22	5.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008555	-	897	XM_006798029	ENSNBRP00000008313	298 (aa)	XP_006798092	-
ENSNBRT00000008530	-	924	-	ENSNBRP00000008288	307 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000006457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006457	rpusd1	98	56.818	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSNBRG00000006457	rpusd1	100	81.373	ENSAPOG00000022221	rpusd1	99	81.029	Acanthochromis_polyacanthus
ENSNBRG00000006457	rpusd1	98	60.000	ENSAMEG00000007461	RPUSD1	98	60.000	Ailuropoda_melanoleuca
ENSNBRG00000006457	rpusd1	100	88.746	ENSACIG00000015863	rpusd1	100	88.746	Amphilophus_citrinellus
ENSNBRG00000006457	rpusd1	100	80.906	ENSAOCG00000021975	rpusd1	97	81.350	Amphiprion_ocellaris
ENSNBRG00000006457	rpusd1	100	81.230	ENSAPEG00000001316	rpusd1	97	81.672	Amphiprion_percula
ENSNBRG00000006457	rpusd1	100	80.906	ENSATEG00000002984	rpusd1	99	82.958	Anabas_testudineus
ENSNBRG00000006457	rpusd1	77	59.494	ENSAPLG00000012316	RPUSD1	98	59.494	Anas_platyrhynchos
ENSNBRG00000006457	rpusd1	98	64.983	ENSACAG00000008953	RPUSD1	99	64.983	Anolis_carolinensis
ENSNBRG00000006457	rpusd1	98	56.678	ENSANAG00000024709	RPUSD1	79	65.182	Aotus_nancymaae
ENSNBRG00000006457	rpusd1	100	95.177	ENSACLG00000013692	rpusd1	100	95.177	Astatotilapia_calliptera
ENSNBRG00000006457	rpusd1	99	70.847	ENSAMXG00000019802	rpusd1	99	70.847	Astyanax_mexicanus
ENSNBRG00000006457	rpusd1	98	60.133	ENSBTAG00000000179	RPUSD1	81	68.145	Bos_taurus
ENSNBRG00000006457	rpusd1	98	56.863	ENSCJAG00000012253	RPUSD1	79	64.777	Callithrix_jacchus
ENSNBRG00000006457	rpusd1	98	58.983	ENSCAFG00000019614	RPUSD1	98	58.983	Canis_familiaris
ENSNBRG00000006457	rpusd1	98	58.983	ENSCAFG00020008891	RPUSD1	98	58.983	Canis_lupus_dingo
ENSNBRG00000006457	rpusd1	98	60.465	ENSCHIG00000012872	RPUSD1	81	68.548	Capra_hircus
ENSNBRG00000006457	rpusd1	98	57.966	ENSTSYG00000036934	RPUSD1	98	57.627	Carlito_syrichta
ENSNBRG00000006457	rpusd1	98	57.860	ENSCAPG00000014219	RPUSD1	81	65.182	Cavia_aperea
ENSNBRG00000006457	rpusd1	98	57.860	ENSCPOG00000034604	RPUSD1	81	65.182	Cavia_porcellus
ENSNBRG00000006457	rpusd1	98	56.352	ENSCCAG00000034385	RPUSD1	79	64.777	Cebus_capucinus
ENSNBRG00000006457	rpusd1	98	57.792	ENSCATG00000042983	RPUSD1	98	57.049	Cercocebus_atys
ENSNBRG00000006457	rpusd1	98	57.525	ENSCLAG00000013966	RPUSD1	81	65.587	Chinchilla_lanigera
ENSNBRG00000006457	rpusd1	98	57.468	ENSCSAG00000012121	RPUSD1	98	56.678	Chlorocebus_sabaeus
