EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000007197 (Gene tree)
Gene ID: 102780705
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3B subunit 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 19035 bases
Position: chrJH422322.1:3091906-3110940
Accession: 102780705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000009270	CPSF_A	PF03178.15	4.8e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000009533	-	2844	XM_006797457	ENSNBRP00000009270	947 (aa)	XP_006797520	-

Gene Model

Click here to download ENSNBRG00000007197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007197	sf3b3	99	97.222	ENSG00000189091	SF3B3	83	97.222	Homo_sapiens
ENSNBRG00000007197	sf3b3	95	97.222	ENSAPOG00000006172	sf3b3	81	97.222	Acanthochromis_polyacanthus
ENSNBRG00000007197	sf3b3	99	97.222	ENSAMEG00000002187	SF3B3	83	97.222	Ailuropoda_melanoleuca
ENSNBRG00000007197	sf3b3	99	97.222	ENSACIG00000016487	sf3b3	90	97.222	Amphilophus_citrinellus
ENSNBRG00000007197	sf3b3	99	97.222	ENSAOCG00000007158	sf3b3	83	97.222	Amphiprion_ocellaris
ENSNBRG00000007197	sf3b3	99	97.222	ENSAPEG00000022786	sf3b3	83	97.222	Amphiprion_percula
ENSNBRG00000007197	sf3b3	99	97.222	ENSATEG00000013708	sf3b3	83	97.222	Anabas_testudineus
ENSNBRG00000007197	sf3b3	79	91.667	ENSAPLG00000004996	SF3B3	80	91.667	Anas_platyrhynchos
ENSNBRG00000007197	sf3b3	99	91.667	ENSACAG00000001817	SF3B3	83	91.667	Anolis_carolinensis
ENSNBRG00000007197	sf3b3	99	97.222	ENSANAG00000028001	SF3B3	83	97.222	Aotus_nancymaae
ENSNBRG00000007197	sf3b3	99	97.222	ENSACLG00000022555	sf3b3	90	97.222	Astatotilapia_calliptera
ENSNBRG00000007197	sf3b3	99	94.444	ENSAMXG00000003410	sf3b3	83	94.444	Astyanax_mexicanus
ENSNBRG00000007197	sf3b3	99	97.222	ENSBTAG00000010627	SF3B3	83	97.222	Bos_taurus
ENSNBRG00000007197	sf3b3	99	74.286	WBGene00019323	teg-4	84	74.286	Caenorhabditis_elegans
ENSNBRG00000007197	sf3b3	99	97.222	ENSCJAG00000014773	SF3B3	90	97.222	Callithrix_jacchus
ENSNBRG00000007197	sf3b3	99	97.222	ENSCAFG00000020151	SF3B3	83	97.222	Canis_familiaris
ENSNBRG00000007197	sf3b3	99	97.222	ENSCAFG00020020912	SF3B3	83	97.222	Canis_lupus_dingo
ENSNBRG00000007197	sf3b3	99	97.222	ENSCHIG00000019822	SF3B3	83	97.222	Capra_hircus
ENSNBRG00000007197	sf3b3	99	97.222	ENSTSYG00000007910	SF3B3	83	97.222	Carlito_syrichta
ENSNBRG00000007197	sf3b3	80	73.227	ENSCAPG00000001484	SF3B3	82	73.227	Cavia_aperea
ENSNBRG00000007197	sf3b3	99	97.222	ENSCPOG00000000586	SF3B3	83	97.222	Cavia_porcellus
ENSNBRG00000007197	sf3b3	99	97.222	ENSCCAG00000017736	SF3B3	83	97.222	Cebus_capucinus
ENSNBRG00000007197	sf3b3	99	97.222	ENSCATG00000036562	SF3B3	83	97.222	Cercocebus_atys
ENSNBRG00000007197	sf3b3	99	97.222	ENSCLAG00000003921	SF3B3	83	97.222	Chinchilla_lanigera
ENSNBRG00000007197	sf3b3	99	97.222	ENSCSAG00000004371	SF3B3	83	97.222	Chlorocebus_sabaeus
