EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006529 (Gene tree)
Gene ID: 102792438
Gene Symbol: smfn
Alias: zgc:73191
Full Name: oligoribonuclease%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 9742 bases
Position: chrJH422443.1:295557-305298
Accession: 102792438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008390	RNase_T	PF00929.24	9.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008634	-	567	XM_006806765	ENSNBRP00000008390	188 (aa)	XP_006806828	-

Gene Model

Click here to download ENSNBRG00000006529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006529	smfn	88	82.530	ENSG00000076043	REXO2	97	79.670	Homo_sapiens
ENSNBRG00000006529	smfn	60	86.842	ENSAPOG00000011971	smfn	98	86.842	Acanthochromis_polyacanthus
ENSNBRG00000006529	smfn	96	79.670	ENSAMEG00000013263	REXO2	77	79.670	Ailuropoda_melanoleuca
ENSNBRG00000006529	smfn	98	88.108	ENSACIG00000023553	smfn	100	88.108	Amphilophus_citrinellus
ENSNBRG00000006529	smfn	89	72.941	ENSAOCG00000011565	smfn	90	72.941	Amphiprion_ocellaris
ENSNBRG00000006529	smfn	97	89.674	ENSAPEG00000012435	smfn	68	89.674	Amphiprion_percula
ENSNBRG00000006529	smfn	98	86.022	ENSATEG00000015385	smfn	67	86.022	Anabas_testudineus
ENSNBRG00000006529	smfn	98	77.660	ENSAPLG00000005045	REXO2	93	77.660	Anas_platyrhynchos
ENSNBRG00000006529	smfn	89	73.214	ENSACAG00000011631	REXO2	78	73.214	Anolis_carolinensis
ENSNBRG00000006529	smfn	62	64.655	ENSANAG00000027457	-	95	59.854	Aotus_nancymaae
ENSNBRG00000006529	smfn	96	80.220	ENSANAG00000020834	REXO2	77	80.220	Aotus_nancymaae
ENSNBRG00000006529	smfn	96	96.685	ENSACLG00000024566	smfn	96	96.685	Astatotilapia_calliptera
ENSNBRG00000006529	smfn	96	79.670	ENSBTAG00000005843	REXO2	77	79.670	Bos_taurus
ENSNBRG00000006529	smfn	90	48.521	WBGene00007429	C08B6.8	92	55.556	Caenorhabditis_elegans
ENSNBRG00000006529	smfn	96	79.121	ENSCJAG00000012434	REXO2	77	79.121	Callithrix_jacchus
ENSNBRG00000006529	smfn	96	78.571	ENSCAFG00000013511	REXO2	77	78.571	Canis_familiaris
ENSNBRG00000006529	smfn	96	79.670	ENSCAFG00020002513	REXO2	77	79.670	Canis_lupus_dingo
ENSNBRG00000006529	smfn	96	79.670	ENSCHIG00000009264	REXO2	77	79.670	Capra_hircus
ENSNBRG00000006529	smfn	96	70.330	ENSTSYG00000027948	-	93	70.330	Carlito_syrichta
ENSNBRG00000006529	smfn	96	79.670	ENSTSYG00000002237	REXO2	77	79.670	Carlito_syrichta
ENSNBRG00000006529	smfn	96	80.220	ENSCAPG00000006093	REXO2	97	80.220	Cavia_aperea
ENSNBRG00000006529	smfn	96	80.220	ENSCPOG00000010548	REXO2	77	80.220	Cavia_porcellus
ENSNBRG00000006529	smfn	96	80.220	ENSCCAG00000034979	REXO2	77	80.220	Cebus_capucinus
ENSNBRG00000006529	smfn	88	82.530	ENSCATG00000015278	REXO2	77	79.670	Cercocebus_atys
ENSNBRG00000006529	smfn	96	80.220	ENSCLAG00000011195	REXO2	77	80.220	Chinchilla_lanigera
