EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006580 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: polymerase (RNA) II (DNA directed) polypeptide J
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1749 bases
Position: chrJH422357.1:129432-131180
Accession: ZDB-GENE-050522-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008466	RNA_pol_L_2	PF13656.6	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008711	-	386	-	ENSNBRP00000008466	128 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000006580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006580	polr2j	59	90.789	ENSG00000228049	POLR2J2	66	90.789	Homo_sapiens
ENSNBRG00000006580	polr2j	59	92.105	ENSG00000005075	POLR2J	66	90.909	Homo_sapiens
ENSNBRG00000006580	polr2j	59	97.403	ENSAPOG00000019538	polr2j	66	97.403	Acanthochromis_polyacanthus
ENSNBRG00000006580	polr2j	59	90.909	ENSAMEG00000015480	-	61	90.909	Ailuropoda_melanoleuca
ENSNBRG00000006580	polr2j	56	97.297	ENSACIG00000014549	POLR2J2	66	97.297	Amphilophus_citrinellus
ENSNBRG00000006580	polr2j	59	97.403	ENSAOCG00000006937	polr2j	66	97.403	Amphiprion_ocellaris
ENSNBRG00000006580	polr2j	59	97.403	ENSAPEG00000021761	polr2j	66	97.403	Amphiprion_percula
ENSNBRG00000006580	polr2j	59	97.403	ENSATEG00000013312	-	66	97.403	Anabas_testudineus
ENSNBRG00000006580	polr2j	59	97.403	ENSATEG00000009731	polr2j	66	97.403	Anabas_testudineus
ENSNBRG00000006580	polr2j	59	83.117	ENSACAG00000000251	POLR2J	66	83.117	Anolis_carolinensis
ENSNBRG00000006580	polr2j	59	97.403	ENSACLG00000014564	polr2j	66	97.403	Astatotilapia_calliptera
ENSNBRG00000006580	polr2j	59	94.805	ENSAMXG00000007517	polr2j	66	94.805	Astyanax_mexicanus
ENSNBRG00000006580	polr2j	59	59.211	ENSBTAG00000048046	-	60	59.211	Bos_taurus
ENSNBRG00000006580	polr2j	59	72.368	WBGene00012187	rpb-11	62	72.368	Caenorhabditis_elegans
ENSNBRG00000006580	polr2j	59	90.909	ENSCJAG00000016203	-	66	90.909	Callithrix_jacchus
ENSNBRG00000006580	polr2j	59	90.909	ENSCAFG00000013683	-	66	90.909	Canis_familiaris
ENSNBRG00000006580	polr2j	59	90.909	ENSCPOG00000001401	-	66	90.909	Cavia_porcellus
ENSNBRG00000006580	polr2j	59	60.000	ENSCATG00000016595	-	54	70.588	Cercocebus_atys
ENSNBRG00000006580	polr2j	59	90.909	ENSCLAG00000005238	-	66	90.909	Chinchilla_lanigera
ENSNBRG00000006580	polr2j	59	90.909	ENSCSAG00000018092	-	66	90.909	Chlorocebus_sabaeus
ENSNBRG00000006580	polr2j	59	83.117	ENSCING00000020531	-	66	83.117	Ciona_intestinalis
ENSNBRG00000006580	polr2j	59	80.519	ENSCSAVG00000006948	-	66	80.519	Ciona_savignyi
ENSNBRG00000006580	polr2j	59	90.909	ENSCGRG00001012814	Polr2j	66	90.909	Cricetulus_griseus_chok1gshd
ENSNBRG00000006580	polr2j	59	94.805	ENSCSEG00000020352	polr2j	66	94.805	Cynoglossus_semilaevis
ENSNBRG00000006580	polr2j	59	97.403	ENSCVAG00000014267	polr2j	66	97.403	Cyprinodon_variegatus
ENSNBRG00000006580	polr2j	59	93.506	ENSDARG00000035146	polr2j	66	93.506	Danio_rerio
ENSNBRG00000006580	polr2j	59	90.909	ENSDORG00000005934	Polr2j	66	90.909	Dipodomys_ordii
ENSNBRG00000006580	polr2j	59	79.221	FBgn0032634	Rpb11	66	79.221	Drosophila_melanogaster
ENSNBRG00000006580	polr2j	59	56.000	ENSEBUG00000016100	polr2j	54	56.000	Eptatretus_burgeri
ENSNBRG00000006580	polr2j	59	90.909	ENSEASG00005016864	-	66	90.909	Equus_asinus_asinus
ENSNBRG00000006580	polr2j	59	94.805	ENSELUG00000012822	polr2j	66	94.805	Esox_lucius
