EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000006466 (Gene tree)
Gene ID: 102798901
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: elongation factor Tu%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 6930 bases
Position: chrJH422546.1:91413-98342
Accession: 102798901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008341	GTP_EFTU	PF00009.27	2e-42	1	1
ENSNBRP00000008296	GTP_EFTU	PF00009.27	3.5e-42	1	1
ENSNBRP00000008349	GTP_EFTU	PF00009.27	4.8e-42	1	1
ENSNBRP00000008341	GTP_EFTU_D2	PF03144.25	1.3e-15	1	1
ENSNBRP00000008349	GTP_EFTU_D2	PF03144.25	1.4e-15	1	1
ENSNBRP00000008341	GTP_EFTU_D3	PF03143.17	2e-25	1	1
ENSNBRP00000008349	GTP_EFTU_D3	PF03143.17	2.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008593	-	1176	-	ENSNBRP00000008349	391 (aa)	-	-
ENSNBRT00000008538	-	624	-	ENSNBRP00000008296	207 (aa)	-	-
ENSNBRT00000008584	-	1131	XM_006809163	ENSNBRP00000008341	376 (aa)	XP_006809226	-

Gene Model

Click here to download ENSNBRG00000006466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000006466	tufm	92	30.256	ENSNBRG00000013552	si:dkey-37o8.1	84	30.256
ENSNBRG00000006466	tufm	52	77.778	ENSNBRG00000000182	-	54	83.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006466	tufm	96	77.686	ENSG00000178952	TUFM	80	77.686	Homo_sapiens
ENSNBRG00000006466	tufm	96	96.133	ENSAPOG00000013385	tufm	100	82.287	Acanthochromis_polyacanthus
ENSNBRG00000006466	tufm	96	79.558	ENSAMEG00000015551	TUFM	80	79.558	Ailuropoda_melanoleuca
ENSNBRG00000006466	tufm	96	95.304	ENSACIG00000007388	tufm	84	94.795	Amphilophus_citrinellus
ENSNBRG00000006466	tufm	96	96.133	ENSAOCG00000001032	tufm	100	82.287	Amphiprion_ocellaris
ENSNBRG00000006466	tufm	96	96.133	ENSAPEG00000015751	tufm	100	82.287	Amphiprion_percula
ENSNBRG00000006466	tufm	96	93.646	ENSATEG00000002905	tufm	97	80.269	Anabas_testudineus
ENSNBRG00000006466	tufm	96	81.163	ENSACAG00000005399	TUFM	79	80.769	Anolis_carolinensis
ENSNBRG00000006466	tufm	96	75.967	ENSANAG00000022206	TUFM	80	75.967	Aotus_nancymaae
ENSNBRG00000006466	tufm	96	99.171	ENSACLG00000007403	tufm	93	84.978	Astatotilapia_calliptera
ENSNBRG00000006466	tufm	96	78.729	ENSBTAG00000019216	TUFM	81	78.356	Bos_taurus
ENSNBRG00000006466	tufm	95	56.164	WBGene00007000	tufm-1	73	56.164	Caenorhabditis_elegans
ENSNBRG00000006466	tufm	96	75.967	ENSCJAG00000006236	TUFM	80	75.967	Callithrix_jacchus
ENSNBRG00000006466	tufm	96	79.558	ENSCAFG00000017216	TUFM	81	79.178	Canis_familiaris
ENSNBRG00000006466	tufm	96	79.558	ENSCAFG00020017574	TUFM	81	79.178	Canis_lupus_dingo
ENSNBRG00000006466	tufm	96	79.006	ENSCHIG00000020583	TUFM	81	78.630	Capra_hircus
ENSNBRG00000006466	tufm	96	78.788	ENSTSYG00000026053	TUFM	80	78.788	Carlito_syrichta
