EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006585 (Gene tree)
Gene ID: 102785021
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: PAB-dependent poly(A)-specific ribonuclease subunit 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 11874 bases
Position: chrJH422304.1:3319599-3331472
Accession: 102785021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008573	RNase_T	PF00929.24	6.2e-18	1	1
ENSNBRP00000008561	RNase_T	PF00929.24	6.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008812	-	3396	XM_006794302	ENSNBRP00000008561	1131 (aa)	XP_006794365	-
ENSNBRT00000008824	-	3315	-	ENSNBRP00000008573	1104 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000006585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006585	pan2	99	97.260	ENSAPOG00000022955	pan2	92	97.260	Acanthochromis_polyacanthus
ENSNBRG00000006585	pan2	99	86.818	ENSAMEG00000003824	PAN2	92	86.818	Ailuropoda_melanoleuca
ENSNBRG00000006585	pan2	99	87.002	ENSACIG00000013079	pan2	99	87.002	Amphilophus_citrinellus
ENSNBRG00000006585	pan2	95	74.634	ENSACIG00000012858	PAN2	90	74.634	Amphilophus_citrinellus
ENSNBRG00000006585	pan2	99	97.209	ENSAOCG00000022334	pan2	92	97.209	Amphiprion_ocellaris
ENSNBRG00000006585	pan2	99	97.260	ENSAPEG00000022760	pan2	92	97.260	Amphiprion_percula
ENSNBRG00000006585	pan2	98	97.209	ENSATEG00000024030	pan2	92	97.209	Anabas_testudineus
ENSNBRG00000006585	pan2	89	95.000	ENSAPLG00000005195	PAN2	90	95.000	Anas_platyrhynchos
ENSNBRG00000006585	pan2	96	86.818	ENSACAG00000007067	PAN2	90	86.818	Anolis_carolinensis
ENSNBRG00000006585	pan2	99	87.273	ENSANAG00000036468	PAN2	92	87.273	Aotus_nancymaae
ENSNBRG00000006585	pan2	99	100.000	ENSACLG00000023674	pan2	92	100.000	Astatotilapia_calliptera
ENSNBRG00000006585	pan2	98	65.388	ENSACLG00000023821	pan2	99	60.660	Astatotilapia_calliptera
ENSNBRG00000006585	pan2	98	93.750	ENSAMXG00000005418	pan2	90	93.750	Astyanax_mexicanus
ENSNBRG00000006585	pan2	99	86.364	ENSBTAG00000004376	PAN2	92	86.364	Bos_taurus
ENSNBRG00000006585	pan2	74	47.500	WBGene00017951	panl-2	73	47.500	Caenorhabditis_elegans
ENSNBRG00000006585	pan2	99	86.818	ENSCJAG00000011141	PAN2	92	86.818	Callithrix_jacchus
ENSNBRG00000006585	pan2	99	86.818	ENSCAFG00000000119	PAN2	92	86.818	Canis_familiaris
ENSNBRG00000006585	pan2	98	88.095	ENSCAFG00020024865	PAN2	92	86.818	Canis_lupus_dingo
ENSNBRG00000006585	pan2	97	89.500	ENSCHIG00000026935	PAN2	90	89.500	Capra_hircus
ENSNBRG00000006585	pan2	97	89.500	ENSTSYG00000006927	PAN2	90	89.500	Carlito_syrichta
ENSNBRG00000006585	pan2	99	86.364	ENSCPOG00000014918	PAN2	92	86.364	Cavia_porcellus