ENSNBRG00000006580	polr2j	59	90.909	ENSFCAG00000000377	-	66	90.909	Felis_catus
ENSNBRG00000006580	polr2j	59	90.909	ENSFALG00000009523	POLR2J	66	90.909	Ficedula_albicollis
ENSNBRG00000006580	polr2j	59	90.909	ENSFDAG00000010507	-	66	90.909	Fukomys_damarensis
ENSNBRG00000006580	polr2j	59	97.403	ENSFHEG00000006625	polr2j	66	97.403	Fundulus_heteroclitus
ENSNBRG00000006580	polr2j	59	94.805	ENSGMOG00000018207	polr2j	66	94.805	Gadus_morhua
ENSNBRG00000006580	polr2j	59	90.909	ENSGALG00000030808	-	66	90.909	Gallus_gallus
ENSNBRG00000006580	polr2j	59	97.403	ENSGAFG00000019555	polr2j	66	97.403	Gambusia_affinis
ENSNBRG00000006580	polr2j	59	97.403	ENSGACG00000003310	polr2j	66	97.403	Gasterosteus_aculeatus
ENSNBRG00000006580	polr2j	59	97.403	ENSHBUG00000008467	polr2j	66	97.403	Haplochromis_burtoni
ENSNBRG00000006580	polr2j	59	90.909	ENSHGLG00000013598	POLR2J	70	90.909	Heterocephalus_glaber_female
ENSNBRG00000006580	polr2j	59	90.909	ENSHGLG00100011242	POLR2J	70	90.909	Heterocephalus_glaber_male
ENSNBRG00000006580	polr2j	59	94.805	ENSIPUG00000023960	polr2j	66	94.805	Ictalurus_punctatus
ENSNBRG00000006580	polr2j	59	90.909	ENSSTOG00000006377	POLR2J	69	90.909	Ictidomys_tridecemlineatus
ENSNBRG00000006580	polr2j	59	90.909	ENSJJAG00000013854	-	66	90.909	Jaculus_jaculus
ENSNBRG00000006580	polr2j	59	88.312	ENSJJAG00000018834	-	66	88.312	Jaculus_jaculus
ENSNBRG00000006580	polr2j	59	97.403	ENSKMAG00000014581	polr2j	52	97.403	Kryptolebias_marmoratus
ENSNBRG00000006580	polr2j	59	96.104	ENSLBEG00000005885	polr2j	66	96.104	Labrus_bergylta
ENSNBRG00000006580	polr2j	59	94.805	ENSLOCG00000001885	polr2j	58	94.805	Lepisosteus_oculatus
ENSNBRG00000006580	polr2j	59	90.909	ENSLAFG00000021507	-	66	90.909	Loxodonta_africana
ENSNBRG00000006580	polr2j	59	90.909	ENSMMUG00000012019	POLR2J	59	90.909	Macaca_mulatta
ENSNBRG00000006580	polr2j	59	96.104	ENSMAMG00000009374	polr2j	66	96.104	Mastacembelus_armatus
ENSNBRG00000006580	polr2j	59	97.403	ENSMZEG00005011932	polr2j	66	97.403	Maylandia_zebra
ENSNBRG00000006580	polr2j	59	90.909	ENSMGAG00000003534	POLR2J	66	90.909	Meleagris_gallopavo
ENSNBRG00000006580	polr2j	59	90.909	ENSMAUG00000013049	Polr2j	66	90.909	Mesocricetus_auratus
ENSNBRG00000006580	polr2j	59	90.909	ENSMOCG00000001294	Polr2j	66	90.909	Microtus_ochrogaster
ENSNBRG00000006580	polr2j	59	96.104	ENSMMOG00000013265	polr2j	66	96.104	Mola_mola
ENSNBRG00000006580	polr2j	59	90.909	ENSMODG00000013617	-	60	90.909	Monodelphis_domestica
ENSNBRG00000006580	polr2j	59	96.104	ENSMALG00000020749	polr2j	66	96.104	Monopterus_albus
ENSNBRG00000006580	polr2j	59	90.909	MGP_CAROLIEiJ_G0027851	Polr2j	69	90.909	Mus_caroli
ENSNBRG00000006580	polr2j	59	90.909	ENSMUSG00000039771	Polr2j	69	90.909	Mus_musculus
ENSNBRG00000006580	polr2j	59	90.909	MGP_PahariEiJ_G0024434	Polr2j	66	90.909	Mus_pahari
ENSNBRG00000006580	polr2j	59	90.909	MGP_SPRETEiJ_G0028853	Polr2j	69	90.909	Mus_spretus
ENSNBRG00000006580	polr2j	59	90.909	ENSMLUG00000010467	POLR2J	66	90.909	Myotis_lucifugus
ENSNBRG00000006580	polr2j	59	90.909	ENSNGAG00000023412	Polr2j	69	90.909	Nannospalax_galili
ENSNBRG00000006580	polr2j	59	90.909	ENSODEG00000015648	-	69	90.909	Octodon_degus
ENSNBRG00000006580	polr2j	59	67.105	ENSODEG00000008559	-	63	67.105	Octodon_degus
ENSNBRG00000006580	polr2j	59	97.403	ENSONIG00000000259	polr2j	66	97.403	Oreochromis_niloticus