ENSNBRG00000007197	sf3b3	83	97.619	ENSCHOG00000001878	SF3B3	67	97.619	Choloepus_hoffmanni
ENSNBRG00000007197	sf3b3	99	97.222	ENSCPBG00000015853	SF3B3	83	97.222	Chrysemys_picta_bellii
ENSNBRG00000007197	sf3b3	99	88.571	ENSCING00000001342	-	84	88.571	Ciona_intestinalis
ENSNBRG00000007197	sf3b3	99	91.429	ENSCSAVG00000011454	-	84	91.429	Ciona_savignyi
ENSNBRG00000007197	sf3b3	99	97.222	ENSCANG00000042920	SF3B3	83	97.222	Colobus_angolensis_palliatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSCGRG00001015908	Sf3b3	83	97.222	Cricetulus_griseus_chok1gshd
ENSNBRG00000007197	sf3b3	99	97.222	ENSCGRG00000010180	Sf3b3	83	97.222	Cricetulus_griseus_crigri
ENSNBRG00000007197	sf3b3	81	97.222	ENSCSEG00000014192	sf3b3	80	97.222	Cynoglossus_semilaevis
ENSNBRG00000007197	sf3b3	99	94.286	ENSCVAG00000010459	sf3b3	83	94.286	Cyprinodon_variegatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSDARG00000103553	sf3b3	83	97.222	Danio_rerio
ENSNBRG00000007197	sf3b3	96	82.755	ENSDNOG00000043626	SF3B3	95	82.755	Dasypus_novemcinctus
ENSNBRG00000007197	sf3b3	99	97.222	ENSDORG00000014176	Sf3b3	83	97.222	Dipodomys_ordii
ENSNBRG00000007197	sf3b3	99	82.857	FBgn0035162	Sf3b3	84	82.857	Drosophila_melanogaster
ENSNBRG00000007197	sf3b3	74	97.222	ENSETEG00000002729	SF3B3	61	97.222	Echinops_telfairi
ENSNBRG00000007197	sf3b3	99	91.429	ENSEBUG00000006117	sf3b3	83	91.429	Eptatretus_burgeri
ENSNBRG00000007197	sf3b3	99	97.222	ENSEASG00005013376	SF3B3	83	97.222	Equus_asinus_asinus
ENSNBRG00000007197	sf3b3	99	97.222	ENSECAG00000014053	SF3B3	83	97.222	Equus_caballus
ENSNBRG00000007197	sf3b3	90	88.889	ENSEEUG00000015611	SF3B3	76	88.889	Erinaceus_europaeus
ENSNBRG00000007197	sf3b3	99	97.222	ENSELUG00000015417	sf3b3	83	97.222	Esox_lucius
ENSNBRG00000007197	sf3b3	99	97.222	ENSFCAG00000009487	SF3B3	83	97.222	Felis_catus
ENSNBRG00000007197	sf3b3	99	91.667	ENSFALG00000007372	SF3B3	83	91.667	Ficedula_albicollis
ENSNBRG00000007197	sf3b3	99	97.222	ENSFDAG00000002608	SF3B3	83	97.222	Fukomys_damarensis
ENSNBRG00000007197	sf3b3	99	97.143	ENSFHEG00000017824	sf3b3	85	97.143	Fundulus_heteroclitus
ENSNBRG00000007197	sf3b3	99	97.222	ENSGMOG00000008139	sf3b3	83	97.222	Gadus_morhua
ENSNBRG00000007197	sf3b3	99	91.667	ENSGALG00000002531	SF3B3	83	91.667	Gallus_gallus
ENSNBRG00000007197	sf3b3	99	94.286	ENSGAFG00000015206	sf3b3	83	94.286	Gambusia_affinis
ENSNBRG00000007197	sf3b3	99	97.222	ENSGACG00000002646	sf3b3	83	97.222	Gasterosteus_aculeatus
ENSNBRG00000007197	sf3b3	95	97.222	ENSGAGG00000006746	SF3B3	80	97.222	Gopherus_agassizii
ENSNBRG00000007197	sf3b3	99	97.222	ENSGGOG00000003246	SF3B3	83	97.222	Gorilla_gorilla
ENSNBRG00000007197	sf3b3	99	97.222	ENSHBUG00000005960	sf3b3	90	97.222	Haplochromis_burtoni
