EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000007276 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6672 bases
Position: chrJH422416.1:613636-620307
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000009315	zf-C2H2	PF00096.26	9.2e-18	1	3
ENSNBRP00000009315	zf-C2H2	PF00096.26	9.2e-18	2	3
ENSNBRP00000009315	zf-C2H2	PF00096.26	9.2e-18	3	3
ENSNBRP00000009315	zf-met	PF12874.7	9.2e-07	1	2
ENSNBRP00000009315	zf-met	PF12874.7	9.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000009582	-	843	-	ENSNBRP00000009315	280 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000007276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000007276	-	65	45.977	ENSNBRG00000001641	-	68	44.186
ENSNBRG00000007276	-	50	42.991	ENSNBRG00000023229	-	76	42.991
ENSNBRG00000007276	-	58	42.056	ENSNBRG00000007602	-	87	42.056
ENSNBRG00000007276	-	57	40.496	ENSNBRG00000008123	-	79	40.496
ENSNBRG00000007276	-	50	41.270	ENSNBRG00000006125	-	90	41.270
ENSNBRG00000007276	-	62	39.200	ENSNBRG00000016582	-	84	39.200
ENSNBRG00000007276	-	63	41.593	ENSNBRG00000000523	-	66	41.593
ENSNBRG00000007276	-	63	42.975	ENSNBRG00000007384	-	51	42.975
ENSNBRG00000007276	-	75	31.061	ENSNBRG00000007221	scrt2	66	31.061
ENSNBRG00000007276	-	54	43.802	ENSNBRG00000004557	-	84	43.802
ENSNBRG00000007276	-	71	43.307	ENSNBRG00000006445	-	54	43.307
ENSNBRG00000007276	-	73	41.322	ENSNBRG00000005823	-	79	41.322
ENSNBRG00000007276	-	62	38.333	ENSNBRG00000024046	-	60	38.333
ENSNBRG00000007276	-	50	41.221	ENSNBRG00000010194	-	79	41.538
ENSNBRG00000007276	-	62	41.600	ENSNBRG00000016550	-	85	41.600
ENSNBRG00000007276	-	52	38.532	ENSNBRG00000009811	-	90	38.532
ENSNBRG00000007276	-	50	50.649	ENSNBRG00000003000	-	80	50.649
ENSNBRG00000007276	-	69	40.650	ENSNBRG00000016564	-	79	40.650
ENSNBRG00000007276	-	52	41.250	ENSNBRG00000018718	zbtb47b	71	41.250
ENSNBRG00000007276	-	71	32.479	ENSNBRG00000014882	-	64	32.479
ENSNBRG00000007276	-	63	40.157	ENSNBRG00000005796	-	92	40.157
ENSNBRG00000007276	-	50	37.500	ENSNBRG00000024014	-	56	37.500
ENSNBRG00000007276	-	53	35.000	ENSNBRG00000023960	-	84	35.000
ENSNBRG00000007276	-	65	40.594	ENSNBRG00000009075	znf236	91	34.454
ENSNBRG00000007276	-	64	38.843	ENSNBRG00000003250	-	89	40.336
ENSNBRG00000007276	-	72	40.506	ENSNBRG00000021375	-	60	40.506
ENSNBRG00000007276	-	67	42.593	ENSNBRG00000014088	-	99	42.683
ENSNBRG00000007276	-	51	42.373	ENSNBRG00000002946	-	53	42.373
ENSNBRG00000007276	-	57	43.902	ENSNBRG00000000708	-	87	43.902
ENSNBRG00000007276	-	53	38.636	ENSNBRG00000000305	-	78	38.636
ENSNBRG00000007276	-	53	44.262	ENSNBRG00000004822	-	51	43.750
ENSNBRG00000007276	-	51	43.802	ENSNBRG00000008106	-	92	43.802
ENSNBRG00000007276	-	67	41.558	ENSNBRG00000009279	-	91	41.558
ENSNBRG00000007276	-	50	38.211	ENSNBRG00000000321	-	95	41.121
ENSNBRG00000007276	-	55	42.056	ENSNBRG00000005849	-	84	42.056
ENSNBRG00000007276	-	72	39.726	ENSNBRG00000006411	-	92	39.726
ENSNBRG00000007276	-	52	42.975	ENSNBRG00000000492	-	68	42.975
ENSNBRG00000007276	-	68	44.882	ENSNBRG00000024345	-	97	44.882
