EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000007345 (Gene tree)
Gene ID: 102788086
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3706 bases
Position: chrJH422273.1:13380770-13384475
Accession: 102788086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000009444	Suf	PF05843.14	3.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000009711	-	1872	XM_006779992	ENSNBRP00000009444	623 (aa)	XP_006780055	-

Gene Model

Click here to download ENSNBRG00000007345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007345	cstf3	100	91.040	ENSG00000176102	CSTF3	87	91.040	Homo_sapiens
ENSNBRG00000007345	cstf3	100	98.395	ENSAPOG00000014054	cstf3	87	98.395	Acanthochromis_polyacanthus
ENSNBRG00000007345	cstf3	100	90.880	ENSAMEG00000007187	CSTF3	87	90.880	Ailuropoda_melanoleuca
ENSNBRG00000007345	cstf3	100	94.382	ENSACIG00000005539	cstf3	100	94.382	Amphilophus_citrinellus
ENSNBRG00000007345	cstf3	100	98.395	ENSAOCG00000010930	cstf3	87	98.395	Amphiprion_ocellaris
ENSNBRG00000007345	cstf3	100	98.395	ENSAPEG00000007903	cstf3	87	98.395	Amphiprion_percula
ENSNBRG00000007345	cstf3	100	98.876	ENSATEG00000000190	cstf3	87	98.876	Anabas_testudineus
ENSNBRG00000007345	cstf3	100	91.040	ENSAPLG00000007217	CSTF3	88	91.040	Anas_platyrhynchos
ENSNBRG00000007345	cstf3	100	91.360	ENSACAG00000002823	CSTF3	87	91.360	Anolis_carolinensis
ENSNBRG00000007345	cstf3	100	91.040	ENSANAG00000020699	CSTF3	100	91.040	Aotus_nancymaae
ENSNBRG00000007345	cstf3	100	100.000	ENSACLG00000007820	cstf3	88	100.000	Astatotilapia_calliptera
ENSNBRG00000007345	cstf3	100	94.231	ENSAMXG00000014198	cstf3	87	94.231	Astyanax_mexicanus
ENSNBRG00000007345	cstf3	100	91.040	ENSBTAG00000008617	CSTF3	93	91.040	Bos_taurus
ENSNBRG00000007345	cstf3	99	46.327	WBGene00006307	suf-1	89	46.327	Caenorhabditis_elegans
ENSNBRG00000007345	cstf3	100	91.040	ENSCJAG00000005533	CSTF3	100	91.040	Callithrix_jacchus
ENSNBRG00000007345	cstf3	100	91.040	ENSCAFG00000007264	CSTF3	87	91.040	Canis_familiaris
ENSNBRG00000007345	cstf3	100	91.040	ENSCAFG00020002715	CSTF3	89	91.040	Canis_lupus_dingo
ENSNBRG00000007345	cstf3	100	91.040	ENSCHIG00000016418	CSTF3	100	91.040	Capra_hircus
ENSNBRG00000007345	cstf3	100	91.360	ENSTSYG00000000451	CSTF3	100	91.360	Carlito_syrichta
ENSNBRG00000007345	cstf3	90	91.169	ENSCAPG00000010958	CSTF3	93	91.169	Cavia_aperea
ENSNBRG00000007345	cstf3	100	91.040	ENSCPOG00000005545	CSTF3	88	91.040	Cavia_porcellus
ENSNBRG00000007345	cstf3	100	91.040	ENSCCAG00000024790	CSTF3	100	91.040	Cebus_capucinus
ENSNBRG00000007345	cstf3	100	91.040	ENSCATG00000007080	CSTF3	100	91.040	Cercocebus_atys
ENSNBRG00000007345	cstf3	100	91.040	ENSCLAG00000016179	CSTF3	87	91.040	Chinchilla_lanigera
ENSNBRG00000007345	cstf3	76	97.814	ENSCHOG00000002497	CSTF3	67	97.814	Choloepus_hoffmanni
ENSNBRG00000007345	cstf3	100	91.360	ENSCPBG00000006753	CSTF3	87	91.360	Chrysemys_picta_bellii
ENSNBRG00000007345	cstf3	100	62.677	ENSCING00000006401	-	87	62.677	Ciona_intestinalis
ENSNBRG00000007345	cstf3	100	61.417	ENSCSAVG00000004851	-	89	61.417	Ciona_savignyi
ENSNBRG00000007345	cstf3	100	91.040	ENSCANG00000035468	CSTF3	100	91.040	Colobus_angolensis_palliatus
ENSNBRG00000007345	cstf3	100	90.720	ENSCGRG00001014773	Cstf3	87	90.720	Cricetulus_griseus_chok1gshd
ENSNBRG00000007345	cstf3	100	90.720	ENSCGRG00000004142	Cstf3	87	90.720	Cricetulus_griseus_crigri
ENSNBRG00000007345	cstf3	100	97.111	ENSCSEG00000014283	cstf3	87	97.111	Cynoglossus_semilaevis
ENSNBRG00000007345	cstf3	100	96.790	ENSCVAG00000019739	cstf3	87	96.790	Cyprinodon_variegatus
ENSNBRG00000007345	cstf3	100	94.712	ENSDARG00000018904	cstf3	87	94.712	Danio_rerio
ENSNBRG00000007345	cstf3	100	91.200	ENSDNOG00000007366	CSTF3	87	91.200	Dasypus_novemcinctus
