EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000006805 (Gene tree)
Gene ID: -
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease PARN-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9889 bases
Position: chrJH422393.1:782402-792290
Accession: 102788671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008750	RNA_bind	PF08675.11	8.5e-34	1	1
ENSNBRP00000008750	CAF1	PF04857.20	8.8e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000009005	-	1746	XM_006804331	ENSNBRP00000008750	581 (aa)	XP_006804394	-

Gene Model

Click here to download ENSNBRG00000006805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006805	parn	90	77.154	ENSG00000140694	PARN	91	77.966	Homo_sapiens
ENSNBRG00000006805	parn	90	76.262	ENSAMEG00000011208	PARN	83	76.262	Ailuropoda_melanoleuca
ENSNBRG00000006805	parn	97	87.456	ENSACIG00000000619	parn	89	87.456	Amphilophus_citrinellus
ENSNBRG00000006805	parn	93	91.818	ENSAOCG00000003465	parn	80	91.818	Amphiprion_ocellaris
ENSNBRG00000006805	parn	90	86.742	ENSAPEG00000010661	parn	100	86.742	Amphiprion_percula
ENSNBRG00000006805	parn	93	91.486	ENSATEG00000004661	parn	81	91.486	Anabas_testudineus
ENSNBRG00000006805	parn	94	73.741	ENSAPLG00000013914	PARN	87	73.882	Anas_platyrhynchos
ENSNBRG00000006805	parn	90	77.196	ENSACAG00000004973	PARN	82	76.822	Anolis_carolinensis
ENSNBRG00000006805	parn	90	76.723	ENSANAG00000031516	PARN	91	77.966	Aotus_nancymaae
ENSNBRG00000006805	parn	93	95.455	ENSACLG00000004742	parn	81	95.455	Astatotilapia_calliptera
ENSNBRG00000006805	parn	92	80.443	ENSAMXG00000012390	parn	87	80.492	Astyanax_mexicanus
ENSNBRG00000006805	parn	98	69.320	ENSBTAG00000018097	PARN	89	71.622	Bos_taurus
ENSNBRG00000006805	parn	90	77.154	ENSCJAG00000015866	PARN	91	77.966	Callithrix_jacchus
ENSNBRG00000006805	parn	90	76.030	ENSCAFG00000018795	PARN	90	71.503	Canis_familiaris
ENSNBRG00000006805	parn	90	76.404	ENSCAFG00020024126	PARN	83	76.404	Canis_lupus_dingo
ENSNBRG00000006805	parn	98	72.165	ENSCHIG00000018143	PARN	90	72.165	Capra_hircus
ENSNBRG00000006805	parn	79	50.737	ENSCAPG00000007984	PARN	78	50.737	Cavia_aperea
ENSNBRG00000006805	parn	90	75.514	ENSCPOG00000002263	PARN	83	75.514	Cavia_porcellus
ENSNBRG00000006805	parn	90	77.154	ENSCCAG00000030367	PARN	91	77.966	Cebus_capucinus
ENSNBRG00000006805	parn	90	76.779	ENSCATG00000041368	PARN	100	77.966	Cercocebus_atys
ENSNBRG00000006805	parn	90	76.030	ENSCLAG00000015406	PARN	83	76.030	Chinchilla_lanigera
ENSNBRG00000006805	parn	90	77.154	ENSCSAG00000008142	PARN	83	77.154	Chlorocebus_sabaeus
ENSNBRG00000006805	parn	89	58.444	ENSCHOG00000007014	PARN	82	58.444	Choloepus_hoffmanni
ENSNBRG00000006805	parn	84	73.705	ENSCPBG00000006609	PARN	86	73.705	Chrysemys_picta_bellii
ENSNBRG00000006805	parn	87	41.839	ENSCING00000010142	-	99	41.839	Ciona_intestinalis
ENSNBRG00000006805	parn	90	65.082	ENSCANG00000028849	-	76	77.966	Colobus_angolensis_palliatus
ENSNBRG00000006805	parn	93	73.514	ENSCGRG00001012096	Parn	87	73.514	Cricetulus_griseus_chok1gshd
ENSNBRG00000006805	parn	93	73.514	ENSCGRG00000004939	Parn	87	73.514	Cricetulus_griseus_crigri