ENSNBRG00000007276	-	75	31.034	ENSNBRG00000021998	-	68	31.034
ENSNBRG00000007276	-	50	37.838	ENSNBRG00000011785	snai2	55	37.838
ENSNBRG00000007276	-	53	46.032	ENSNBRG00000013501	-	86	46.032
ENSNBRG00000007276	-	55	42.342	ENSNBRG00000009815	-	78	42.342
ENSNBRG00000007276	-	65	31.928	ENSNBRG00000006757	-	72	36.905
ENSNBRG00000007276	-	50	45.361	ENSNBRG00000013583	-	89	45.361
ENSNBRG00000007276	-	65	41.071	ENSNBRG00000019881	-	57	41.071
ENSNBRG00000007276	-	63	42.553	ENSNBRG00000001608	-	94	42.553
ENSNBRG00000007276	-	53	41.441	ENSNBRG00000004381	-	75	41.441
ENSNBRG00000007276	-	55	39.344	ENSNBRG00000019481	-	91	39.344
ENSNBRG00000007276	-	60	42.391	ENSNBRG00000010987	-	74	35.556
ENSNBRG00000007276	-	54	38.843	ENSNBRG00000024019	-	95	38.843
ENSNBRG00000007276	-	71	39.604	ENSNBRG00000001761	-	75	39.604
ENSNBRG00000007276	-	50	39.167	ENSNBRG00000021237	-	77	39.167
ENSNBRG00000007276	-	50	43.617	ENSNBRG00000008827	znf319b	89	43.617
ENSNBRG00000007276	-	61	36.620	ENSNBRG00000013604	-	83	36.620
ENSNBRG00000007276	-	55	45.977	ENSNBRG00000015873	-	94	45.977
ENSNBRG00000007276	-	68	38.636	ENSNBRG00000016603	-	93	38.636
ENSNBRG00000007276	-	57	36.290	ENSNBRG00000004976	prdm5	68	36.290
ENSNBRG00000007276	-	67	44.330	ENSNBRG00000015442	ZNF319	96	44.628
ENSNBRG00000007276	-	52	45.745	ENSNBRG00000010405	-	75	52.174
ENSNBRG00000007276	-	75	36.905	ENSNBRG00000002902	-	99	37.190
ENSNBRG00000007276	-	57	39.241	ENSNBRG00000024020	-	62	39.241
ENSNBRG00000007276	-	65	39.098	ENSNBRG00000024344	-	76	39.098
ENSNBRG00000007276	-	52	39.815	ENSNBRG00000015652	-	83	39.815
ENSNBRG00000007276	-	63	37.168	ENSNBRG00000019004	-	78	37.168
ENSNBRG00000007276	-	58	40.230	ENSNBRG00000024051	-	53	40.230
ENSNBRG00000007276	-	55	43.519	ENSNBRG00000004523	-	87	43.519
ENSNBRG00000007276	-	76	41.935	ENSNBRG00000008223	-	79	43.210
ENSNBRG00000007276	-	91	45.082	ENSNBRG00000003124	-	97	45.082
ENSNBRG00000007276	-	57	40.000	ENSNBRG00000001163	-	90	45.669
ENSNBRG00000007276	-	63	44.000	ENSNBRG00000000960	-	99	41.538
ENSNBRG00000007276	-	78	37.415	ENSNBRG00000005805	-	94	39.837
ENSNBRG00000007276	-	52	44.094	ENSNBRG00000016169	-	65	44.094
ENSNBRG00000007276	-	76	38.843	ENSNBRG00000016666	-	97	38.843
ENSNBRG00000007276	-	72	41.270	ENSNBRG00000016234	-	66	41.270
ENSNBRG00000007276	-	53	39.024	ENSNBRG00000016577	si:dkey-182i3.9	89	39.024
ENSNBRG00000007276	-	58	43.529	ENSNBRG00000024086	-	67	43.529
ENSNBRG00000007276	-	57	40.870	ENSNBRG00000009128	-	60	40.870
ENSNBRG00000007276	-	71	39.623	ENSNBRG00000024066	-	97	39.623
ENSNBRG00000007276	-	57	43.966	ENSNBRG00000024179	-	61	43.966
ENSNBRG00000007276	-	63	40.458	ENSNBRG00000024293	-	85	40.458
ENSNBRG00000007276	-	61	38.750	ENSNBRG00000012391	gfi1b	51	38.750
ENSNBRG00000007276	-	78	42.520	ENSNBRG00000016282	-	95	45.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007276	-	57	42.857	ENSACAG00000008664	-	69	42.857	Anolis_carolinensis
ENSNBRG00000007276	-	52	41.509	ENSACAG00000024956	-	77	41.509	Anolis_carolinensis
ENSNBRG00000007276	-	69	38.028	ENSAMXG00000035246	-	67	38.028	Astyanax_mexicanus