ENSNBRG00000006466	tufm	96	79.558	ENSCPOG00000010534	TUFM	81	79.178	Cavia_porcellus
ENSNBRG00000006466	tufm	96	76.243	ENSCCAG00000033296	TUFM	80	76.243	Cebus_capucinus
ENSNBRG00000006466	tufm	96	77.348	ENSCATG00000035822	TUFM	80	77.348	Cercocebus_atys
ENSNBRG00000006466	tufm	96	79.282	ENSCLAG00000013969	TUFM	81	78.904	Chinchilla_lanigera
ENSNBRG00000006466	tufm	96	77.072	ENSCSAG00000006314	TUFM	80	77.072	Chlorocebus_sabaeus
ENSNBRG00000006466	tufm	96	79.614	ENSCHOG00000009077	TUFM	80	79.614	Choloepus_hoffmanni
ENSNBRG00000006466	tufm	96	80.939	ENSCPBG00000003874	TUFM	79	80.939	Chrysemys_picta_bellii
ENSNBRG00000006466	tufm	95	57.103	ENSCING00000002841	-	85	56.593	Ciona_intestinalis
ENSNBRG00000006466	tufm	95	57.821	ENSCSAVG00000009380	-	78	57.821	Ciona_savignyi
ENSNBRG00000006466	tufm	96	77.410	ENSCANG00000035829	TUFM	81	77.049	Colobus_angolensis_palliatus
ENSNBRG00000006466	tufm	96	77.901	ENSCGRG00001022949	Tufm	81	77.534	Cricetulus_griseus_chok1gshd
ENSNBRG00000006466	tufm	95	52.762	ENSCGRG00000013193	-	77	52.603	Cricetulus_griseus_crigri
ENSNBRG00000006466	tufm	96	77.901	ENSCGRG00000001868	-	81	77.534	Cricetulus_griseus_crigri
ENSNBRG00000006466	tufm	96	86.464	ENSCSEG00000013841	tufm	85	86.027	Cynoglossus_semilaevis
ENSNBRG00000006466	tufm	96	97.238	ENSCVAG00000006251	tufm	100	83.184	Cyprinodon_variegatus
ENSNBRG00000006466	tufm	97	83.836	ENSDARG00000104173	tufm	99	72.422	Danio_rerio
ENSNBRG00000006466	tufm	96	77.135	ENSDNOG00000047636	TUFM	80	77.135	Dasypus_novemcinctus
ENSNBRG00000006466	tufm	89	66.667	ENSDORG00000023544	-	81	66.372	Dipodomys_ordii
ENSNBRG00000006466	tufm	95	69.638	FBgn0024556	mEFTu1	74	69.613	Drosophila_melanogaster
ENSNBRG00000006466	tufm	69	75.000	ENSETEG00000009601	TUFM	65	75.000	Echinops_telfairi
ENSNBRG00000006466	tufm	95	72.753	ENSEBUG00000015907	tufm	59	72.702	Eptatretus_burgeri
ENSNBRG00000006466	tufm	96	79.282	ENSEASG00005015477	TUFM	80	79.282	Equus_asinus_asinus
ENSNBRG00000006466	tufm	96	79.282	ENSECAG00000019763	TUFM	81	78.904	Equus_caballus
ENSNBRG00000006466	tufm	81	78.431	ENSEEUG00000001402	TUFM	78	77.994	Erinaceus_europaeus
ENSNBRG00000006466	tufm	96	91.160	ENSELUG00000013410	tufm	78	91.160	Esox_lucius
ENSNBRG00000006466	tufm	96	79.558	ENSFCAG00000003103	TUFM	52	79.558	Felis_catus
ENSNBRG00000006466	tufm	95	77.374	ENSFDAG00000010881	TUFM	99	75.238	Fukomys_damarensis
ENSNBRG00000006466	tufm	96	86.464	ENSFHEG00000020646	tufm	80	86.464	Fundulus_heteroclitus
ENSNBRG00000006466	tufm	96	89.779	ENSGMOG00000014616	tufm	100	76.682	Gadus_morhua
ENSNBRG00000006466	tufm	96	95.856	ENSGAFG00000004682	tufm	100	82.287	Gambusia_affinis
ENSNBRG00000006466	tufm	96	91.436	ENSGACG00000012961	tufm	82	90.959	Gasterosteus_aculeatus