ENSNBRG00000007197	sf3b3	99	97.222	ENSHGLG00000010135	SF3B3	83	97.222	Heterocephalus_glaber_female
ENSNBRG00000007197	sf3b3	99	97.222	ENSHGLG00100011148	SF3B3	84	97.222	Heterocephalus_glaber_male
ENSNBRG00000007197	sf3b3	99	97.222	ENSHCOG00000011981	sf3b3	90	97.222	Hippocampus_comes
ENSNBRG00000007197	sf3b3	99	94.444	ENSIPUG00000020435	sf3b3	83	94.444	Ictalurus_punctatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSSTOG00000007065	SF3B3	83	97.222	Ictidomys_tridecemlineatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSJJAG00000003948	Sf3b3	83	97.222	Jaculus_jaculus
ENSNBRG00000007197	sf3b3	99	94.286	ENSKMAG00000004066	sf3b3	83	94.286	Kryptolebias_marmoratus
ENSNBRG00000007197	sf3b3	99	97.222	ENSLBEG00000018302	sf3b3	83	97.222	Labrus_bergylta
ENSNBRG00000007197	sf3b3	99	91.667	ENSLACG00000012501	SF3B3	85	91.667	Latimeria_chalumnae
ENSNBRG00000007197	sf3b3	99	94.444	ENSLOCG00000007566	sf3b3	83	94.444	Lepisosteus_oculatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSLAFG00000012219	SF3B3	100	80.925	Loxodonta_africana
ENSNBRG00000007197	sf3b3	99	97.222	ENSMFAG00000045487	SF3B3	83	97.222	Macaca_fascicularis
ENSNBRG00000007197	sf3b3	99	97.222	ENSMMUG00000017812	SF3B3	83	97.222	Macaca_mulatta
ENSNBRG00000007197	sf3b3	99	97.222	ENSMNEG00000033385	SF3B3	83	97.222	Macaca_nemestrina
ENSNBRG00000007197	sf3b3	99	97.222	ENSMLEG00000043891	SF3B3	85	97.222	Mandrillus_leucophaeus
ENSNBRG00000007197	sf3b3	99	97.222	ENSMAMG00000016837	sf3b3	83	97.222	Mastacembelus_armatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSMZEG00005010836	sf3b3	90	97.222	Maylandia_zebra
ENSNBRG00000007197	sf3b3	96	93.031	ENSMZEG00005026015	sf3b3	90	93.031	Maylandia_zebra
ENSNBRG00000007197	sf3b3	99	91.667	ENSMGAG00000001597	SF3B3	83	91.667	Meleagris_gallopavo
ENSNBRG00000007197	sf3b3	74	76.705	ENSMAUG00000013618	Sf3b3	74	76.705	Mesocricetus_auratus
ENSNBRG00000007197	sf3b3	99	97.222	ENSMICG00000001363	SF3B3	84	97.222	Microcebus_murinus
ENSNBRG00000007197	sf3b3	99	97.222	ENSMOCG00000006108	Sf3b3	83	97.222	Microtus_ochrogaster
ENSNBRG00000007197	sf3b3	96	91.130	ENSMMOG00000002598	sf3b3	88	91.130	Mola_mola
ENSNBRG00000007197	sf3b3	99	97.222	ENSMODG00000014363	SF3B3	84	97.222	Monodelphis_domestica
ENSNBRG00000007197	sf3b3	99	97.222	ENSMALG00000008014	sf3b3	83	97.222	Monopterus_albus
ENSNBRG00000007197	sf3b3	99	97.222	MGP_CAROLIEiJ_G0031563	Sf3b3	83	97.222	Mus_caroli
ENSNBRG00000007197	sf3b3	99	97.222	ENSMUSG00000033732	Sf3b3	83	97.222	Mus_musculus
ENSNBRG00000007197	sf3b3	99	97.222	MGP_SPRETEiJ_G0032681	Sf3b3	83	97.222	Mus_spretus
ENSNBRG00000007197	sf3b3	99	97.222	ENSMPUG00000010277	SF3B3	83	97.222	Mustela_putorius_furo
ENSNBRG00000007197	sf3b3	99	97.222	ENSMLUG00000014607	SF3B3	84	97.222	Myotis_lucifugus