ENSNBRG00000007276	-	53	45.082	ENSAMXG00000010805	-	95	45.082	Astyanax_mexicanus
ENSNBRG00000007276	-	64	39.850	ENSAMXG00000042784	-	96	41.284	Astyanax_mexicanus
ENSNBRG00000007276	-	70	44.000	ENSAMXG00000036233	-	86	44.000	Astyanax_mexicanus
ENSNBRG00000007276	-	65	45.946	ENSAMXG00000038536	-	89	45.946	Astyanax_mexicanus
ENSNBRG00000007276	-	59	45.000	ENSAMXG00000042746	-	89	45.000	Astyanax_mexicanus
ENSNBRG00000007276	-	79	48.315	ENSAMXG00000040198	-	50	48.315	Astyanax_mexicanus
ENSNBRG00000007276	-	58	44.915	ENSAMXG00000034847	-	89	44.915	Astyanax_mexicanus
ENSNBRG00000007276	-	62	46.281	ENSAMXG00000025452	-	97	46.281	Astyanax_mexicanus
ENSNBRG00000007276	-	50	43.651	ENSAMXG00000032841	-	77	43.651	Astyanax_mexicanus
ENSNBRG00000007276	-	67	45.312	ENSBTAG00000038322	-	93	45.312	Bos_taurus
ENSNBRG00000007276	-	50	42.975	ENSCPBG00000001526	-	80	42.975	Chrysemys_picta_bellii
ENSNBRG00000007276	-	51	45.763	ENSCPBG00000026433	-	54	45.763	Chrysemys_picta_bellii
ENSNBRG00000007276	-	59	46.364	ENSCPBG00000013652	-	71	46.364	Chrysemys_picta_bellii
ENSNBRG00000007276	-	65	48.387	ENSCSAVG00000010960	-	99	49.580	Ciona_savignyi
ENSNBRG00000007276	-	59	45.312	ENSDNOG00000047495	-	99	45.312	Dasypus_novemcinctus
ENSNBRG00000007276	-	55	48.361	ENSEBUG00000011694	-	97	48.361	Eptatretus_burgeri
ENSNBRG00000007276	-	73	40.833	ENSEBUG00000011435	-	81	41.007	Eptatretus_burgeri
ENSNBRG00000007276	-	50	45.570	ENSEBUG00000015837	-	67	45.570	Eptatretus_burgeri
ENSNBRG00000007276	-	59	43.333	ENSEBUG00000008306	-	79	43.333	Eptatretus_burgeri
ENSNBRG00000007276	-	67	44.304	ENSEBUG00000012919	-	79	44.304	Eptatretus_burgeri
ENSNBRG00000007276	-	79	43.750	ENSEBUG00000005264	-	89	43.750	Eptatretus_burgeri
ENSNBRG00000007276	-	63	38.261	ENSEBUG00000014717	-	78	38.261	Eptatretus_burgeri
ENSNBRG00000007276	-	54	46.667	ENSEBUG00000002075	-	77	44.248	Eptatretus_burgeri
ENSNBRG00000007276	-	52	47.407	ENSEASG00005004469	-	70	47.407	Equus_asinus_asinus
ENSNBRG00000007276	-	54	44.186	ENSGALG00000049609	-	56	44.186	Gallus_gallus
ENSNBRG00000007276	-	71	42.149	ENSGALG00000053507	-	83	42.149	Gallus_gallus
ENSNBRG00000007276	-	63	43.373	ENSGACG00000006283	-	57	43.373	Gasterosteus_aculeatus
ENSNBRG00000007276	-	59	42.735	ENSGAGG00000011399	-	85	44.737	Gopherus_agassizii
ENSNBRG00000007276	-	90	47.107	ENSGAGG00000011366	-	98	47.107	Gopherus_agassizii
ENSNBRG00000007276	-	78	39.695	ENSGAGG00000018885	-	77	39.695	Gopherus_agassizii
ENSNBRG00000007276	-	65	42.857	ENSHCOG00000018201	-	95	42.857	Hippocampus_comes
ENSNBRG00000007276	-	59	43.511	ENSIPUG00000015468	-	77	44.882	Ictalurus_punctatus
ENSNBRG00000007276	-	54	46.392	ENSIPUG00000021515	-	85	46.392	Ictalurus_punctatus
ENSNBRG00000007276	-	50	39.850	ENSJJAG00000023633	Zfp672	88	39.850	Jaculus_jaculus
ENSNBRG00000007276	-	67	41.026	ENSLACG00000005264	-	95	41.026	Latimeria_chalumnae
ENSNBRG00000007276	-	65	42.529	ENSLACG00000022211	-	85	42.529	Latimeria_chalumnae
ENSNBRG00000007276	-	57	46.774	ENSLOCG00000017864	-	99	42.991	Lepisosteus_oculatus
ENSNBRG00000007276	-	50	43.704	ENSMGAG00000013362	-	99	43.704	Meleagris_gallopavo