ENSNBRG00000006466	tufm	96	81.215	ENSGAGG00000006132	TUFM	89	81.215	Gopherus_agassizii
ENSNBRG00000006466	tufm	96	77.686	ENSGGOG00000014136	TUFM	80	77.686	Gorilla_gorilla
ENSNBRG00000006466	tufm	96	99.448	ENSHBUG00000019031	tufm	79	99.448	Haplochromis_burtoni
ENSNBRG00000006466	tufm	96	77.410	ENSHGLG00000006613	TUFM	81	77.049	Heterocephalus_glaber_female
ENSNBRG00000006466	tufm	96	73.003	ENSHGLG00100004096	TUFM	80	73.003	Heterocephalus_glaber_male
ENSNBRG00000006466	tufm	95	93.296	ENSHCOG00000014418	tufm	84	92.308	Hippocampus_comes
ENSNBRG00000006466	tufm	96	87.293	ENSIPUG00000022457	tufm	100	75.112	Ictalurus_punctatus
ENSNBRG00000006466	tufm	90	53.488	ENSIPUG00000020682	-	91	55.660	Ictalurus_punctatus
ENSNBRG00000006466	tufm	96	79.558	ENSSTOG00000011837	TUFM	81	79.178	Ictidomys_tridecemlineatus
ENSNBRG00000006466	tufm	96	78.453	ENSJJAG00000011840	Tufm	81	78.082	Jaculus_jaculus
ENSNBRG00000006466	tufm	96	91.436	ENSKMAG00000009794	tufm	82	90.959	Kryptolebias_marmoratus
ENSNBRG00000006466	tufm	96	91.160	ENSLBEG00000023735	tufm	85	91.160	Labrus_bergylta
ENSNBRG00000006466	tufm	96	83.934	ENSLACG00000008242	TUFM	80	83.934	Latimeria_chalumnae
ENSNBRG00000006466	tufm	96	75.207	ENSLAFG00000028911	TUFM	81	74.863	Loxodonta_africana
ENSNBRG00000006466	tufm	96	77.410	ENSMFAG00000033739	TUFM	80	77.410	Macaca_fascicularis
ENSNBRG00000006466	tufm	96	77.410	ENSMMUG00000003303	TUFM	80	77.410	Macaca_mulatta
ENSNBRG00000006466	tufm	96	77.410	ENSMNEG00000006031	TUFM	80	77.410	Macaca_nemestrina
ENSNBRG00000006466	tufm	96	77.348	ENSMLEG00000042133	TUFM	80	77.348	Mandrillus_leucophaeus
ENSNBRG00000006466	tufm	96	91.989	ENSMAMG00000002053	tufm	100	78.924	Mastacembelus_armatus
ENSNBRG00000006466	tufm	96	99.171	ENSMZEG00005010857	tufm	93	84.978	Maylandia_zebra
ENSNBRG00000006466	tufm	96	78.453	ENSMAUG00000010490	Tufm	81	78.082	Mesocricetus_auratus
ENSNBRG00000006466	tufm	96	77.624	ENSMICG00000007650	TUFM	81	77.260	Microcebus_murinus
ENSNBRG00000006466	tufm	96	79.006	ENSMOCG00000010051	Tufm	81	78.630	Microtus_ochrogaster
ENSNBRG00000006466	tufm	96	91.160	ENSMMOG00000012344	tufm	80	91.160	Mola_mola
ENSNBRG00000006466	tufm	96	79.834	ENSMODG00000015564	TUFM	81	79.452	Monodelphis_domestica
ENSNBRG00000006466	tufm	96	90.028	ENSMALG00000020254	tufm	82	89.315	Monopterus_albus
ENSNBRG00000006466	tufm	96	78.453	MGP_CAROLIEiJ_G0030449	-	81	78.082	Mus_caroli
ENSNBRG00000006466	tufm	96	78.453	MGP_CAROLIEiJ_G0030448	-	98	79.825	Mus_caroli
ENSNBRG00000006466	tufm	96	78.453	ENSMUSG00000073838	Tufm	98	79.825	Mus_musculus
ENSNBRG00000006466	tufm	96	78.729	MGP_PahariEiJ_G0013658	-	98	79.825	Mus_pahari
ENSNBRG00000006466	tufm	96	78.729	MGP_PahariEiJ_G0013659	-	81	78.356	Mus_pahari
ENSNBRG00000006466	tufm	96	78.729	MGP_SPRETEiJ_G0031562	-	98	80.702	Mus_spretus