ENSNBRG00000006805	parn	93	85.353	ENSCSEG00000002064	parn	92	77.561	Cynoglossus_semilaevis
ENSNBRG00000006805	parn	93	87.862	ENSCVAG00000014848	parn	81	87.500	Cyprinodon_variegatus
ENSNBRG00000006805	parn	93	74.000	ENSDARG00000102634	parn	100	61.321	Danio_rerio
ENSNBRG00000006805	parn	90	76.536	ENSDNOG00000000833	PARN	94	76.536	Dasypus_novemcinctus
ENSNBRG00000006805	parn	71	69.288	ENSETEG00000014828	-	69	69.288	Echinops_telfairi
ENSNBRG00000006805	parn	90	75.655	ENSEASG00005011400	PARN	83	75.655	Equus_asinus_asinus
ENSNBRG00000006805	parn	90	75.468	ENSECAG00000017792	PARN	83	75.468	Equus_caballus
ENSNBRG00000006805	parn	80	61.735	ENSEEUG00000010370	PARN	73	61.735	Erinaceus_europaeus
ENSNBRG00000006805	parn	94	81.227	ENSELUG00000013139	parn	73	81.227	Esox_lucius
ENSNBRG00000006805	parn	98	72.193	ENSFCAG00000044961	PARN	87	76.271	Felis_catus
ENSNBRG00000006805	parn	93	73.874	ENSFALG00000003911	PARN	86	74.054	Ficedula_albicollis
ENSNBRG00000006805	parn	93	74.364	ENSFDAG00000009234	PARN	85	75.940	Fukomys_damarensis
ENSNBRG00000006805	parn	93	80.214	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSNBRG00000006805	parn	93	82.878	ENSGMOG00000003231	parn	99	82.514	Gadus_morhua
ENSNBRG00000006805	parn	99	71.235	ENSGALG00000003091	PARN	93	71.380	Gallus_gallus
ENSNBRG00000006805	parn	93	87.568	ENSGAFG00000011061	parn	81	87.568	Gambusia_affinis
ENSNBRG00000006805	parn	100	78.365	ENSGACG00000019501	parn	100	78.045	Gasterosteus_aculeatus
ENSNBRG00000006805	parn	90	77.154	ENSGGOG00000025224	PARN	91	77.966	Gorilla_gorilla
ENSNBRG00000006805	parn	100	94.295	ENSHBUG00000017906	parn	100	94.295	Haplochromis_burtoni
ENSNBRG00000006805	parn	98	71.256	ENSHGLG00000010886	PARN	91	71.256	Heterocephalus_glaber_female
ENSNBRG00000006805	parn	98	71.256	ENSHGLG00100014659	PARN	91	71.256	Heterocephalus_glaber_male
ENSNBRG00000006805	parn	99	77.778	ENSHCOG00000008683	parn	99	77.778	Hippocampus_comes
ENSNBRG00000006805	parn	91	72.830	ENSIPUG00000012401	parn	80	73.070	Ictalurus_punctatus
ENSNBRG00000006805	parn	98	70.934	ENSSTOG00000007519	PARN	91	70.934	Ictidomys_tridecemlineatus
ENSNBRG00000006805	parn	100	67.778	ENSJJAG00000023049	Parn	100	67.460	Jaculus_jaculus
ENSNBRG00000006805	parn	93	88.364	ENSKMAG00000009462	parn	81	88.364	Kryptolebias_marmoratus
ENSNBRG00000006805	parn	93	89.312	ENSLBEG00000009167	parn	86	88.949	Labrus_bergylta
ENSNBRG00000006805	parn	85	74.206	ENSLACG00000004207	PARN	100	73.113	Latimeria_chalumnae
ENSNBRG00000006805	parn	93	80.254	ENSLOCG00000000715	parn	80	80.254	Lepisosteus_oculatus
ENSNBRG00000006805	parn	90	76.536	ENSLAFG00000015036	PARN	84	76.536	Loxodonta_africana
ENSNBRG00000006805	parn	90	75.614	ENSMFAG00000044852	PARN	77	83.389	Macaca_fascicularis
ENSNBRG00000006805	parn	90	77.154	ENSMMUG00000018849	PARN	77	83.389	Macaca_mulatta
ENSNBRG00000006805	parn	90	77.154	ENSMNEG00000045108	PARN	77	83.389	Macaca_nemestrina
ENSNBRG00000006805	parn	90	76.966	ENSMLEG00000031743	PARN	77	83.056	Mandrillus_leucophaeus