ENSNBRG00000006585	pan2	99	86.818	ENSCCAG00000036637	PAN2	92	86.818	Cebus_capucinus
ENSNBRG00000006585	pan2	97	89.500	ENSCATG00000045076	PAN2	90	89.500	Cercocebus_atys
ENSNBRG00000006585	pan2	97	89.055	ENSCLAG00000011700	PAN2	90	89.055	Chinchilla_lanigera
ENSNBRG00000006585	pan2	99	86.818	ENSCSAG00000005173	PAN2	92	86.818	Chlorocebus_sabaeus
ENSNBRG00000006585	pan2	89	94.286	ENSCPBG00000014029	PAN2	90	94.286	Chrysemys_picta_bellii
ENSNBRG00000006585	pan2	86	70.352	ENSCSAVG00000003833	-	89	70.352	Ciona_savignyi
ENSNBRG00000006585	pan2	99	68.421	ENSCANG00000017798	PAN2	100	68.421	Colobus_angolensis_palliatus
ENSNBRG00000006585	pan2	97	89.055	ENSCGRG00001019707	Pan2	91	89.055	Cricetulus_griseus_chok1gshd
ENSNBRG00000006585	pan2	97	89.055	ENSCGRG00000009996	Pan2	91	89.055	Cricetulus_griseus_crigri
ENSNBRG00000006585	pan2	100	85.356	ENSCSEG00000021529	pan2	100	85.272	Cynoglossus_semilaevis
ENSNBRG00000006585	pan2	99	97.209	ENSCVAG00000010197	pan2	92	97.209	Cyprinodon_variegatus
ENSNBRG00000006585	pan2	99	92.558	ENSDARG00000074675	pan2	92	92.558	Danio_rerio
ENSNBRG00000006585	pan2	99	86.364	ENSDNOG00000010940	PAN2	92	86.364	Dasypus_novemcinctus
ENSNBRG00000006585	pan2	84	67.347	FBgn0033352	PAN2	78	67.347	Drosophila_melanogaster
ENSNBRG00000006585	pan2	66	89.055	ENSETEG00000012041	PAN2	68	89.055	Echinops_telfairi
ENSNBRG00000006585	pan2	95	80.693	ENSEBUG00000002773	pan2	87	80.693	Eptatretus_burgeri
ENSNBRG00000006585	pan2	97	89.500	ENSEASG00005005235	PAN2	90	89.500	Equus_asinus_asinus
ENSNBRG00000006585	pan2	99	87.273	ENSECAG00000019814	PAN2	92	87.273	Equus_caballus
ENSNBRG00000006585	pan2	99	94.393	ENSELUG00000024604	pan2	92	94.393	Esox_lucius
ENSNBRG00000006585	pan2	99	86.818	ENSFCAG00000012021	PAN2	92	86.818	Felis_catus
ENSNBRG00000006585	pan2	95	91.045	ENSFALG00000000464	PAN2	90	91.045	Ficedula_albicollis
ENSNBRG00000006585	pan2	97	88.557	ENSFDAG00000017104	PAN2	90	88.557	Fukomys_damarensis
ENSNBRG00000006585	pan2	88	98.049	ENSFHEG00000000157	pan2	88	98.049	Fundulus_heteroclitus
ENSNBRG00000006585	pan2	99	92.760	ENSGMOG00000007249	pan2	92	92.760	Gadus_morhua
ENSNBRG00000006585	pan2	97	91.045	ENSGALG00000031512	PAN2	90	87.727	Gallus_gallus
ENSNBRG00000006585	pan2	99	96.279	ENSGAFG00000000284	pan2	92	96.279	Gambusia_affinis
ENSNBRG00000006585	pan2	99	96.380	ENSGACG00000010722	pan2	92	96.380	Gasterosteus_aculeatus
ENSNBRG00000006585	pan2	96	87.273	ENSGAGG00000007868	PAN2	90	87.273	Gopherus_agassizii
ENSNBRG00000006585	pan2	99	86.818	ENSGGOG00000009115	PAN2	92	86.818	Gorilla_gorilla
ENSNBRG00000006585	pan2	99	100.000	ENSHBUG00000005234	pan2	92	100.000	Haplochromis_burtoni