ENSNBRG00000006466	tufm	96	71.429	MGP_SPRETEiJ_G0031563	-	82	71.429	Mus_spretus
ENSNBRG00000006466	tufm	96	79.282	ENSMPUG00000012816	TUFM	97	78.904	Mustela_putorius_furo
ENSNBRG00000006466	tufm	96	77.901	ENSMLUG00000012335	-	81	77.534	Myotis_lucifugus
ENSNBRG00000006466	tufm	96	78.729	ENSNGAG00000008610	Tufm	81	78.356	Nannospalax_galili
ENSNBRG00000006466	tufm	96	71.978	ENSNLEG00000011063	TUFM	80	71.662	Nomascus_leucogenys
ENSNBRG00000006466	tufm	78	80.272	ENSMEUG00000011131	TUFM	86	79.798	Notamacropus_eugenii
ENSNBRG00000006466	tufm	84	78.481	ENSOPRG00000002318	-	69	78.481	Ochotona_princeps
ENSNBRG00000006466	tufm	96	99.171	ENSONIG00000019389	tufm	100	84.978	Oreochromis_niloticus
ENSNBRG00000006466	tufm	96	81.543	ENSOANG00000013114	TUFM	84	81.148	Ornithorhynchus_anatinus
ENSNBRG00000006466	tufm	96	79.006	ENSOCUG00000002683	TUFM	80	78.630	Oryctolagus_cuniculus
ENSNBRG00000006466	tufm	96	95.304	ENSORLG00000011497	tufm	100	81.614	Oryzias_latipes
ENSNBRG00000006466	tufm	96	95.580	ENSORLG00020013437	tufm	100	81.839	Oryzias_latipes_hni
ENSNBRG00000006466	tufm	96	95.580	ENSORLG00015003107	tufm	100	81.839	Oryzias_latipes_hsok
ENSNBRG00000006466	tufm	96	95.304	ENSOMEG00000016958	tufm	100	81.614	Oryzias_melastigma
ENSNBRG00000006466	tufm	96	78.177	ENSOGAG00000006875	TUFM	81	77.808	Otolemur_garnettii
ENSNBRG00000006466	tufm	96	79.006	ENSOARG00000002357	TUFM	88	78.630	Ovis_aries
ENSNBRG00000006466	tufm	96	77.686	ENSPPAG00000035168	TUFM	80	77.686	Pan_paniscus
ENSNBRG00000006466	tufm	96	79.558	ENSPPRG00000014248	TUFM	80	79.558	Panthera_pardus
ENSNBRG00000006466	tufm	96	79.558	ENSPTIG00000009980	TUFM	86	79.178	Panthera_tigris_altaica
ENSNBRG00000006466	tufm	96	77.686	ENSPTRG00000007939	TUFM	80	77.686	Pan_troglodytes
ENSNBRG00000006466	tufm	96	77.410	ENSPANG00000019624	TUFM	80	77.410	Papio_anubis
ENSNBRG00000006466	tufm	96	88.122	ENSPKIG00000023809	tufm	80	88.122	Paramormyrops_kingsleyae
ENSNBRG00000006466	tufm	84	78.413	ENSPSIG00000005302	TUFM	100	78.413	Pelodiscus_sinensis
ENSNBRG00000006466	tufm	96	91.436	ENSPMGG00000015631	tufm	86	91.436	Periophthalmus_magnuspinnatus
ENSNBRG00000006466	tufm	96	77.901	ENSPEMG00000012208	Tufm	81	77.534	Peromyscus_maniculatus_bairdii
ENSNBRG00000006466	tufm	96	78.453	ENSPCIG00000025208	TUFM	80	78.082	Phascolarctos_cinereus
ENSNBRG00000006466	tufm	96	92.265	ENSPFOG00000007043	tufm	81	92.521	Poecilia_formosa
ENSNBRG00000006466	tufm	96	91.436	ENSPLAG00000014372	tufm	81	91.690	Poecilia_latipinna
ENSNBRG00000006466	tufm	96	92.541	ENSPMEG00000014520	-	100	85.714	Poecilia_mexicana
ENSNBRG00000006466	tufm	96	92.541	ENSPMEG00000019508	tufm	81	92.798	Poecilia_mexicana
ENSNBRG00000006466	tufm	96	92.818	ENSPREG00000013913	tufm	100	79.596	Poecilia_reticulata