ENSNBRG00000006457	rpusd1	98	63.123	ENSCPBG00000021101	RPUSD1	99	62.667	Chrysemys_picta_bellii
ENSNBRG00000006457	rpusd1	82	65.182	ENSCANG00000028576	RPUSD1	78	75.490	Colobus_angolensis_palliatus
ENSNBRG00000006457	rpusd1	98	58.586	ENSCGRG00001014253	Rpusd1	98	58.586	Cricetulus_griseus_chok1gshd
ENSNBRG00000006457	rpusd1	98	58.586	ENSCGRG00000017995	Rpusd1	98	58.586	Cricetulus_griseus_crigri
ENSNBRG00000006457	rpusd1	99	78.644	ENSCSEG00000018512	rpusd1	98	78.361	Cynoglossus_semilaevis
ENSNBRG00000006457	rpusd1	100	79.412	ENSCVAG00000022746	rpusd1	100	79.412	Cyprinodon_variegatus
ENSNBRG00000006457	rpusd1	98	73.898	ENSDARG00000060192	rpusd1	99	73.898	Danio_rerio
ENSNBRG00000006457	rpusd1	98	57.143	ENSDNOG00000003721	RPUSD1	98	57.143	Dasypus_novemcinctus
ENSNBRG00000006457	rpusd1	98	58.446	ENSDORG00000026656	Rpusd1	98	58.446	Dipodomys_ordii
ENSNBRG00000006457	rpusd1	96	48.026	ENSEBUG00000008767	rpusd1	92	48.026	Eptatretus_burgeri
ENSNBRG00000006457	rpusd1	99	58.013	ENSEASG00005018421	RPUSD1	60	67.068	Equus_asinus_asinus
ENSNBRG00000006457	rpusd1	100	68.831	ENSELUG00000014307	rpusd1	90	70.874	Esox_lucius
ENSNBRG00000006457	rpusd1	98	58.983	ENSFCAG00000010359	RPUSD1	98	58.983	Felis_catus
ENSNBRG00000006457	rpusd1	98	65.436	ENSFALG00000003211	RPUSD1	99	65.101	Ficedula_albicollis
ENSNBRG00000006457	rpusd1	98	57.333	ENSFDAG00000013398	RPUSD1	98	50.789	Fukomys_damarensis
ENSNBRG00000006457	rpusd1	100	78.827	ENSFHEG00000004736	rpusd1	100	79.805	Fundulus_heteroclitus
ENSNBRG00000006457	rpusd1	99	74.267	ENSGMOG00000010756	rpusd1	99	73.616	Gadus_morhua
ENSNBRG00000006457	rpusd1	98	63.000	ENSGALG00000005315	RPUSD1	99	63.000	Gallus_gallus
ENSNBRG00000006457	rpusd1	100	79.276	ENSGAFG00000009886	rpusd1	100	79.276	Gambusia_affinis
ENSNBRG00000006457	rpusd1	100	77.814	ENSGACG00000014276	rpusd1	100	80.707	Gasterosteus_aculeatus
ENSNBRG00000006457	rpusd1	98	62.252	ENSGAGG00000004181	RPUSD1	99	62.000	Gopherus_agassizii
ENSNBRG00000006457	rpusd1	98	57.605	ENSGGOG00000013997	RPUSD1	98	57.655	Gorilla_gorilla
ENSNBRG00000006457	rpusd1	100	95.498	ENSHBUG00000023728	rpusd1	100	95.498	Haplochromis_burtoni
ENSNBRG00000006457	rpusd1	98	57.191	ENSHGLG00000002595	RPUSD1	81	64.777	Heterocephalus_glaber_female
ENSNBRG00000006457	rpusd1	98	57.191	ENSHGLG00100014303	RPUSD1	81	64.777	Heterocephalus_glaber_male
ENSNBRG00000006457	rpusd1	99	76.431	ENSHCOG00000002390	rpusd1	99	74.351	Hippocampus_comes
ENSNBRG00000006457	rpusd1	98	69.128	ENSIPUG00000001570	rpusd1	98	69.435	Ictalurus_punctatus
