EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006783 (Gene tree)
Gene ID: 102776773
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA:m(4)X modification enzyme TRM13 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5975 bases
Position: chrJH422290.1:3555372-3561346
Accession: 102776773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008730	TRM13	PF05206.14	8.7e-68	1	1
ENSNBRP00000008713	TRM13	PF05206.14	6.7e-65	1	1
ENSNBRP00000008713	zf-U11-48K	PF05253.12	6.4e-10	1	1
ENSNBRP00000008730	zf-U11-48K	PF05253.12	6.4e-10	1	1
ENSNBRP00000008713	zf-TRM13_CCCH	PF11722.8	5.5e-11	1	1
ENSNBRP00000008730	zf-TRM13_CCCH	PF11722.8	5.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000008985	-	1320	-	ENSNBRP00000008730	439 (aa)	-	-
ENSNBRT00000008966	-	1305	XM_006790277	ENSNBRP00000008713	434 (aa)	XP_006790340	-

Gene Model

Click here to download ENSNBRG00000006783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006783	trmt13	95	50.000	ENSG00000122435	TRMT13	96	48.729	Homo_sapiens
ENSNBRG00000006783	trmt13	97	68.930	ENSAPOG00000015131	trmt13	99	69.547	Acanthochromis_polyacanthus
ENSNBRG00000006783	trmt13	95	49.783	ENSAMEG00000008917	TRMT13	99	47.619	Ailuropoda_melanoleuca
ENSNBRG00000006783	trmt13	98	77.391	ENSACIG00000005804	trmt13	97	74.229	Amphilophus_citrinellus
ENSNBRG00000006783	trmt13	97	68.724	ENSAOCG00000023585	trmt13	99	68.724	Amphiprion_ocellaris
ENSNBRG00000006783	trmt13	97	69.342	ENSAPEG00000004025	trmt13	99	69.342	Amphiprion_percula
ENSNBRG00000006783	trmt13	98	68.522	ENSATEG00000006597	trmt13	98	68.534	Anabas_testudineus
ENSNBRG00000006783	trmt13	87	52.019	ENSAPLG00000014924	TRMT13	98	52.019	Anas_platyrhynchos
ENSNBRG00000006783	trmt13	96	51.304	ENSACAG00000003498	TRMT13	97	51.304	Anolis_carolinensis
ENSNBRG00000006783	trmt13	95	50.216	ENSANAG00000019525	TRMT13	96	48.941	Aotus_nancymaae
ENSNBRG00000006783	trmt13	98	91.518	ENSACLG00000020018	trmt13	100	91.518	Astatotilapia_calliptera
ENSNBRG00000006783	trmt13	97	51.168	ENSAMXG00000017963	trmt13	98	52.229	Astyanax_mexicanus
ENSNBRG00000006783	trmt13	95	50.000	ENSBTAG00000015781	TRMT13	99	48.247	Bos_taurus
ENSNBRG00000006783	trmt13	95	49.784	ENSCJAG00000000200	TRMT13	99	47.423	Callithrix_jacchus
ENSNBRG00000006783	trmt13	64	46.584	ENSCAFG00000020021	TRMT13	99	46.894	Canis_familiaris
ENSNBRG00000006783	trmt13	54	57.741	ENSCAFG00020011572	TRMT13	90	50.943	Canis_lupus_dingo
ENSNBRG00000006783	trmt13	95	50.216	ENSCHIG00000015395	TRMT13	99	48.454	Capra_hircus
ENSNBRG00000006783	trmt13	95	50.433	ENSTSYG00000010811	TRMT13	94	57.895	Carlito_syrichta
ENSNBRG00000006783	trmt13	73	38.109	ENSCAPG00000009085	TRMT13	96	41.261	Cavia_aperea