ENSNBRG00000006805	parn	93	90.778	ENSMAMG00000006939	parn	80	90.778	Mastacembelus_armatus
ENSNBRG00000006805	parn	100	92.761	ENSMZEG00005013590	parn	100	92.761	Maylandia_zebra
ENSNBRG00000006805	parn	93	71.993	ENSMGAG00000001004	PARN	87	71.993	Meleagris_gallopavo
ENSNBRG00000006805	parn	100	61.957	ENSMAUG00000008025	Parn	100	61.957	Mesocricetus_auratus
ENSNBRG00000006805	parn	93	74.909	ENSMICG00000016053	PARN	91	76.271	Microcebus_murinus
ENSNBRG00000006805	parn	84	76.162	ENSMOCG00000022211	Parn	100	76.162	Microtus_ochrogaster
ENSNBRG00000006805	parn	100	83.416	ENSMMOG00000011333	parn	100	83.416	Mola_mola
ENSNBRG00000006805	parn	84	77.867	ENSMODG00000004915	PARN	99	77.867	Monodelphis_domestica
ENSNBRG00000006805	parn	100	87.542	ENSMALG00000019426	parn	100	87.542	Monopterus_albus
ENSNBRG00000006805	parn	90	74.532	MGP_CAROLIEiJ_G0020466	Parn	84	74.532	Mus_caroli
ENSNBRG00000006805	parn	90	73.970	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSNBRG00000006805	parn	90	74.719	MGP_PahariEiJ_G0016172	Parn	87	72.924	Mus_pahari
ENSNBRG00000006805	parn	90	74.532	MGP_SPRETEiJ_G0021361	Parn	84	74.532	Mus_spretus
ENSNBRG00000006805	parn	90	76.779	ENSMPUG00000014464	PARN	83	76.779	Mustela_putorius_furo
ENSNBRG00000006805	parn	83	75.502	ENSMLUG00000005414	PARN	100	75.758	Myotis_lucifugus
ENSNBRG00000006805	parn	90	76.966	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSNBRG00000006805	parn	78	65.000	ENSMEUG00000008178	-	72	65.000	Notamacropus_eugenii
ENSNBRG00000006805	parn	89	73.055	ENSOPRG00000012187	PARN	83	73.055	Ochotona_princeps
ENSNBRG00000006805	parn	90	71.563	ENSODEG00000001617	PARN	85	71.563	Octodon_degus
ENSNBRG00000006805	parn	93	95.818	ENSONIG00000000151	parn	100	83.591	Oreochromis_niloticus
ENSNBRG00000006805	parn	51	79.070	ENSOANG00000020155	-	77	79.070	Ornithorhynchus_anatinus
ENSNBRG00000006805	parn	92	75.368	ENSOCUG00000000322	PARN	85	75.368	Oryctolagus_cuniculus
ENSNBRG00000006805	parn	93	85.507	ENSORLG00020010313	parn	82	85.326	Oryzias_latipes_hni
ENSNBRG00000006805	parn	93	85.145	ENSORLG00015000300	parn	82	84.964	Oryzias_latipes_hsok
ENSNBRG00000006805	parn	93	84.783	ENSOMEG00000019555	parn	82	84.601	Oryzias_melastigma
ENSNBRG00000006805	parn	83	75.952	ENSOGAG00000014626	PARN	100	76.210	Otolemur_garnettii
ENSNBRG00000006805	parn	83	77.172	ENSOARG00000007574	PARN	100	77.172	Ovis_aries
ENSNBRG00000006805	parn	90	76.966	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSNBRG00000006805	parn	98	72.193	ENSPPRG00000018583	PARN	87	76.271	Panthera_pardus
ENSNBRG00000006805	parn	98	72.193	ENSPTIG00000012135	PARN	87	76.271	Panthera_tigris_altaica
ENSNBRG00000006805	parn	90	76.966	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSNBRG00000006805	parn	90	74.719	ENSPANG00000020099	PARN	83	75.094	Papio_anubis
ENSNBRG00000006805	parn	93	79.385	ENSPKIG00000022807	parn	87	76.619	Paramormyrops_kingsleyae
ENSNBRG00000006805	parn	95	74.377	ENSPSIG00000014804	PARN	87	74.377	Pelodiscus_sinensis
ENSNBRG00000006805	parn	94	81.867	ENSPMGG00000014431	parn	77	81.688	Periophthalmus_magnuspinnatus