ENSNBRG00000006457	rpusd1	98	57.475	ENSSTOG00000004276	RPUSD1	98	51.266	Ictidomys_tridecemlineatus
ENSNBRG00000006457	rpusd1	98	58.140	ENSJJAG00000015696	Rpusd1	98	58.140	Jaculus_jaculus
ENSNBRG00000006457	rpusd1	100	78.502	ENSKMAG00000017287	rpusd1	100	78.502	Kryptolebias_marmoratus
ENSNBRG00000006457	rpusd1	100	77.346	ENSLBEG00000013354	RPUSD1	99	77.814	Labrus_bergylta
ENSNBRG00000006457	rpusd1	100	77.346	ENSLBEG00000022502	rpusd1	99	77.814	Labrus_bergylta
ENSNBRG00000006457	rpusd1	98	63.087	ENSLACG00000008869	RPUSD1	99	63.667	Latimeria_chalumnae
ENSNBRG00000006457	rpusd1	72	80.093	ENSLOCG00000005682	rpusd1	99	80.093	Lepisosteus_oculatus
ENSNBRG00000006457	rpusd1	98	57.288	ENSLAFG00000002115	RPUSD1	98	49.679	Loxodonta_africana
ENSNBRG00000006457	rpusd1	98	57.792	ENSMFAG00000003961	RPUSD1	98	57.516	Macaca_fascicularis
ENSNBRG00000006457	rpusd1	98	57.792	ENSMMUG00000000842	RPUSD1	98	57.516	Macaca_mulatta
ENSNBRG00000006457	rpusd1	98	57.792	ENSMNEG00000042712	RPUSD1	98	57.516	Macaca_nemestrina
ENSNBRG00000006457	rpusd1	98	57.792	ENSMLEG00000030591	RPUSD1	98	57.516	Mandrillus_leucophaeus
ENSNBRG00000006457	rpusd1	100	81.350	ENSMAMG00000004735	rpusd1	99	82.051	Mastacembelus_armatus
ENSNBRG00000006457	rpusd1	100	95.177	ENSMZEG00005003214	rpusd1	100	95.177	Maylandia_zebra
ENSNBRG00000006457	rpusd1	97	63.787	ENSMGAG00000005447	RPUSD1	99	64.000	Meleagris_gallopavo
ENSNBRG00000006457	rpusd1	82	57.490	ENSMAUG00000019998	Rpusd1	94	57.490	Mesocricetus_auratus
ENSNBRG00000006457	rpusd1	98	56.908	ENSMICG00000017561	RPUSD1	78	75.490	Microcebus_murinus
ENSNBRG00000006457	rpusd1	98	59.000	ENSMOCG00000014082	Rpusd1	98	59.000	Microtus_ochrogaster
ENSNBRG00000006457	rpusd1	99	76.949	ENSMMOG00000012569	rpusd1	99	76.948	Mola_mola
ENSNBRG00000006457	rpusd1	99	60.518	ENSMODG00000016882	RPUSD1	99	60.518	Monodelphis_domestica
ENSNBRG00000006457	rpusd1	100	79.100	ENSMALG00000017818	rpusd1	99	82.372	Monopterus_albus
ENSNBRG00000006457	rpusd1	98	59.000	MGP_CAROLIEiJ_G0021244	Rpusd1	98	59.000	Mus_caroli
ENSNBRG00000006457	rpusd1	98	58.528	ENSMUSG00000041199	Rpusd1	98	58.528	Mus_musculus
ENSNBRG00000006457	rpusd1	98	58.609	MGP_PahariEiJ_G0023562	Rpusd1	98	51.097	Mus_pahari
ENSNBRG00000006457	rpusd1	98	58.528	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.528	Mus_spretus
ENSNBRG00000006457	rpusd1	96	59.310	ENSMPUG00000015897	RPUSD1	96	59.310	Mustela_putorius_furo
ENSNBRG00000006457	rpusd1	98	57.566	ENSMLUG00000001089	RPUSD1	79	66.397	Myotis_lucifugus
ENSNBRG00000006457	rpusd1	98	57.860	ENSNGAG00000003595	Rpusd1	98	57.860	Nannospalax_galili