ENSNBRG00000006783	trmt13	97	50.108	ENSCPOG00000000694	TRMT13	97	48.305	Cavia_porcellus
ENSNBRG00000006783	trmt13	95	49.567	ENSCCAG00000023772	TRMT13	96	48.305	Cebus_capucinus
ENSNBRG00000006783	trmt13	97	49.476	ENSCATG00000033556	TRMT13	97	54.717	Cercocebus_atys
ENSNBRG00000006783	trmt13	88	49.767	ENSCLAG00000008220	TRMT13	99	50.231	Chinchilla_lanigera
ENSNBRG00000006783	trmt13	97	49.476	ENSCSAG00000001506	TRMT13	98	49.476	Chlorocebus_sabaeus
ENSNBRG00000006783	trmt13	97	50.641	ENSCPBG00000026671	TRMT13	95	50.641	Chrysemys_picta_bellii
ENSNBRG00000006783	trmt13	97	49.266	ENSCANG00000034659	TRMT13	97	53.774	Colobus_angolensis_palliatus
ENSNBRG00000006783	trmt13	95	50.325	ENSCGRG00001021601	Trmt13	94	50.325	Cricetulus_griseus_chok1gshd
ENSNBRG00000006783	trmt13	99	65.393	ENSCSEG00000000591	trmt13	99	65.393	Cynoglossus_semilaevis
ENSNBRG00000006783	trmt13	98	64.454	ENSCVAG00000017342	trmt13	95	64.454	Cyprinodon_variegatus
ENSNBRG00000006783	trmt13	98	53.796	ENSDARG00000102846	trmt13	98	53.796	Danio_rerio
ENSNBRG00000006783	trmt13	54	57.377	ENSDNOG00000001710	TRMT13	85	48.951	Dasypus_novemcinctus
ENSNBRG00000006783	trmt13	97	49.359	ENSDORG00000015808	Trmt13	95	49.359	Dipodomys_ordii
ENSNBRG00000006783	trmt13	99	31.760	FBgn0037435	CG18048	97	31.760	Drosophila_melanogaster
ENSNBRG00000006783	trmt13	95	43.803	ENSETEG00000005819	TRMT13	96	45.073	Echinops_telfairi
ENSNBRG00000006783	trmt13	95	43.379	ENSEBUG00000014444	trmt13	96	43.379	Eptatretus_burgeri
ENSNBRG00000006783	trmt13	97	50.427	ENSEASG00005015918	TRMT13	99	47.629	Equus_asinus_asinus
ENSNBRG00000006783	trmt13	97	50.214	ENSECAG00000022626	TRMT13	99	47.423	Equus_caballus
ENSNBRG00000006783	trmt13	73	59.259	ENSEEUG00000000294	TRMT13	73	58.333	Erinaceus_europaeus
ENSNBRG00000006783	trmt13	97	52.442	ENSELUG00000003803	trmt13	98	52.854	Esox_lucius
ENSNBRG00000006783	trmt13	95	49.134	ENSFCAG00000030618	TRMT13	98	50.704	Felis_catus
ENSNBRG00000006783	trmt13	96	52.174	ENSFALG00000002424	TRMT13	95	52.174	Ficedula_albicollis
ENSNBRG00000006783	trmt13	97	49.786	ENSFDAG00000006342	TRMT13	98	47.423	Fukomys_damarensis
ENSNBRG00000006783	trmt13	80	66.142	ENSFHEG00000022954	trmt13	100	66.259	Fundulus_heteroclitus
ENSNBRG00000006783	trmt13	95	53.953	ENSGMOG00000013223	trmt13	99	54.147	Gadus_morhua
ENSNBRG00000006783	trmt13	96	51.641	ENSGALG00000005290	TRMT13	99	49.469	Gallus_gallus
ENSNBRG00000006783	trmt13	82	62.042	ENSGAFG00000001577	trmt13	84	62.042	Gambusia_affinis
ENSNBRG00000006783	trmt13	98	69.451	ENSGACG00000013428	trmt13	98	69.890	Gasterosteus_aculeatus
ENSNBRG00000006783	trmt13	97	50.320	ENSGAGG00000023303	TRMT13	96	51.111	Gopherus_agassizii