ENSNBRG00000006529	smfn	88	82.530	ENSCSAG00000002754	REXO2	77	79.670	Chlorocebus_sabaeus
ENSNBRG00000006529	smfn	96	78.571	ENSCHOG00000000642	-	77	78.571	Choloepus_hoffmanni
ENSNBRG00000006529	smfn	73	71.223	ENSCPBG00000009359	REXO2	96	71.223	Chrysemys_picta_bellii
ENSNBRG00000006529	smfn	88	62.048	ENSCING00000009858	-	80	62.048	Ciona_intestinalis
ENSNBRG00000006529	smfn	88	82.530	ENSCANG00000034756	REXO2	77	79.670	Colobus_angolensis_palliatus
ENSNBRG00000006529	smfn	96	79.670	ENSCGRG00001019814	-	77	79.670	Cricetulus_griseus_chok1gshd
ENSNBRG00000006529	smfn	98	77.660	ENSCGRG00001013673	-	92	77.660	Cricetulus_griseus_chok1gshd
ENSNBRG00000006529	smfn	96	76.923	ENSCGRG00001010922	-	89	76.923	Cricetulus_griseus_chok1gshd
ENSNBRG00000006529	smfn	96	79.670	ENSCGRG00000006235	Rexo2	77	79.670	Cricetulus_griseus_crigri
ENSNBRG00000006529	smfn	97	80.541	ENSCSEG00000007214	smfn	67	80.541	Cynoglossus_semilaevis
ENSNBRG00000006529	smfn	97	81.622	ENSCVAG00000012008	smfn	100	81.622	Cyprinodon_variegatus
ENSNBRG00000006529	smfn	98	81.522	ENSDARG00000009806	smfn	71	81.522	Danio_rerio
ENSNBRG00000006529	smfn	85	83.125	ENSDNOG00000046533	REXO2	77	83.125	Dasypus_novemcinctus
ENSNBRG00000006529	smfn	98	61.702	ENSDORG00000025142	-	81	61.702	Dipodomys_ordii
ENSNBRG00000006529	smfn	96	80.220	ENSDORG00000011255	Rexo2	77	80.220	Dipodomys_ordii
ENSNBRG00000006529	smfn	89	51.497	FBgn0039115	CG10214	79	51.497	Drosophila_melanogaster
ENSNBRG00000006529	smfn	92	72.254	ENSEBUG00000013964	REXO2	59	72.254	Eptatretus_burgeri
ENSNBRG00000006529	smfn	96	79.670	ENSEASG00005006674	REXO2	77	79.670	Equus_asinus_asinus
ENSNBRG00000006529	smfn	96	79.670	ENSECAG00000005988	REXO2	77	79.670	Equus_caballus
ENSNBRG00000006529	smfn	96	79.781	ENSELUG00000020072	smfn	63	79.781	Esox_lucius
ENSNBRG00000006529	smfn	96	79.670	ENSFCAG00000018632	REXO2	77	79.670	Felis_catus
ENSNBRG00000006529	smfn	96	78.571	ENSFALG00000010044	REXO2	90	78.571	Ficedula_albicollis
ENSNBRG00000006529	smfn	96	80.220	ENSFDAG00000011764	REXO2	77	80.220	Fukomys_damarensis
ENSNBRG00000006529	smfn	91	81.034	ENSGMOG00000006370	smfn	90	81.034	Gadus_morhua
ENSNBRG00000006529	smfn	98	78.191	ENSGALG00000035980	REXO2	81	78.191	Gallus_gallus
ENSNBRG00000006529	smfn	95	84.444	ENSGAFG00000015349	smfn	64	84.444	Gambusia_affinis
ENSNBRG00000006529	smfn	90	85.882	ENSGACG00000020096	smfn	84	85.882	Gasterosteus_aculeatus
ENSNBRG00000006529	smfn	96	76.923	ENSGAGG00000021126	REXO2	79	76.923	Gopherus_agassizii
ENSNBRG00000006529	smfn	88	82.530	ENSGGOG00000023267	REXO2	77	79.670	Gorilla_gorilla
ENSNBRG00000006529	smfn	69	94.615	ENSHBUG00000020097	REXO2	64	94.615	Haplochromis_burtoni
ENSNBRG00000006529	smfn	96	79.670	ENSHGLG00000013556	REXO2	77	79.670	Heterocephalus_glaber_female