ENSNBRG00000007276	-	53	41.353	ENSMAUG00000009945	Zfp672	93	41.353	Mesocricetus_auratus
ENSNBRG00000007276	-	56	36.486	ENSMMOG00000003923	-	95	36.486	Mola_mola
ENSNBRG00000007276	-	68	44.167	ENSMODG00000010532	-	74	44.167	Monodelphis_domestica
ENSNBRG00000007276	-	63	42.742	ENSMODG00000001880	-	73	42.742	Monodelphis_domestica
ENSNBRG00000007276	-	53	42.857	MGP_CAROLIEiJ_G0016391	Zfp672	90	40.000	Mus_caroli
ENSNBRG00000007276	-	60	41.071	MGP_CAROLIEiJ_G0030502	-	61	41.071	Mus_caroli
ENSNBRG00000007276	-	51	42.857	ENSMUSG00000049755	Zfp672	90	40.000	Mus_musculus
ENSNBRG00000007276	-	60	40.336	MGP_SPRETEiJ_G0031613	-	83	40.336	Mus_spretus
ENSNBRG00000007276	-	62	42.857	MGP_SPRETEiJ_G0017233	Zfp672	90	38.750	Mus_spretus
ENSNBRG00000007276	-	50	41.379	ENSNGAG00000015777	Zim1	58	41.379	Nannospalax_galili
ENSNBRG00000007276	-	61	34.091	ENSORLG00020001922	-	83	41.463	Oryzias_latipes_hni
ENSNBRG00000007276	-	50	41.791	ENSPSIG00000015459	-	69	41.791	Pelodiscus_sinensis
ENSNBRG00000007276	-	78	44.330	ENSPSIG00000006586	-	99	44.330	Pelodiscus_sinensis
ENSNBRG00000007276	-	55	38.095	ENSPSIG00000005672	-	61	38.095	Pelodiscus_sinensis
ENSNBRG00000007276	-	56	44.628	ENSPSIG00000013021	-	74	44.628	Pelodiscus_sinensis
ENSNBRG00000007276	-	53	49.593	ENSPSIG00000016380	-	71	49.593	Pelodiscus_sinensis
ENSNBRG00000007276	-	51	42.202	ENSPSIG00000004502	-	54	42.202	Pelodiscus_sinensis
ENSNBRG00000007276	-	62	43.791	ENSPSIG00000003152	-	78	43.791	Pelodiscus_sinensis
ENSNBRG00000007276	-	70	47.619	ENSPSIG00000012650	-	72	47.619	Pelodiscus_sinensis
ENSNBRG00000007276	-	50	44.531	ENSPSIG00000010328	-	64	44.531	Pelodiscus_sinensis
ENSNBRG00000007276	-	56	42.553	ENSPSIG00000005603	-	73	42.553	Pelodiscus_sinensis
ENSNBRG00000007276	-	57	40.496	ENSPSIG00000010248	-	65	40.496	Pelodiscus_sinensis
ENSNBRG00000007276	-	62	39.416	ENSPREG00000002642	-	91	39.416	Poecilia_reticulata
ENSNBRG00000007276	-	67	80.465	ENSPNYG00000015486	-	85	80.465	Pundamilia_nyererei
ENSNBRG00000007276	-	64	45.455	ENSPNAG00000018395	-	82	45.455	Pygocentrus_nattereri
ENSNBRG00000007276	-	63	42.857	ENSRNOG00000002713	Zfp672	80	43.119	Rattus_norvegicus
ENSNBRG00000007276	-	58	39.823	ENSSHAG00000018106	-	74	39.823	Sarcophilus_harrisii
ENSNBRG00000007276	-	89	45.455	ENSSFOG00015019818	-	73	45.455	Scleropages_formosus
ENSNBRG00000007276	-	56	46.199	ENSSMAG00000004252	-	89	53.472	Scophthalmus_maximus
ENSNBRG00000007276	-	53	43.802	ENSSPUG00000010016	-	90	43.802	Sphenodon_punctatus
ENSNBRG00000007276	-	50	47.154	ENSSPUG00000004366	-	58	47.107	Sphenodon_punctatus
ENSNBRG00000007276	-	51	38.298	ENSSPAG00000021653	-	91	38.298	Stegastes_partitus
ENSNBRG00000007276	-	51	57.447	ENSTGUG00000015210	-	99	57.447	Taeniopygia_guttata
ENSNBRG00000007276	-	64	48.148	ENSTRUG00000022066	-	88	40.000	Takifugu_rubripes
ENSNBRG00000007276	-	59	44.800	ENSXETG00000031192	-	100	44.800	Xenopus_tropicalis
ENSNBRG00000007276	-	68	40.496	ENSXCOG00000006553	-	85	40.496	Xiphophorus_couchianus
ENSNBRG00000007276	-	62	38.889	ENSXMAG00000026680	-	73	38.889	Xiphophorus_maculatus