ENSNBRG00000007197	sf3b3	99	97.222	ENSNGAG00000021903	Sf3b3	83	97.222	Nannospalax_galili
ENSNBRG00000007197	sf3b3	100	92.683	ENSNLEG00000016127	SF3B3	84	92.683	Nomascus_leucogenys
ENSNBRG00000007197	sf3b3	90	97.222	ENSMEUG00000004479	SF3B3	77	97.222	Notamacropus_eugenii
ENSNBRG00000007197	sf3b3	95	97.222	ENSOPRG00000009847	SF3B3	82	97.222	Ochotona_princeps
ENSNBRG00000007197	sf3b3	99	97.222	ENSODEG00000014154	SF3B3	83	97.222	Octodon_degus
ENSNBRG00000007197	sf3b3	99	97.222	ENSONIG00000011198	sf3b3	83	97.222	Oreochromis_niloticus
ENSNBRG00000007197	sf3b3	99	97.222	ENSOANG00000001161	-	83	97.222	Ornithorhynchus_anatinus
ENSNBRG00000007197	sf3b3	99	97.222	ENSOCUG00000004139	SF3B3	83	97.222	Oryctolagus_cuniculus
ENSNBRG00000007197	sf3b3	99	94.444	ENSORLG00000013472	sf3b3	90	94.444	Oryzias_latipes
ENSNBRG00000007197	sf3b3	99	94.444	ENSORLG00020017473	sf3b3	90	94.444	Oryzias_latipes_hni
ENSNBRG00000007197	sf3b3	99	94.444	ENSORLG00015007710	sf3b3	90	94.444	Oryzias_latipes_hsok
ENSNBRG00000007197	sf3b3	99	94.444	ENSOMEG00000014483	sf3b3	83	94.444	Oryzias_melastigma
ENSNBRG00000007197	sf3b3	99	97.222	ENSOGAG00000016051	SF3B3	83	97.222	Otolemur_garnettii
ENSNBRG00000007197	sf3b3	99	97.222	ENSOARG00000004816	SF3B3	84	97.222	Ovis_aries
ENSNBRG00000007197	sf3b3	99	97.222	ENSPPAG00000026807	SF3B3	83	97.222	Pan_paniscus
ENSNBRG00000007197	sf3b3	99	97.222	ENSPPRG00000001686	SF3B3	83	97.222	Panthera_pardus
ENSNBRG00000007197	sf3b3	96	85.744	ENSPTIG00000020382	SF3B3	90	85.744	Panthera_tigris_altaica
ENSNBRG00000007197	sf3b3	99	97.222	ENSPTRG00000008308	SF3B3	83	97.222	Pan_troglodytes
ENSNBRG00000007197	sf3b3	99	97.222	ENSPANG00000024075	SF3B3	83	97.222	Papio_anubis
ENSNBRG00000007197	sf3b3	99	94.444	ENSPKIG00000002712	sf3b3	90	94.444	Paramormyrops_kingsleyae
ENSNBRG00000007197	sf3b3	96	82.653	ENSPSIG00000002232	SF3B3	90	82.653	Pelodiscus_sinensis
ENSNBRG00000007197	sf3b3	50	90.258	ENSPMGG00000016960	sf3b3	100	90.258	Periophthalmus_magnuspinnatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSPEMG00000008603	Sf3b3	83	97.222	Peromyscus_maniculatus_bairdii
ENSNBRG00000007197	sf3b3	99	91.429	ENSPMAG00000001793	sf3b3	83	91.429	Petromyzon_marinus
ENSNBRG00000007197	sf3b3	99	97.222	ENSPCIG00000014927	SF3B3	87	97.222	Phascolarctos_cinereus
ENSNBRG00000007197	sf3b3	99	94.286	ENSPFOG00000015516	sf3b3	83	94.286	Poecilia_formosa
ENSNBRG00000007197	sf3b3	99	94.286	ENSPLAG00000014330	sf3b3	83	94.286	Poecilia_latipinna
ENSNBRG00000007197	sf3b3	99	94.286	ENSPMEG00000019856	sf3b3	83	94.286	Poecilia_mexicana
ENSNBRG00000007197	sf3b3	78	94.286	ENSPREG00000019669	sf3b3	77	94.286	Poecilia_reticulata
ENSNBRG00000007197	sf3b3	100	79.849	ENSPPYG00000007539	SF3B3	92	79.849	Pongo_abelii
ENSNBRG00000007197	sf3b3	95	97.222	ENSPCAG00000002623	SF3B3	80	97.222	Procavia_capensis