ENSNBRG00000006457	rpusd1	55	49.133	ENSNLEG00000008424	-	97	49.711	Nomascus_leucogenys
ENSNBRG00000006457	rpusd1	98	63.051	ENSMEUG00000016049	RPUSD1	98	59.677	Notamacropus_eugenii
ENSNBRG00000006457	rpusd1	98	52.381	ENSOPRG00000008340	RPUSD1	98	52.381	Ochotona_princeps
ENSNBRG00000006457	rpusd1	98	57.525	ENSODEG00000016945	RPUSD1	81	64.919	Octodon_degus
ENSNBRG00000006457	rpusd1	99	93.831	ENSONIG00000015672	rpusd1	100	93.831	Oreochromis_niloticus
ENSNBRG00000006457	rpusd1	100	77.451	ENSORLG00000013009	rpusd1	99	77.451	Oryzias_latipes
ENSNBRG00000006457	rpusd1	100	77.451	ENSORLG00020010382	rpusd1	99	77.451	Oryzias_latipes_hni
ENSNBRG00000006457	rpusd1	100	76.471	ENSORLG00015021354	rpusd1	99	76.471	Oryzias_latipes_hsok
ENSNBRG00000006457	rpusd1	100	77.409	ENSOMEG00000021426	rpusd1	99	77.409	Oryzias_melastigma
ENSNBRG00000006457	rpusd1	98	55.627	ENSOGAG00000003795	RPUSD1	79	64.777	Otolemur_garnettii
ENSNBRG00000006457	rpusd1	98	59.416	ENSOARG00000014254	RPUSD1	81	68.145	Ovis_aries
ENSNBRG00000006457	rpusd1	98	57.143	ENSPPAG00000034797	RPUSD1	78	75.490	Pan_paniscus
ENSNBRG00000006457	rpusd1	98	60.000	ENSPPRG00000012389	RPUSD1	98	58.983	Panthera_pardus
ENSNBRG00000006457	rpusd1	99	59.933	ENSPTIG00000008545	RPUSD1	77	74.257	Panthera_tigris_altaica
ENSNBRG00000006457	rpusd1	98	57.143	ENSPTRG00000007565	RPUSD1	78	75.490	Pan_troglodytes
ENSNBRG00000006457	rpusd1	98	57.792	ENSPANG00000024401	RPUSD1	98	57.516	Papio_anubis
ENSNBRG00000006457	rpusd1	100	68.750	ENSPKIG00000018890	rpusd1	91	68.750	Paramormyrops_kingsleyae
ENSNBRG00000006457	rpusd1	98	64.784	ENSPSIG00000013945	RPUSD1	99	63.333	Pelodiscus_sinensis
ENSNBRG00000006457	rpusd1	100	73.826	ENSPMGG00000014950	rpusd1	99	72.964	Periophthalmus_magnuspinnatus
ENSNBRG00000006457	rpusd1	98	58.667	ENSPEMG00000000497	Rpusd1	98	58.667	Peromyscus_maniculatus_bairdii
ENSNBRG00000006457	rpusd1	99	54.045	ENSPMAG00000001563	rpusd1	99	55.263	Petromyzon_marinus
ENSNBRG00000006457	rpusd1	99	63.880	ENSPCIG00000021216	-	93	59.683	Phascolarctos_cinereus
ENSNBRG00000006457	rpusd1	100	78.947	ENSPFOG00000007946	rpusd1	100	78.947	Poecilia_formosa
ENSNBRG00000006457	rpusd1	100	79.276	ENSPLAG00000011925	rpusd1	100	78.947	Poecilia_latipinna
ENSNBRG00000006457	rpusd1	100	78.947	ENSPMEG00000002910	rpusd1	100	78.947	Poecilia_mexicana
ENSNBRG00000006457	rpusd1	100	80.592	ENSPREG00000019851	rpusd1	100	80.592	Poecilia_reticulata
ENSNBRG00000006457	rpusd1	98	45.918	ENSPCAG00000002258	RPUSD1	82	50.407	Procavia_capensis