ENSNBRG00000006529	smfn	96	80.220	ENSHGLG00100005257	REXO2	77	80.220	Heterocephalus_glaber_male
ENSNBRG00000006529	smfn	95	82.584	ENSHCOG00000007122	smfn	98	82.584	Hippocampus_comes
ENSNBRG00000006529	smfn	96	82.967	ENSIPUG00000020440	rexo2	67	82.967	Ictalurus_punctatus
ENSNBRG00000006529	smfn	99	78.947	ENSSTOG00000012465	REXO2	79	78.947	Ictidomys_tridecemlineatus
ENSNBRG00000006529	smfn	96	56.044	ENSJJAG00000022605	-	71	56.044	Jaculus_jaculus
ENSNBRG00000006529	smfn	96	80.220	ENSJJAG00000013710	-	77	80.220	Jaculus_jaculus
ENSNBRG00000006529	smfn	95	86.111	ENSKMAG00000016795	smfn	64	86.111	Kryptolebias_marmoratus
ENSNBRG00000006529	smfn	99	81.383	ENSLBEG00000006021	smfn	99	81.383	Labrus_bergylta
ENSNBRG00000006529	smfn	98	70.430	ENSLACG00000018623	REXO2	77	70.430	Latimeria_chalumnae
ENSNBRG00000006529	smfn	98	81.183	ENSLOCG00000002389	smfn	89	81.183	Lepisosteus_oculatus
ENSNBRG00000006529	smfn	96	79.670	ENSLAFG00000012451	REXO2	77	79.670	Loxodonta_africana
ENSNBRG00000006529	smfn	88	82.530	ENSMFAG00000041155	REXO2	77	79.670	Macaca_fascicularis
ENSNBRG00000006529	smfn	88	82.530	ENSMMUG00000012269	REXO2	77	79.670	Macaca_mulatta
ENSNBRG00000006529	smfn	88	82.530	ENSMNEG00000033379	REXO2	77	79.670	Macaca_nemestrina
ENSNBRG00000006529	smfn	88	82.530	ENSMLEG00000036571	REXO2	77	79.670	Mandrillus_leucophaeus
ENSNBRG00000006529	smfn	98	87.568	ENSMAMG00000021209	smfn	67	87.568	Mastacembelus_armatus
ENSNBRG00000006529	smfn	98	94.565	ENSMZEG00005020730	REXO2	71	94.565	Maylandia_zebra
ENSNBRG00000006529	smfn	98	94.565	ENSMZEG00005023224	-	71	94.565	Maylandia_zebra
ENSNBRG00000006529	smfn	84	76.687	ENSMGAG00000003026	REXO2	100	76.687	Meleagris_gallopavo
ENSNBRG00000006529	smfn	96	79.670	ENSMAUG00000014576	Rexo2	77	79.670	Mesocricetus_auratus
ENSNBRG00000006529	smfn	96	80.220	ENSMICG00000010094	REXO2	77	80.220	Microcebus_murinus
ENSNBRG00000006529	smfn	96	79.670	ENSMOCG00000009016	Rexo2	77	79.670	Microtus_ochrogaster
ENSNBRG00000006529	smfn	98	81.720	ENSMMOG00000006430	smfn	69	81.720	Mola_mola
ENSNBRG00000006529	smfn	96	80.769	ENSMODG00000013913	REXO2	77	80.769	Monodelphis_domestica
ENSNBRG00000006529	smfn	98	83.333	ENSMALG00000018130	smfn	53	83.333	Monopterus_albus
ENSNBRG00000006529	smfn	96	78.571	MGP_CAROLIEiJ_G0032166	Rexo2	77	78.571	Mus_caroli
ENSNBRG00000006529	smfn	96	78.571	ENSMUSG00000032026	Rexo2	77	78.571	Mus_musculus
ENSNBRG00000006529	smfn	96	78.571	MGP_PahariEiJ_G0015034	Rexo2	77	78.571	Mus_pahari
ENSNBRG00000006529	smfn	96	78.571	MGP_SPRETEiJ_G0033305	Rexo2	77	78.571	Mus_spretus
ENSNBRG00000006529	smfn	96	79.670	ENSMPUG00000003947	REXO2	77	79.670	Mustela_putorius_furo
ENSNBRG00000006529	smfn	96	79.121	ENSMLUG00000009030	REXO2	77	79.121	Myotis_lucifugus
ENSNBRG00000006529	smfn	96	80.769	ENSNGAG00000008819	Rexo2	89	80.769	Nannospalax_galili