ENSNBRG00000007197	sf3b3	76	97.222	ENSPCOG00000026582	SF3B3	73	97.222	Propithecus_coquereli
ENSNBRG00000007197	sf3b3	99	97.222	ENSPVAG00000000684	SF3B3	83	97.222	Pteropus_vampyrus
ENSNBRG00000007197	sf3b3	99	97.222	ENSPNYG00000003528	sf3b3	90	97.222	Pundamilia_nyererei
ENSNBRG00000007197	sf3b3	99	94.444	ENSPNAG00000015419	sf3b3	83	94.444	Pygocentrus_nattereri
ENSNBRG00000007197	sf3b3	99	97.222	ENSRNOG00000017724	Sf3b3	83	97.222	Rattus_norvegicus
ENSNBRG00000007197	sf3b3	99	97.222	ENSRBIG00000021904	SF3B3	83	97.222	Rhinopithecus_bieti
ENSNBRG00000007197	sf3b3	99	97.222	ENSRROG00000045703	SF3B3	83	97.222	Rhinopithecus_roxellana
ENSNBRG00000007197	sf3b3	68	41.935	YML049C	-	64	41.935	Saccharomyces_cerevisiae
ENSNBRG00000007197	sf3b3	99	97.222	ENSSBOG00000029156	SF3B3	83	97.222	Saimiri_boliviensis_boliviensis
ENSNBRG00000007197	sf3b3	99	97.222	ENSSHAG00000000372	SF3B3	87	97.222	Sarcophilus_harrisii
ENSNBRG00000007197	sf3b3	99	91.667	ENSSFOG00015012877	sf3b3	90	91.667	Scleropages_formosus
ENSNBRG00000007197	sf3b3	99	97.222	ENSSMAG00000014386	sf3b3	83	97.222	Scophthalmus_maximus
ENSNBRG00000007197	sf3b3	99	97.222	ENSSDUG00000021201	sf3b3	83	97.222	Seriola_dumerili
ENSNBRG00000007197	sf3b3	99	97.222	ENSSLDG00000017532	sf3b3	83	97.222	Seriola_lalandi_dorsalis
ENSNBRG00000007197	sf3b3	91	97.222	ENSSARG00000006917	SF3B3	74	97.222	Sorex_araneus
ENSNBRG00000007197	sf3b3	99	94.444	ENSSPUG00000006253	SF3B3	83	94.444	Sphenodon_punctatus
ENSNBRG00000007197	sf3b3	100	79.390	ENSSPAG00000003125	sf3b3	92	79.390	Stegastes_partitus
ENSNBRG00000007197	sf3b3	99	97.222	ENSSSCG00000025323	SF3B3	90	97.222	Sus_scrofa
ENSNBRG00000007197	sf3b3	99	91.667	ENSTGUG00000006082	SF3B3	83	91.667	Taeniopygia_guttata
ENSNBRG00000007197	sf3b3	58	84.755	ENSTRUG00000015623	sf3b3	88	78.595	Takifugu_rubripes
ENSNBRG00000007197	sf3b3	50	65.319	ENSTRUG00000016719	-	100	65.319	Takifugu_rubripes
ENSNBRG00000007197	sf3b3	86	97.222	ENSTNIG00000004857	sf3b3	79	97.222	Tetraodon_nigroviridis
ENSNBRG00000007197	sf3b3	91	100.000	ENSTBEG00000002946	SF3B3	82	100.000	Tupaia_belangeri
ENSNBRG00000007197	sf3b3	99	97.222	ENSTTRG00000005855	SF3B3	83	97.222	Tursiops_truncatus
ENSNBRG00000007197	sf3b3	99	97.222	ENSUAMG00000006780	SF3B3	83	97.222	Ursus_americanus
ENSNBRG00000007197	sf3b3	99	97.222	ENSUMAG00000017757	SF3B3	83	97.222	Ursus_maritimus
ENSNBRG00000007197	sf3b3	99	100.000	ENSVPAG00000003202	SF3B3	83	100.000	Vicugna_pacos
ENSNBRG00000007197	sf3b3	99	97.222	ENSVVUG00000017922	SF3B3	83	97.222	Vulpes_vulpes
ENSNBRG00000007197	sf3b3	99	94.444	ENSXETG00000032869	SF3B3	83	94.444	Xenopus_tropicalis
ENSNBRG00000007197	sf3b3	74	94.286	ENSXCOG00000013628	sf3b3	76	94.286	Xiphophorus_couchianus
ENSNBRG00000007197	sf3b3	99	94.286	ENSXMAG00000006334	sf3b3	83	94.286	Xiphophorus_maculatus