ENSNBRG00000006805	parn	90	72.608	ENSPEMG00000018439	Parn	84	72.608	Peromyscus_maniculatus_bairdii
ENSNBRG00000006805	parn	88	67.052	ENSPMAG00000003956	parn	98	67.052	Petromyzon_marinus
ENSNBRG00000006805	parn	71	71.462	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSNBRG00000006805	parn	93	88.246	ENSPFOG00000012823	parn	81	88.246	Poecilia_formosa
ENSNBRG00000006805	parn	93	88.427	ENSPLAG00000006395	parn	81	88.427	Poecilia_latipinna
ENSNBRG00000006805	parn	93	88.065	ENSPMEG00000007711	parn	81	88.065	Poecilia_mexicana
ENSNBRG00000006805	parn	93	88.246	ENSPREG00000000147	parn	81	88.246	Poecilia_reticulata
ENSNBRG00000006805	parn	90	76.493	ENSPPYG00000007123	PARN	83	76.493	Pongo_abelii
ENSNBRG00000006805	parn	85	66.667	ENSPCAG00000001741	PARN	82	66.667	Procavia_capensis
ENSNBRG00000006805	parn	93	72.000	ENSPCOG00000019292	PARN	91	76.271	Propithecus_coquereli
ENSNBRG00000006805	parn	89	73.396	ENSPVAG00000002547	PARN	83	73.396	Pteropus_vampyrus
ENSNBRG00000006805	parn	100	91.568	ENSPNYG00000006835	parn	100	91.568	Pundamilia_nyererei
ENSNBRG00000006805	parn	84	81.010	ENSPNAG00000018905	parn	81	81.010	Pygocentrus_nattereri
ENSNBRG00000006805	parn	93	73.285	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSNBRG00000006805	parn	90	77.905	ENSSBOG00000034726	PARN	83	77.905	Saimiri_boliviensis_boliviensis
ENSNBRG00000006805	parn	70	75.837	ENSSHAG00000008493	PARN	93	75.837	Sarcophilus_harrisii
ENSNBRG00000006805	parn	93	78.947	ENSSFOG00015014165	parn	90	79.664	Scleropages_formosus
ENSNBRG00000006805	parn	93	86.618	ENSSMAG00000000685	parn	100	76.414	Scophthalmus_maximus
ENSNBRG00000006805	parn	93	91.155	ENSSDUG00000014555	parn	81	90.794	Seriola_dumerili
ENSNBRG00000006805	parn	73	77.701	ENSSARG00000014339	PARN	75	77.701	Sorex_araneus
ENSNBRG00000006805	parn	90	76.723	ENSSPUG00000007719	PARN	83	76.723	Sphenodon_punctatus
ENSNBRG00000006805	parn	93	91.273	ENSSPAG00000007095	parn	100	80.725	Stegastes_partitus
ENSNBRG00000006805	parn	98	71.675	ENSSSCG00000007878	PARN	81	71.675	Sus_scrofa
ENSNBRG00000006805	parn	94	73.921	ENSTGUG00000004971	PARN	87	74.101	Taeniopygia_guttata
ENSNBRG00000006805	parn	93	85.946	ENSTNIG00000008252	parn	88	86.667	Tetraodon_nigroviridis
ENSNBRG00000006805	parn	59	31.000	ENSTBEG00000009131	PNLDC1	68	32.000	Tupaia_belangeri
ENSNBRG00000006805	parn	80	64.496	ENSTBEG00000010407	PARN	81	64.496	Tupaia_belangeri
ENSNBRG00000006805	parn	82	76.797	ENSTTRG00000002843	PARN	77	76.797	Tursiops_truncatus
ENSNBRG00000006805	parn	73	71.167	ENSUAMG00000008283	PARN	94	68.605	Ursus_americanus
ENSNBRG00000006805	parn	90	76.779	ENSUMAG00000004527	PARN	83	76.779	Ursus_maritimus
ENSNBRG00000006805	parn	89	73.055	ENSVPAG00000008968	PARN	85	73.055	Vicugna_pacos
ENSNBRG00000006805	parn	90	76.404	ENSVVUG00000019509	PARN	90	71.848	Vulpes_vulpes
ENSNBRG00000006805	parn	90	74.242	ENSXETG00000010994	parn	100	74.242	Xenopus_tropicalis
ENSNBRG00000006805	parn	93	82.640	ENSXCOG00000015990	parn	93	82.640	Xiphophorus_couchianus
ENSNBRG00000006805	parn	93	87.342	ENSXMAG00000014783	parn	81	87.342	Xiphophorus_maculatus