ENSNBRG00000006529	smfn	88	82.530	ENSNLEG00000029745	REXO2	77	79.670	Nomascus_leucogenys
ENSNBRG00000006529	smfn	96	80.769	ENSMEUG00000011558	REXO2	83	80.769	Notamacropus_eugenii
ENSNBRG00000006529	smfn	67	75.781	ENSOPRG00000011076	REXO2	54	75.781	Ochotona_princeps
ENSNBRG00000006529	smfn	96	80.220	ENSODEG00000009750	-	97	80.220	Octodon_degus
ENSNBRG00000006529	smfn	86	64.596	ENSODEG00000016046	-	79	64.596	Octodon_degus
ENSNBRG00000006529	smfn	98	94.565	ENSONIG00000001954	smfn	80	94.565	Oreochromis_niloticus
ENSNBRG00000006529	smfn	98	78.191	ENSOANG00000001754	REXO2	79	78.191	Ornithorhynchus_anatinus
ENSNBRG00000006529	smfn	100	77.368	ENSOCUG00000004274	REXO2	76	77.368	Oryctolagus_cuniculus
ENSNBRG00000006529	smfn	96	84.066	ENSORLG00000005119	smfn	59	84.066	Oryzias_latipes
ENSNBRG00000006529	smfn	96	84.615	ENSORLG00020010121	smfn	59	84.615	Oryzias_latipes_hni
ENSNBRG00000006529	smfn	95	84.530	ENSORLG00015015699	smfn	59	84.530	Oryzias_latipes_hsok
ENSNBRG00000006529	smfn	73	81.295	ENSOMEG00000008940	-	97	81.295	Oryzias_melastigma
ENSNBRG00000006529	smfn	96	81.868	ENSOMEG00000016878	REXO2	67	81.868	Oryzias_melastigma
ENSNBRG00000006529	smfn	96	80.220	ENSOGAG00000016860	REXO2	77	80.220	Otolemur_garnettii
ENSNBRG00000006529	smfn	96	79.670	ENSOARG00000001040	REXO2	85	79.670	Ovis_aries
ENSNBRG00000006529	smfn	88	82.530	ENSPPAG00000039849	REXO2	77	79.670	Pan_paniscus
ENSNBRG00000006529	smfn	96	79.670	ENSPPRG00000007255	REXO2	77	79.670	Panthera_pardus
ENSNBRG00000006529	smfn	96	79.670	ENSPTIG00000015578	REXO2	97	79.670	Panthera_tigris_altaica
ENSNBRG00000006529	smfn	88	82.530	ENSPTRG00000004306	REXO2	77	79.670	Pan_troglodytes
ENSNBRG00000006529	smfn	88	82.530	ENSPANG00000010675	REXO2	77	79.670	Papio_anubis
ENSNBRG00000006529	smfn	97	81.622	ENSPKIG00000000911	smfn	77	84.459	Paramormyrops_kingsleyae
ENSNBRG00000006529	smfn	96	78.022	ENSPSIG00000005151	REXO2	66	78.022	Pelodiscus_sinensis
ENSNBRG00000006529	smfn	98	80.851	ENSPMGG00000007442	smfn	100	80.851	Periophthalmus_magnuspinnatus
ENSNBRG00000006529	smfn	90	68.208	ENSPEMG00000001421	Rexo2	76	68.208	Peromyscus_maniculatus_bairdii
ENSNBRG00000006529	smfn	62	76.724	ENSPMAG00000001022	REXO2	100	76.724	Petromyzon_marinus
ENSNBRG00000006529	smfn	98	79.894	ENSPCIG00000011227	REXO2	50	79.894	Phascolarctos_cinereus
ENSNBRG00000006529	smfn	98	83.333	ENSPFOG00000017861	smfn	91	83.696	Poecilia_formosa
ENSNBRG00000006529	smfn	79	85.235	ENSPLAG00000007327	REXO2	58	85.235	Poecilia_latipinna
ENSNBRG00000006529	smfn	98	83.871	ENSPMEG00000017343	smfn	66	83.871	Poecilia_mexicana
ENSNBRG00000006529	smfn	95	84.530	ENSPREG00000016438	smfn	65	84.530	Poecilia_reticulata
ENSNBRG00000006529	smfn	88	82.530	ENSPPYG00000003895	REXO2	77	79.670	Pongo_abelii