ENSNBRG00000006783	trmt13	95	49.784	ENSGGOG00000005616	TRMT13	96	48.517	Gorilla_gorilla
ENSNBRG00000006783	trmt13	98	92.411	ENSHBUG00000007754	trmt13	100	92.411	Haplochromis_burtoni
ENSNBRG00000006783	trmt13	97	49.356	ENSHGLG00000002164	TRMT13	98	46.791	Heterocephalus_glaber_female
ENSNBRG00000006783	trmt13	97	49.356	ENSHGLG00100001618	TRMT13	98	46.791	Heterocephalus_glaber_male
ENSNBRG00000006783	trmt13	96	53.103	ENSHCOG00000020553	trmt13	99	52.144	Hippocampus_comes
ENSNBRG00000006783	trmt13	97	51.965	ENSIPUG00000024787	trmt13	99	52.597	Ictalurus_punctatus
ENSNBRG00000006783	trmt13	97	49.145	ENSSTOG00000013483	TRMT13	95	49.145	Ictidomys_tridecemlineatus
ENSNBRG00000006783	trmt13	97	49.359	ENSJJAG00000018012	Trmt13	98	47.379	Jaculus_jaculus
ENSNBRG00000006783	trmt13	63	64.214	ENSKMAG00000007639	trmt13	93	64.548	Kryptolebias_marmoratus
ENSNBRG00000006783	trmt13	98	67.888	ENSLBEG00000020238	trmt13	99	67.888	Labrus_bergylta
ENSNBRG00000006783	trmt13	97	51.820	ENSLACG00000013153	TRMT13	98	51.820	Latimeria_chalumnae
ENSNBRG00000006783	trmt13	98	51.828	ENSLOCG00000000418	trmt13	98	51.828	Lepisosteus_oculatus
ENSNBRG00000006783	trmt13	75	49.865	ENSLAFG00000002383	TRMT13	98	49.865	Loxodonta_africana
ENSNBRG00000006783	trmt13	97	49.057	ENSMFAG00000034681	TRMT13	97	53.774	Macaca_fascicularis
ENSNBRG00000006783	trmt13	97	49.057	ENSMMUG00000004243	TRMT13	97	53.774	Macaca_mulatta
ENSNBRG00000006783	trmt13	97	49.057	ENSMNEG00000036102	TRMT13	97	53.774	Macaca_nemestrina
ENSNBRG00000006783	trmt13	97	49.266	ENSMLEG00000034258	TRMT13	97	53.774	Mandrillus_leucophaeus
ENSNBRG00000006783	trmt13	96	71.397	ENSMAMG00000016597	trmt13	96	71.397	Mastacembelus_armatus
ENSNBRG00000006783	trmt13	98	91.295	ENSMZEG00005020959	trmt13	100	91.295	Maylandia_zebra
ENSNBRG00000006783	trmt13	87	51.905	ENSMGAG00000006970	TRMT13	98	51.905	Meleagris_gallopavo
ENSNBRG00000006783	trmt13	98	49.372	ENSMAUG00000010448	Trmt13	97	49.372	Mesocricetus_auratus
ENSNBRG00000006783	trmt13	95	50.216	ENSMICG00000005283	TRMT13	96	48.729	Microcebus_murinus
ENSNBRG00000006783	trmt13	97	51.173	ENSMOCG00000019914	Trmt13	99	48.971	Microtus_ochrogaster
ENSNBRG00000006783	trmt13	55	62.917	ENSMMOG00000007762	trmt13	90	59.919	Mola_mola
ENSNBRG00000006783	trmt13	99	48.347	ENSMODG00000003646	TRMT13	99	48.347	Monodelphis_domestica
ENSNBRG00000006783	trmt13	97	68.397	ENSMALG00000020965	trmt13	97	68.397	Monopterus_albus
ENSNBRG00000006783	trmt13	97	49.372	MGP_CAROLIEiJ_G0025568	Trmt13	100	55.556	Mus_caroli
ENSNBRG00000006783	trmt13	98	49.372	ENSMUSG00000033439	Trmt13	98	55.435	Mus_musculus
ENSNBRG00000006783	trmt13	98	49.372	MGP_PahariEiJ_G0027014	Trmt13	93	56.395	Mus_pahari
