EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000006978 (Gene tree)
Gene ID: 102795139
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 18426 bases
Position: chrJH422405.1:532224-550649
Accession: 102795139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000008913	RNase_Zc3h12a	PF11977.8	5.6e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000009170	-	6355	XM_006804956	ENSNBRP00000008913	963 (aa)	XP_006805019	UPI0003EC4211

Gene Model

Click here to download ENSNBRG00000006978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000006978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000006978	-	64	52.038	ENSNBRG00000012175	-	90	70.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000006978	-	79	83.984	ENSAPOG00000015355	-	82	83.594	Acanthochromis_polyacanthus
ENSNBRG00000006978	-	83	49.349	ENSAPOG00000001632	-	83	73.824	Acanthochromis_polyacanthus
ENSNBRG00000006978	-	100	74.457	ENSACIG00000001362	-	97	75.464	Amphilophus_citrinellus
ENSNBRG00000006978	-	99	85.965	ENSAOCG00000003866	-	98	86.716	Amphiprion_ocellaris
ENSNBRG00000006978	-	72	80.114	ENSAPEG00000018582	-	99	86.907	Amphiprion_percula
ENSNBRG00000006978	-	100	78.189	ENSAPEG00000005727	-	99	87.069	Amphiprion_percula
ENSNBRG00000006978	-	100	83.967	ENSATEG00000004134	-	100	83.659	Anabas_testudineus
ENSNBRG00000006978	-	83	48.148	ENSATEG00000002260	-	83	81.116	Anabas_testudineus
ENSNBRG00000006978	-	100	99.065	ENSACLG00000027924	-	100	99.065	Astatotilapia_calliptera
ENSNBRG00000006978	-	64	53.651	ENSACLG00000018493	-	99	44.390	Astatotilapia_calliptera
ENSNBRG00000006978	-	86	77.851	ENSCSEG00000010073	-	96	83.860	Cynoglossus_semilaevis
ENSNBRG00000006978	-	83	47.557	ENSCSEG00000008542	-	99	43.762	Cynoglossus_semilaevis
ENSNBRG00000006978	-	100	76.440	ENSCVAG00000002328	-	100	76.308	Cyprinodon_variegatus
ENSNBRG00000006978	-	83	57.875	ENSELUG00000009319	-	95	57.805	Esox_lucius
ENSNBRG00000006978	-	83	50.474	ENSELUG00000005470	-	100	48.152	Esox_lucius
ENSNBRG00000006978	-	91	87.500	ENSFHEG00000021225	-	100	87.500	Fundulus_heteroclitus
ENSNBRG00000006978	-	70	50.000	ENSGMOG00000017975	-	100	50.000	Gadus_morhua
ENSNBRG00000006978	-	100	74.127	ENSGAFG00000005290	-	100	73.690	Gambusia_affinis
ENSNBRG00000006978	-	72	71.490	ENSGACG00000014201	-	100	77.739	Gasterosteus_aculeatus
ENSNBRG00000006978	-	64	60.000	ENSGACG00000001339	-	99	45.000	Gasterosteus_aculeatus
ENSNBRG00000006978	-	100	98.754	ENSHBUG00000006831	-	100	98.754	Haplochromis_burtoni
ENSNBRG00000006978	-	100	63.731	ENSHCOG00000008878	-	99	87.755	Hippocampus_comes
ENSNBRG00000006978	-	100	75.873	ENSKMAG00000011694	-	100	75.590	Kryptolebias_marmoratus
ENSNBRG00000006978	-	97	79.409	ENSLBEG00000012554	-	99	84.328	Labrus_bergylta
ENSNBRG00000006978	-	100	79.735	ENSLBEG00000003547	-	100	79.492	Labrus_bergylta
ENSNBRG00000006978	-	83	48.694	ENSLBEG00000012710	-	99	45.854	Labrus_bergylta
ENSNBRG00000006978	-	99	76.771	ENSMAMG00000021794	-	98	87.454	Mastacembelus_armatus
ENSNBRG00000006978	-	83	49.698	ENSMAMG00000020372	-	99	44.521	Mastacembelus_armatus
ENSNBRG00000006978	-	100	98.962	ENSMZEG00005007718	-	100	98.962	Maylandia_zebra
ENSNBRG00000006978	-	64	53.651	ENSMZEG00005019137	-	90	70.323	Maylandia_zebra
ENSNBRG00000006978	-	91	84.722	ENSMMOG00000005728	-	99	83.578	Mola_mola
ENSNBRG00000006978	-	83	48.798	ENSMMOG00000019526	-	79	49.281	Mola_mola
ENSNBRG00000006978	-	100	80.330	ENSMALG00000010501	-	100	80.536	Monopterus_albus
ENSNBRG00000006978	-	100	97.720	ENSONIG00000012268	-	100	97.720	Oreochromis_niloticus
ENSNBRG00000006978	-	94	77.778	ENSORLG00000029243	-	99	79.567	Oryzias_latipes
ENSNBRG00000006978	-	100	75.415	ENSORLG00020017005	-	100	76.141	Oryzias_latipes_hni
ENSNBRG00000006978	-	100	75.415	ENSORLG00015015211	-	100	75.620	Oryzias_latipes_hsok
ENSNBRG00000006978	-	100	76.867	ENSOMEG00000006666	-	100	76.995	Oryzias_melastigma
ENSNBRG00000006978	-	66	78.481	ENSPMGG00000009790	-	93	78.797	Periophthalmus_magnuspinnatus
ENSNBRG00000006978	-	100	75.770	ENSPLAG00000009867	-	100	75.334	Poecilia_latipinna
ENSNBRG00000006978	-	100	76.186	ENSPMEG00000006624	-	100	75.748	Poecilia_mexicana
ENSNBRG00000006978	-	86	63.636	ENSPMEG00000011676	-	99	42.376	Poecilia_mexicana
ENSNBRG00000006978	-	83	47.500	ENSPREG00000001607	-	73	80.263	Poecilia_reticulata
ENSNBRG00000006978	-	100	75.848	ENSPREG00000010838	-	100	75.412	Poecilia_reticulata
ENSNBRG00000006978	-	99	45.121	ENSSMAG00000007258	-	99	45.605	Scophthalmus_maximus
ENSNBRG00000006978	-	100	83.128	ENSSMAG00000007545	-	100	82.172	Scophthalmus_maximus
ENSNBRG00000006978	-	83	51.728	ENSSDUG00000013237	-	90	66.225	Seriola_dumerili
ENSNBRG00000006978	-	100	85.451	ENSSDUG00000021864	-	100	85.041	Seriola_dumerili
ENSNBRG00000006978	-	100	85.348	ENSSLDG00000012268	-	100	84.734	Seriola_lalandi_dorsalis
ENSNBRG00000006978	-	83	51.914	ENSSLDG00000004886	-	99	46.050	Seriola_lalandi_dorsalis
ENSNBRG00000006978	-	99	46.588	ENSSPAG00000001850	-	99	45.331	Stegastes_partitus
ENSNBRG00000006978	-	100	88.284	ENSSPAG00000009485	-	100	88.181	Stegastes_partitus
ENSNBRG00000006978	-	99	75.439	ENSTRUG00000022519	-	99	75.180	Takifugu_rubripes
ENSNBRG00000006978	-	62	75.833	ENSTNIG00000014519	-	97	90.244	Tetraodon_nigroviridis
ENSNBRG00000006978	-	100	75.334	ENSXMAG00000027171	-	100	75.000	Xiphophorus_maculatus
ENSNBRG00000006978	-	83	47.337	ENSXMAG00000014715	-	83	80.435	Xiphophorus_maculatus