ENSNBRG00000006457	rpusd1	98	57.049	ENSPCOG00000022582	RPUSD1	78	75.490	Propithecus_coquereli
ENSNBRG00000006457	rpusd1	98	54.248	ENSPVAG00000013104	RPUSD1	79	60.729	Pteropus_vampyrus
ENSNBRG00000006457	rpusd1	100	95.498	ENSPNYG00000024076	rpusd1	100	95.498	Pundamilia_nyererei
ENSNBRG00000006457	rpusd1	99	68.136	ENSPNAG00000013806	rpusd1	99	64.839	Pygocentrus_nattereri
ENSNBRG00000006457	rpusd1	98	58.689	ENSRNOG00000023639	Rpusd1	98	58.528	Rattus_norvegicus
ENSNBRG00000006457	rpusd1	98	57.792	ENSRBIG00000030238	RPUSD1	98	57.843	Rhinopithecus_bieti
ENSNBRG00000006457	rpusd1	98	57.792	ENSRROG00000036663	RPUSD1	98	57.843	Rhinopithecus_roxellana
ENSNBRG00000006457	rpusd1	98	58.923	ENSSBOG00000033063	RPUSD1	98	58.923	Saimiri_boliviensis_boliviensis
ENSNBRG00000006457	rpusd1	98	62.207	ENSSHAG00000013500	RPUSD1	98	59.744	Sarcophilus_harrisii
ENSNBRG00000006457	rpusd1	98	72.727	ENSSFOG00015014394	rpusd1	99	72.333	Scleropages_formosus
ENSNBRG00000006457	rpusd1	100	82.637	ENSSMAG00000008045	rpusd1	93	82.637	Scophthalmus_maximus
ENSNBRG00000006457	rpusd1	100	81.150	ENSSDUG00000001829	rpusd1	97	84.566	Seriola_dumerili
ENSNBRG00000006457	rpusd1	100	81.150	ENSSLDG00000020853	rpusd1	97	84.566	Seriola_lalandi_dorsalis
ENSNBRG00000006457	rpusd1	55	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSNBRG00000006457	rpusd1	61	59.574	ENSSPUG00000005119	-	98	57.447	Sphenodon_punctatus
ENSNBRG00000006457	rpusd1	100	82.524	ENSSPAG00000012708	rpusd1	99	84.244	Stegastes_partitus
ENSNBRG00000006457	rpusd1	98	59.016	ENSSSCG00000008000	RPUSD1	95	68.016	Sus_scrofa
ENSNBRG00000006457	rpusd1	83	71.138	ENSTGUG00000015375	RPUSD1	97	71.138	Taeniopygia_guttata
ENSNBRG00000006457	rpusd1	100	77.346	ENSTRUG00000003041	rpusd1	99	78.778	Takifugu_rubripes
ENSNBRG00000006457	rpusd1	99	73.559	ENSTNIG00000002660	rpusd1	99	74.237	Tetraodon_nigroviridis
ENSNBRG00000006457	rpusd1	98	58.974	ENSTTRG00000010167	RPUSD1	79	67.339	Tursiops_truncatus
ENSNBRG00000006457	rpusd1	98	59.322	ENSUAMG00000012736	RPUSD1	98	59.322	Ursus_americanus
ENSNBRG00000006457	rpusd1	98	59.322	ENSUMAG00000021174	RPUSD1	98	59.322	Ursus_maritimus
ENSNBRG00000006457	rpusd1	98	59.322	ENSVVUG00000012357	RPUSD1	98	59.322	Vulpes_vulpes
ENSNBRG00000006457	rpusd1	98	65.657	ENSXETG00000007184	rpusd1	98	65.657	Xenopus_tropicalis
ENSNBRG00000006457	rpusd1	100	79.605	ENSXCOG00000017930	rpusd1	100	79.605	Xiphophorus_couchianus
ENSNBRG00000006457	rpusd1	100	80.263	ENSXMAG00000024084	rpusd1	100	80.263	Xiphophorus_maculatus