ENSNBRG00000006783	trmt13	97	49.683	MGP_SPRETEiJ_G0026518	Trmt13	98	55.435	Mus_spretus
ENSNBRG00000006783	trmt13	76	50.000	ENSMPUG00000002078	-	96	50.000	Mustela_putorius_furo
ENSNBRG00000006783	trmt13	95	50.647	ENSMLUG00000002124	TRMT13	98	48.233	Myotis_lucifugus
ENSNBRG00000006783	trmt13	95	49.784	ENSNLEG00000035917	TRMT13	96	48.305	Nomascus_leucogenys
ENSNBRG00000006783	trmt13	53	49.787	ENSMEUG00000013346	-	92	49.787	Notamacropus_eugenii
ENSNBRG00000006783	trmt13	54	56.904	ENSOPRG00000012048	TRMT13	57	48.921	Ochotona_princeps
ENSNBRG00000006783	trmt13	98	90.402	ENSONIG00000004574	trmt13	100	90.402	Oreochromis_niloticus
ENSNBRG00000006783	trmt13	88	50.230	ENSOANG00000012057	TRMT13	97	50.230	Ornithorhynchus_anatinus
ENSNBRG00000006783	trmt13	95	49.565	ENSOCUG00000023095	TRMT13	95	49.565	Oryctolagus_cuniculus
ENSNBRG00000006783	trmt13	96	60.976	ENSORLG00000003320	trmt13	99	60.394	Oryzias_latipes
ENSNBRG00000006783	trmt13	95	63.265	ENSORLG00020005972	trmt13	96	63.265	Oryzias_latipes_hni
ENSNBRG00000006783	trmt13	97	66.225	ENSORLG00015002270	trmt13	98	66.225	Oryzias_latipes_hsok
ENSNBRG00000006783	trmt13	97	66.447	ENSOMEG00000006724	trmt13	94	66.886	Oryzias_melastigma
ENSNBRG00000006783	trmt13	95	50.216	ENSOGAG00000005618	TRMT13	96	48.041	Otolemur_garnettii
ENSNBRG00000006783	trmt13	95	50.216	ENSOARG00000017983	TRMT13	99	48.454	Ovis_aries
ENSNBRG00000006783	trmt13	95	50.216	ENSPPAG00000043736	TRMT13	96	48.941	Pan_paniscus
ENSNBRG00000006783	trmt13	95	49.134	ENSPPRG00000003424	TRMT13	98	50.704	Panthera_pardus
ENSNBRG00000006783	trmt13	95	49.134	ENSPTIG00000018598	TRMT13	98	50.704	Panthera_tigris_altaica
ENSNBRG00000006783	trmt13	95	50.000	ENSPTRG00000001001	TRMT13	94	50.000	Pan_troglodytes
ENSNBRG00000006783	trmt13	97	49.266	ENSPANG00000007598	TRMT13	97	53.774	Papio_anubis
ENSNBRG00000006783	trmt13	98	52.723	ENSPKIG00000001514	trmt13	99	52.723	Paramormyrops_kingsleyae
ENSNBRG00000006783	trmt13	87	49.765	ENSPSIG00000012703	TRMT13	99	49.765	Pelodiscus_sinensis
ENSNBRG00000006783	trmt13	98	58.575	ENSPMGG00000013298	trmt13	95	57.778	Periophthalmus_magnuspinnatus
ENSNBRG00000006783	trmt13	95	50.325	ENSPEMG00000000275	Trmt13	98	48.745	Peromyscus_maniculatus_bairdii
ENSNBRG00000006783	trmt13	97	44.561	ENSPMAG00000000823	trmt13	99	44.421	Petromyzon_marinus
ENSNBRG00000006783	trmt13	95	50.649	ENSPCIG00000007699	TRMT13	95	50.649	Phascolarctos_cinereus
ENSNBRG00000006783	trmt13	95	63.288	ENSPFOG00000008675	trmt13	94	63.288	Poecilia_formosa
ENSNBRG00000006783	trmt13	97	62.144	ENSPLAG00000009709	trmt13	99	62.144	Poecilia_latipinna
ENSNBRG00000006783	trmt13	97	62.061	ENSPMEG00000022954	trmt13	99	62.061	Poecilia_mexicana