ENSNBRG00000006585	pan2	97	88.557	ENSHGLG00000005647	PAN2	90	88.557	Heterocephalus_glaber_female
ENSNBRG00000006585	pan2	97	88.557	ENSHGLG00100014057	PAN2	90	88.557	Heterocephalus_glaber_male
ENSNBRG00000006585	pan2	99	92.694	ENSHCOG00000007920	pan2	92	92.694	Hippocampus_comes
ENSNBRG00000006585	pan2	99	91.781	ENSIPUG00000011065	PAN2	92	91.781	Ictalurus_punctatus
ENSNBRG00000006585	pan2	94	61.111	ENSSTOG00000015974	PAN2	100	61.111	Ictidomys_tridecemlineatus
ENSNBRG00000006585	pan2	98	87.619	ENSJJAG00000013044	Pan2	89	87.619	Jaculus_jaculus
ENSNBRG00000006585	pan2	99	95.349	ENSKMAG00000006192	pan2	92	95.349	Kryptolebias_marmoratus
ENSNBRG00000006585	pan2	91	93.603	ENSLBEG00000015763	pan2	84	93.603	Labrus_bergylta
ENSNBRG00000006585	pan2	96	89.091	ENSLACG00000018694	PAN2	91	89.091	Latimeria_chalumnae
ENSNBRG00000006585	pan2	99	92.694	ENSLOCG00000004333	pan2	92	92.694	Lepisosteus_oculatus
ENSNBRG00000006585	pan2	99	86.818	ENSLAFG00000014873	PAN2	92	86.818	Loxodonta_africana
ENSNBRG00000006585	pan2	99	86.818	ENSMFAG00000002293	PAN2	92	86.818	Macaca_fascicularis
ENSNBRG00000006585	pan2	99	86.818	ENSMMUG00000013482	PAN2	92	86.818	Macaca_mulatta
ENSNBRG00000006585	pan2	99	86.364	ENSMNEG00000033264	PAN2	92	86.364	Macaca_nemestrina
ENSNBRG00000006585	pan2	97	89.500	ENSMLEG00000037388	PAN2	90	89.500	Mandrillus_leucophaeus
ENSNBRG00000006585	pan2	99	97.209	ENSMAMG00000001624	pan2	92	97.209	Mastacembelus_armatus
ENSNBRG00000006585	pan2	98	62.690	ENSMZEG00005026472	pan2	99	63.367	Maylandia_zebra
ENSNBRG00000006585	pan2	99	100.000	ENSMZEG00005026462	pan2	92	100.000	Maylandia_zebra
ENSNBRG00000006585	pan2	92	94.767	ENSMGAG00000001439	PAN2	90	94.767	Meleagris_gallopavo
ENSNBRG00000006585	pan2	97	89.055	ENSMAUG00000012602	Pan2	91	89.055	Mesocricetus_auratus
ENSNBRG00000006585	pan2	99	86.818	ENSMICG00000017661	PAN2	92	86.818	Microcebus_murinus
ENSNBRG00000006585	pan2	97	89.055	ENSMOCG00000007191	Pan2	91	89.055	Microtus_ochrogaster
ENSNBRG00000006585	pan2	98	96.154	ENSMMOG00000009313	pan2	90	96.154	Mola_mola
ENSNBRG00000006585	pan2	99	96.804	ENSMALG00000013377	pan2	92	96.804	Monopterus_albus
ENSNBRG00000006585	pan2	99	86.364	MGP_CAROLIEiJ_G0015930	Pan2	92	86.364	Mus_caroli
ENSNBRG00000006585	pan2	99	86.364	ENSMUSG00000005682	Pan2	92	86.364	Mus_musculus
ENSNBRG00000006585	pan2	99	86.364	MGP_PahariEiJ_G0031154	Pan2	92	86.364	Mus_pahari
ENSNBRG00000006585	pan2	99	86.364	MGP_SPRETEiJ_G0016755	Pan2	92	86.364	Mus_spretus
ENSNBRG00000006585	pan2	99	86.818	ENSMPUG00000001383	PAN2	92	86.818	Mustela_putorius_furo
ENSNBRG00000006585	pan2	99	86.364	ENSMLUG00000006737	PAN2	92	86.364	Myotis_lucifugus