ENSNBRG00000006466	tufm	96	76.519	ENSPPYG00000007226	TUFM	80	76.519	Pongo_abelii
ENSNBRG00000006466	tufm	96	71.978	ENSPCAG00000015294	TUFM	80	71.978	Procavia_capensis
ENSNBRG00000006466	tufm	96	77.348	ENSPCOG00000012267	TUFM	80	77.348	Propithecus_coquereli
ENSNBRG00000006466	tufm	96	98.611	ENSPNYG00000008905	tufm	100	84.459	Pundamilia_nyererei
ENSNBRG00000006466	tufm	96	91.160	ENSPNAG00000018881	tufm	82	90.685	Pygocentrus_nattereri
ENSNBRG00000006466	tufm	96	78.729	ENSRNOG00000018604	Tufm	81	78.356	Rattus_norvegicus
ENSNBRG00000006466	tufm	68	77.043	ENSRBIG00000036713	-	94	77.043	Rhinopithecus_bieti
ENSNBRG00000006466	tufm	92	76.657	ENSRBIG00000042008	-	78	76.286	Rhinopithecus_bieti
ENSNBRG00000006466	tufm	96	77.686	ENSRROG00000036858	-	81	77.322	Rhinopithecus_roxellana
ENSNBRG00000006466	tufm	70	80.000	ENSRROG00000044977	-	59	75.576	Rhinopithecus_roxellana
ENSNBRG00000006466	tufm	93	60.452	YOR187W	TUF1	82	59.889	Saccharomyces_cerevisiae
ENSNBRG00000006466	tufm	96	75.967	ENSSBOG00000026542	TUFM	81	75.616	Saimiri_boliviensis_boliviensis
ENSNBRG00000006466	tufm	96	80.110	ENSSHAG00000012121	TUFM	84	80.110	Sarcophilus_harrisii
ENSNBRG00000006466	tufm	96	87.845	ENSSFOG00015013352	tufm	82	87.845	Scleropages_formosus
ENSNBRG00000006466	tufm	96	93.094	ENSSMAG00000010053	tufm	82	92.603	Scophthalmus_maximus
ENSNBRG00000006466	tufm	96	95.304	ENSSDUG00000016896	tufm	100	81.390	Seriola_dumerili
ENSNBRG00000006466	tufm	96	94.751	ENSSLDG00000006494	tufm	83	94.247	Seriola_lalandi_dorsalis
ENSNBRG00000006466	tufm	81	79.085	ENSSARG00000011228	TUFM	81	79.085	Sorex_araneus
ENSNBRG00000006466	tufm	96	70.685	ENSSPUG00000016312	TUFM	85	70.380	Sphenodon_punctatus
ENSNBRG00000006466	tufm	96	92.818	ENSSPAG00000009936	tufm	99	79.596	Stegastes_partitus
ENSNBRG00000006466	tufm	96	78.453	ENSSSCG00000007803	TUFM	81	78.082	Sus_scrofa
ENSNBRG00000006466	tufm	96	90.884	ENSTRUG00000008300	tufm	100	78.251	Takifugu_rubripes
ENSNBRG00000006466	tufm	96	74.862	ENSTBEG00000015029	TUFM	80	75.342	Tupaia_belangeri
ENSNBRG00000006466	tufm	71	78.571	ENSTTRG00000001980	-	98	78.067	Tursiops_truncatus
ENSNBRG00000006466	tufm	68	78.210	ENSTTRG00000005930	-	57	78.210	Tursiops_truncatus
ENSNBRG00000006466	tufm	96	79.614	ENSUAMG00000001471	TUFM	81	79.235	Ursus_americanus
ENSNBRG00000006466	tufm	96	79.890	ENSUMAG00000009341	TUFM	90	79.508	Ursus_maritimus
ENSNBRG00000006466	tufm	71	77.820	ENSVPAG00000009541	TUFM	98	77.323	Vicugna_pacos
ENSNBRG00000006466	tufm	96	79.282	ENSVVUG00000024170	TUFM	81	78.904	Vulpes_vulpes
ENSNBRG00000006466	tufm	96	52.603	ENSXETG00000028019	-	75	91.667	Xenopus_tropicalis
ENSNBRG00000006466	tufm	96	95.304	ENSXMAG00000011848	tufm	84	94.795	Xiphophorus_maculatus