ENSNBRG00000006529	smfn	96	79.121	ENSPCAG00000005237	REXO2	77	79.121	Procavia_capensis
ENSNBRG00000006529	smfn	78	83.562	ENSPCOG00000027639	REXO2	75	83.562	Propithecus_coquereli
ENSNBRG00000006529	smfn	81	77.922	ENSPVAG00000005295	REXO2	64	77.922	Pteropus_vampyrus
ENSNBRG00000006529	smfn	98	94.022	ENSPNYG00000018401	smfn	71	94.022	Pundamilia_nyererei
ENSNBRG00000006529	smfn	96	80.769	ENSPNAG00000005290	smfn	67	80.769	Pygocentrus_nattereri
ENSNBRG00000006529	smfn	96	78.571	ENSRNOG00000018939	Rexo2	77	78.571	Rattus_norvegicus
ENSNBRG00000006529	smfn	88	82.530	ENSRBIG00000037809	REXO2	77	79.670	Rhinopithecus_bieti
ENSNBRG00000006529	smfn	88	82.530	ENSRROG00000038928	REXO2	77	79.670	Rhinopithecus_roxellana
ENSNBRG00000006529	smfn	95	42.246	YLR059C	REX2	70	42.246	Saccharomyces_cerevisiae
ENSNBRG00000006529	smfn	96	80.220	ENSSBOG00000028651	REXO2	77	80.220	Saimiri_boliviensis_boliviensis
ENSNBRG00000006529	smfn	96	80.769	ENSSHAG00000008008	REXO2	78	80.769	Sarcophilus_harrisii
ENSNBRG00000006529	smfn	96	80.220	ENSSFOG00015022414	smfn	97	80.220	Scleropages_formosus
ENSNBRG00000006529	smfn	95	86.188	ENSSMAG00000003168	smfn	66	86.188	Scophthalmus_maximus
ENSNBRG00000006529	smfn	99	87.766	ENSSDUG00000015624	smfn	66	87.766	Seriola_dumerili
ENSNBRG00000006529	smfn	99	86.702	ENSSLDG00000014005	smfn	66	86.702	Seriola_lalandi_dorsalis
ENSNBRG00000006529	smfn	67	86.508	ENSSARG00000014530	REXO2	99	86.508	Sorex_araneus
ENSNBRG00000006529	smfn	84	71.250	ENSSPUG00000006005	REXO2	86	71.250	Sphenodon_punctatus
ENSNBRG00000006529	smfn	95	90.055	ENSSPAG00000001530	smfn	97	90.055	Stegastes_partitus
ENSNBRG00000006529	smfn	96	79.670	ENSSSCG00000015056	REXO2	77	79.670	Sus_scrofa
ENSNBRG00000006529	smfn	96	77.473	ENSTGUG00000000121	REXO2	78	77.473	Taeniopygia_guttata
ENSNBRG00000006529	smfn	95	84.916	ENSTRUG00000021529	smfn	66	84.916	Takifugu_rubripes
ENSNBRG00000006529	smfn	95	86.188	ENSTNIG00000008588	smfn	80	86.188	Tetraodon_nigroviridis
ENSNBRG00000006529	smfn	96	80.220	ENSTBEG00000017040	REXO2	77	80.220	Tupaia_belangeri
ENSNBRG00000006529	smfn	96	79.121	ENSTTRG00000014928	REXO2	77	79.121	Tursiops_truncatus
ENSNBRG00000006529	smfn	96	73.077	ENSUAMG00000019096	REXO2	75	82.877	Ursus_americanus
ENSNBRG00000006529	smfn	96	79.670	ENSUMAG00000003770	REXO2	77	79.670	Ursus_maritimus
ENSNBRG00000006529	smfn	88	62.651	ENSVPAG00000006301	REXO2	97	60.989	Vicugna_pacos
ENSNBRG00000006529	smfn	96	79.670	ENSVVUG00000025223	REXO2	77	79.670	Vulpes_vulpes
ENSNBRG00000006529	smfn	96	79.781	ENSXETG00000012648	rexo2	75	79.781	Xenopus_tropicalis
ENSNBRG00000006529	smfn	97	81.720	ENSXCOG00000018838	smfn	95	81.720	Xiphophorus_couchianus
ENSNBRG00000006529	smfn	97	81.720	ENSXMAG00000021125	smfn	60	81.720	Xiphophorus_maculatus