ENSNBRG00000006585	pan2	97	89.055	ENSNGAG00000007930	Pan2	92	86.364	Nannospalax_galili
ENSNBRG00000006585	pan2	99	86.818	ENSNLEG00000017499	PAN2	92	86.818	Nomascus_leucogenys
ENSNBRG00000006585	pan2	96	86.818	ENSMEUG00000010125	PAN2	90	86.818	Notamacropus_eugenii
ENSNBRG00000006585	pan2	99	85.520	ENSOPRG00000001468	PAN2	92	85.520	Ochotona_princeps
ENSNBRG00000006585	pan2	99	85.909	ENSODEG00000007203	PAN2	92	85.909	Octodon_degus
ENSNBRG00000006585	pan2	99	100.000	ENSONIG00000016732	pan2	92	100.000	Oreochromis_niloticus
ENSNBRG00000006585	pan2	75	84.158	ENSOANG00000005151	PAN2	87	84.158	Ornithorhynchus_anatinus
ENSNBRG00000006585	pan2	99	86.818	ENSOCUG00000007227	PAN2	92	86.818	Oryctolagus_cuniculus
ENSNBRG00000006585	pan2	99	96.279	ENSORLG00000015195	pan2	92	96.279	Oryzias_latipes
ENSNBRG00000006585	pan2	99	96.279	ENSORLG00020000277	pan2	92	96.279	Oryzias_latipes_hni
ENSNBRG00000006585	pan2	99	95.349	ENSORLG00015005193	pan2	92	95.349	Oryzias_latipes_hsok
ENSNBRG00000006585	pan2	99	96.279	ENSOMEG00000022087	pan2	92	96.279	Oryzias_melastigma
ENSNBRG00000006585	pan2	99	86.818	ENSOGAG00000030620	PAN2	92	86.818	Otolemur_garnettii
ENSNBRG00000006585	pan2	99	87.273	ENSOARG00000009379	PAN2	92	87.273	Ovis_aries
ENSNBRG00000006585	pan2	99	86.818	ENSPPAG00000001208	PAN2	92	86.818	Pan_paniscus
ENSNBRG00000006585	pan2	99	86.818	ENSPPRG00000021586	PAN2	92	86.818	Panthera_pardus
ENSNBRG00000006585	pan2	99	86.818	ENSPTIG00000012494	PAN2	92	86.818	Panthera_tigris_altaica
ENSNBRG00000006585	pan2	99	86.818	ENSPTRG00000052054	PAN2	92	86.818	Pan_troglodytes
ENSNBRG00000006585	pan2	90	86.818	ENSPANG00000018906	PAN2	91	86.818	Papio_anubis
ENSNBRG00000006585	pan2	99	91.781	ENSPKIG00000003973	pan2	92	91.781	Paramormyrops_kingsleyae
ENSNBRG00000006585	pan2	96	87.558	ENSPSIG00000003267	PAN2	90	87.727	Pelodiscus_sinensis
ENSNBRG00000006585	pan2	99	94.419	ENSPMGG00000023186	pan2	92	94.419	Periophthalmus_magnuspinnatus
ENSNBRG00000006585	pan2	99	85.909	ENSPEMG00000018505	Pan2	92	85.909	Peromyscus_maniculatus_bairdii
ENSNBRG00000006585	pan2	86	84.343	ENSPMAG00000004731	pan2	89	84.343	Petromyzon_marinus
ENSNBRG00000006585	pan2	96	86.364	ENSPCIG00000024643	PAN2	90	86.364	Phascolarctos_cinereus
ENSNBRG00000006585	pan2	99	97.209	ENSPFOG00000008392	pan2	92	97.209	Poecilia_formosa
ENSNBRG00000006585	pan2	99	96.744	ENSPLAG00000009198	pan2	92	96.744	Poecilia_latipinna
ENSNBRG00000006585	pan2	99	97.209	ENSPMEG00000001484	pan2	92	97.209	Poecilia_mexicana
ENSNBRG00000006585	pan2	99	96.744	ENSPREG00000000900	pan2	92	96.744	Poecilia_reticulata