ENSNBRG00000006580	polr2j	59	87.013	ENSOANG00000020912	POLR2J	66	87.013	Ornithorhynchus_anatinus
ENSNBRG00000006580	polr2j	59	90.909	ENSOCUG00000023609	POLR2J	61	90.909	Oryctolagus_cuniculus
ENSNBRG00000006580	polr2j	59	97.403	ENSORLG00000029046	polr2j	55	97.403	Oryzias_latipes
ENSNBRG00000006580	polr2j	59	97.403	ENSORLG00020007625	polr2j	55	97.403	Oryzias_latipes_hni
ENSNBRG00000006580	polr2j	59	97.403	ENSORLG00015003457	polr2j	55	97.403	Oryzias_latipes_hsok
ENSNBRG00000006580	polr2j	59	97.403	ENSOMEG00000002097	polr2j	66	97.403	Oryzias_melastigma
ENSNBRG00000006580	polr2j	59	66.667	ENSOGAG00000008250	-	61	66.667	Otolemur_garnettii
ENSNBRG00000006580	polr2j	59	90.909	ENSOARG00000014204	-	64	90.909	Ovis_aries
ENSNBRG00000006580	polr2j	59	90.909	ENSPPRG00000012439	-	66	90.909	Panthera_pardus
ENSNBRG00000006580	polr2j	56	79.452	ENSPTIG00000018714	-	60	87.097	Panthera_tigris_altaica
ENSNBRG00000006580	polr2j	59	97.403	ENSPMGG00000021256	polr2j	66	97.403	Periophthalmus_magnuspinnatus
ENSNBRG00000006580	polr2j	59	90.909	ENSPEMG00000015733	Polr2j	66	90.909	Peromyscus_maniculatus_bairdii
ENSNBRG00000006580	polr2j	59	90.909	ENSPCIG00000009026	-	66	90.909	Phascolarctos_cinereus
ENSNBRG00000006580	polr2j	59	97.403	ENSPFOG00000012001	polr2j	65	97.403	Poecilia_formosa
ENSNBRG00000006580	polr2j	59	97.403	ENSPLAG00000014075	polr2j	66	97.403	Poecilia_latipinna
ENSNBRG00000006580	polr2j	59	97.403	ENSPMEG00000020585	polr2j	66	97.403	Poecilia_mexicana
ENSNBRG00000006580	polr2j	59	97.403	ENSPREG00000015255	polr2j	66	97.403	Poecilia_reticulata
ENSNBRG00000006580	polr2j	59	90.909	ENSPCOG00000024573	-	66	90.909	Propithecus_coquereli
ENSNBRG00000006580	polr2j	59	97.403	ENSPNYG00000014832	polr2j	66	97.403	Pundamilia_nyererei
ENSNBRG00000006580	polr2j	59	93.506	ENSPNAG00000016595	polr2j	66	93.506	Pygocentrus_nattereri
ENSNBRG00000006580	polr2j	59	90.909	ENSRNOG00000001430	Polr2j	66	90.909	Rattus_norvegicus
ENSNBRG00000006580	polr2j	59	90.909	ENSSBOG00000025579	-	66	90.909	Saimiri_boliviensis_boliviensis
ENSNBRG00000006580	polr2j	59	94.805	ENSSFOG00015003371	polr2j	58	94.805	Scleropages_formosus
ENSNBRG00000006580	polr2j	59	97.403	ENSSMAG00000006729	polr2j	66	97.403	Scophthalmus_maximus
ENSNBRG00000006580	polr2j	59	97.403	ENSSDUG00000018490	polr2j	66	97.403	Seriola_dumerili
ENSNBRG00000006580	polr2j	59	97.403	ENSSLDG00000022354	polr2j	66	97.403	Seriola_lalandi_dorsalis
ENSNBRG00000006580	polr2j	59	90.909	ENSSPUG00000010802	-	66	90.909	Sphenodon_punctatus
ENSNBRG00000006580	polr2j	59	97.403	ENSSPAG00000021953	polr2j	66	97.403	Stegastes_partitus
ENSNBRG00000006580	polr2j	59	76.316	ENSSSCG00000003703	-	54	76.316	Sus_scrofa
ENSNBRG00000006580	polr2j	59	90.909	ENSSSCG00000007688	-	66	90.909	Sus_scrofa
ENSNBRG00000006580	polr2j	59	96.104	ENSTRUG00000020842	polr2j	66	96.104	Takifugu_rubripes
ENSNBRG00000006580	polr2j	59	94.805	ENSTNIG00000002994	polr2j	66	94.805	Tetraodon_nigroviridis
ENSNBRG00000006580	polr2j	59	70.130	ENSTBEG00000005797	-	51	70.130	Tupaia_belangeri
ENSNBRG00000006580	polr2j	59	90.909	ENSUAMG00000011310	-	66	90.909	Ursus_americanus
ENSNBRG00000006580	polr2j	59	90.909	ENSUMAG00000012594	-	66	90.909	Ursus_maritimus
ENSNBRG00000006580	polr2j	59	89.610	ENSXETG00000001108	polr2j	66	89.610	Xenopus_tropicalis
ENSNBRG00000006580	polr2j	59	97.403	ENSXMAG00000012422	polr2j	66	97.403	Xiphophorus_maculatus