ENSNBRG00000006783	trmt13	85	62.121	ENSPREG00000005645	trmt13	95	58.333	Poecilia_reticulata
ENSNBRG00000006783	trmt13	96	49.571	ENSPPYG00000001120	TRMT13	95	49.571	Pongo_abelii
ENSNBRG00000006783	trmt13	95	49.675	ENSPCAG00000002340	TRMT13	96	48.941	Procavia_capensis
ENSNBRG00000006783	trmt13	95	49.784	ENSPCOG00000017984	TRMT13	99	47.010	Propithecus_coquereli
ENSNBRG00000006783	trmt13	95	50.216	ENSPVAG00000017430	TRMT13	99	47.423	Pteropus_vampyrus
ENSNBRG00000006783	trmt13	98	97.892	ENSPNYG00000013690	trmt13	100	97.892	Pundamilia_nyererei
ENSNBRG00000006783	trmt13	97	50.866	ENSPNAG00000022130	trmt13	98	50.866	Pygocentrus_nattereri
ENSNBRG00000006783	trmt13	98	49.257	ENSRNOG00000015140	Trmt13	94	49.257	Rattus_norvegicus
ENSNBRG00000006783	trmt13	97	49.266	ENSRBIG00000037686	TRMT13	97	53.774	Rhinopithecus_bieti
ENSNBRG00000006783	trmt13	97	49.266	ENSRROG00000044057	TRMT13	97	53.774	Rhinopithecus_roxellana
ENSNBRG00000006783	trmt13	95	50.216	ENSSBOG00000026541	TRMT13	96	48.941	Saimiri_boliviensis_boliviensis
ENSNBRG00000006783	trmt13	91	49.324	ENSSHAG00000005213	TRMT13	97	49.324	Sarcophilus_harrisii
ENSNBRG00000006783	trmt13	99	52.008	ENSSFOG00015017560	trmt13	99	52.431	Scleropages_formosus
ENSNBRG00000006783	trmt13	99	65.957	ENSSMAG00000014592	trmt13	98	65.957	Scophthalmus_maximus
ENSNBRG00000006783	trmt13	98	69.593	ENSSDUG00000015508	trmt13	97	69.133	Seriola_dumerili
ENSNBRG00000006783	trmt13	99	69.345	ENSSLDG00000019060	trmt13	98	69.345	Seriola_lalandi_dorsalis
ENSNBRG00000006783	trmt13	98	44.374	ENSSARG00000010344	TRMT13	99	44.492	Sorex_araneus
ENSNBRG00000006783	trmt13	95	48.268	ENSSPUG00000016339	TRMT13	99	47.732	Sphenodon_punctatus
ENSNBRG00000006783	trmt13	97	73.128	ENSSPAG00000011922	trmt13	99	72.609	Stegastes_partitus
ENSNBRG00000006783	trmt13	95	50.649	ENSSSCG00000006869	TRMT13	99	50.000	Sus_scrofa
ENSNBRG00000006783	trmt13	97	52.061	ENSTGUG00000005253	TRMT13	98	52.061	Taeniopygia_guttata
ENSNBRG00000006783	trmt13	96	63.537	ENSTRUG00000008400	trmt13	97	63.537	Takifugu_rubripes
ENSNBRG00000006783	trmt13	84	42.469	ENSTBEG00000008911	TRMT13	98	42.469	Tupaia_belangeri
ENSNBRG00000006783	trmt13	95	49.119	ENSUAMG00000017251	TRMT13	98	47.391	Ursus_americanus
ENSNBRG00000006783	trmt13	95	50.000	ENSUMAG00000007901	TRMT13	98	49.884	Ursus_maritimus
ENSNBRG00000006783	trmt13	71	75.000	ENSVPAG00000001034	TRMT13	80	75.000	Vicugna_pacos
ENSNBRG00000006783	trmt13	97	49.894	ENSVVUG00000021996	TRMT13	96	49.894	Vulpes_vulpes
ENSNBRG00000006783	trmt13	96	48.124	ENSXETG00000013204	trmt13	97	47.702	Xenopus_tropicalis
ENSNBRG00000006783	trmt13	96	62.168	ENSXMAG00000010765	trmt13	98	62.168	Xiphophorus_maculatus