ENSNBRG00000006585	pan2	88	86.818	ENSPPYG00000004656	PAN2	91	86.818	Pongo_abelii
ENSNBRG00000006585	pan2	90	87.558	ENSPCAG00000011047	PAN2	91	87.558	Procavia_capensis
ENSNBRG00000006585	pan2	99	86.364	ENSPCOG00000018263	PAN2	92	86.364	Propithecus_coquereli
ENSNBRG00000006585	pan2	93	85.185	ENSPVAG00000007591	PAN2	87	85.909	Pteropus_vampyrus
ENSNBRG00000006585	pan2	98	99.524	ENSPNYG00000002629	pan2	92	99.524	Pundamilia_nyererei
ENSNBRG00000006585	pan2	99	92.237	ENSPNAG00000027140	pan2	92	92.237	Pygocentrus_nattereri
ENSNBRG00000006585	pan2	99	86.818	ENSRNOG00000032441	Pan2	92	86.818	Rattus_norvegicus
ENSNBRG00000006585	pan2	99	86.364	ENSRBIG00000029591	PAN2	92	86.364	Rhinopithecus_bieti
ENSNBRG00000006585	pan2	99	85.909	ENSRROG00000041950	PAN2	92	85.909	Rhinopithecus_roxellana
ENSNBRG00000006585	pan2	71	47.087	YGL094C	-	84	47.087	Saccharomyces_cerevisiae
ENSNBRG00000006585	pan2	97	89.500	ENSSBOG00000027343	PAN2	90	89.500	Saimiri_boliviensis_boliviensis
ENSNBRG00000006585	pan2	87	86.818	ENSSHAG00000000122	PAN2	90	86.818	Sarcophilus_harrisii
ENSNBRG00000006585	pan2	99	90.411	ENSSFOG00015017740	pan2	92	90.411	Scleropages_formosus
ENSNBRG00000006585	pan2	99	96.364	ENSSMAG00000020901	pan2	92	96.364	Scophthalmus_maximus
ENSNBRG00000006585	pan2	99	96.804	ENSSDUG00000001840	pan2	92	96.804	Seriola_dumerili
ENSNBRG00000006585	pan2	99	96.804	ENSSLDG00000013866	pan2	92	96.804	Seriola_lalandi_dorsalis
ENSNBRG00000006585	pan2	88	86.364	ENSSARG00000013350	PAN2	83	86.364	Sorex_araneus
ENSNBRG00000006585	pan2	88	88.636	ENSSPUG00000004270	PAN2	89	88.636	Sphenodon_punctatus
ENSNBRG00000006585	pan2	99	97.260	ENSSPAG00000019970	pan2	92	97.260	Stegastes_partitus
ENSNBRG00000006585	pan2	99	86.818	ENSSSCG00000000393	PAN2	91	92.361	Sus_scrofa
ENSNBRG00000006585	pan2	99	96.347	ENSTRUG00000014260	pan2	92	96.347	Takifugu_rubripes
ENSNBRG00000006585	pan2	99	96.804	ENSTNIG00000012537	pan2	92	96.804	Tetraodon_nigroviridis
ENSNBRG00000006585	pan2	77	85.909	ENSTTRG00000007150	PAN2	72	85.909	Tursiops_truncatus
ENSNBRG00000006585	pan2	98	88.235	ENSUAMG00000026522	PAN2	92	88.235	Ursus_americanus
ENSNBRG00000006585	pan2	99	86.818	ENSUMAG00000017020	PAN2	92	86.818	Ursus_maritimus
ENSNBRG00000006585	pan2	79	92.105	ENSVPAG00000007309	PAN2	79	92.105	Vicugna_pacos
ENSNBRG00000006585	pan2	99	86.818	ENSVVUG00000021878	PAN2	92	86.818	Vulpes_vulpes
ENSNBRG00000006585	pan2	97	91.192	ENSXETG00000009434	pan2	92	91.192	Xenopus_tropicalis
ENSNBRG00000006585	pan2	99	82.036	ENSXCOG00000014391	pan2	100	81.950	Xiphophorus_couchianus
ENSNBRG00000006585	pan2	99	97.209	ENSXMAG00000011661	pan2	92	97.209	Xiphophorus_maculatus