ENSNBRG00000007345	cstf3	100	84.320	ENSDORG00000005898	Cstf3	87	84.320	Dipodomys_ordii
ENSNBRG00000007345	cstf3	99	57.011	FBgn0003559	su(f)	87	57.011	Drosophila_melanogaster
ENSNBRG00000007345	cstf3	96	90.301	ENSETEG00000017097	CSTF3	83	90.301	Echinops_telfairi
ENSNBRG00000007345	cstf3	86	75.791	ENSEBUG00000015459	cstf3	86	75.791	Eptatretus_burgeri
ENSNBRG00000007345	cstf3	100	91.040	ENSEASG00005019884	CSTF3	89	91.040	Equus_asinus_asinus
ENSNBRG00000007345	cstf3	100	91.040	ENSECAG00000023338	CSTF3	89	91.040	Equus_caballus
ENSNBRG00000007345	cstf3	100	85.280	ENSEEUG00000015167	CSTF3	87	85.280	Erinaceus_europaeus
ENSNBRG00000007345	cstf3	100	94.551	ENSELUG00000023393	cstf3	87	94.551	Esox_lucius
ENSNBRG00000007345	cstf3	100	91.200	ENSFCAG00000030711	CSTF3	87	91.200	Felis_catus
ENSNBRG00000007345	cstf3	100	91.200	ENSFALG00000010764	CSTF3	96	91.200	Ficedula_albicollis
ENSNBRG00000007345	cstf3	100	91.200	ENSFDAG00000012082	CSTF3	87	91.200	Fukomys_damarensis
ENSNBRG00000007345	cstf3	100	96.469	ENSFHEG00000020623	cstf3	87	96.469	Fundulus_heteroclitus
ENSNBRG00000007345	cstf3	100	94.240	ENSGMOG00000012275	cstf3	87	94.240	Gadus_morhua
ENSNBRG00000007345	cstf3	100	90.880	ENSGALG00000011685	CSTF3	87	90.880	Gallus_gallus
ENSNBRG00000007345	cstf3	100	96.790	ENSGAFG00000002181	cstf3	87	96.790	Gambusia_affinis
ENSNBRG00000007345	cstf3	100	96.950	ENSGACG00000015997	cstf3	87	96.950	Gasterosteus_aculeatus
ENSNBRG00000007345	cstf3	100	91.360	ENSGAGG00000006200	CSTF3	87	91.360	Gopherus_agassizii
ENSNBRG00000007345	cstf3	100	86.240	ENSGGOG00000026591	CSTF3	89	86.240	Gorilla_gorilla
ENSNBRG00000007345	cstf3	100	99.839	ENSHBUG00000016656	cstf3	88	99.839	Haplochromis_burtoni
ENSNBRG00000007345	cstf3	100	91.040	ENSHGLG00000017834	CSTF3	87	91.040	Heterocephalus_glaber_female
ENSNBRG00000007345	cstf3	100	91.040	ENSHGLG00100018042	CSTF3	88	91.040	Heterocephalus_glaber_male
ENSNBRG00000007345	cstf3	100	94.703	ENSHCOG00000015218	cstf3	88	94.703	Hippocampus_comes
ENSNBRG00000007345	cstf3	100	93.910	ENSIPUG00000013170	CSTF3	88	93.910	Ictalurus_punctatus
ENSNBRG00000007345	cstf3	100	91.040	ENSSTOG00000013306	CSTF3	87	91.040	Ictidomys_tridecemlineatus
ENSNBRG00000007345	cstf3	100	79.680	ENSJJAG00000018430	Cstf3	86	79.680	Jaculus_jaculus
ENSNBRG00000007345	cstf3	100	96.629	ENSKMAG00000010916	cstf3	87	96.629	Kryptolebias_marmoratus
ENSNBRG00000007345	cstf3	100	96.950	ENSLBEG00000002306	cstf3	87	96.950	Labrus_bergylta
ENSNBRG00000007345	cstf3	100	90.385	ENSLACG00000017296	CSTF3	87	90.385	Latimeria_chalumnae
ENSNBRG00000007345	cstf3	100	94.080	ENSLOCG00000004415	cstf3	87	94.080	Lepisosteus_oculatus
ENSNBRG00000007345	cstf3	100	91.040	ENSLAFG00000008712	CSTF3	87	91.040	Loxodonta_africana
ENSNBRG00000007345	cstf3	100	91.040	ENSMFAG00000029516	CSTF3	100	91.040	Macaca_fascicularis
ENSNBRG00000007345	cstf3	100	91.040	ENSMMUG00000002542	CSTF3	87	91.040	Macaca_mulatta
ENSNBRG00000007345	cstf3	100	91.040	ENSMNEG00000021807	CSTF3	100	91.040	Macaca_nemestrina
ENSNBRG00000007345	cstf3	100	91.040	ENSMLEG00000039594	CSTF3	100	91.040	Mandrillus_leucophaeus
ENSNBRG00000007345	cstf3	100	98.555	ENSMAMG00000020423	cstf3	88	98.555	Mastacembelus_armatus
ENSNBRG00000007345	cstf3	100	100.000	ENSMZEG00005012082	cstf3	89	100.000	Maylandia_zebra
ENSNBRG00000007345	cstf3	100	90.880	ENSMGAG00000001383	CSTF3	88	90.446	Meleagris_gallopavo
ENSNBRG00000007345	cstf3	100	90.560	ENSMAUG00000002487	Cstf3	87	90.560	Mesocricetus_auratus
ENSNBRG00000007345	cstf3	100	91.040	ENSMICG00000004784	CSTF3	100	91.040	Microcebus_murinus
ENSNBRG00000007345	cstf3	100	90.720	ENSMOCG00000017583	Cstf3	87	90.720	Microtus_ochrogaster
ENSNBRG00000007345	cstf3	100	97.592	ENSMMOG00000016026	cstf3	83	97.592	Mola_mola
ENSNBRG00000007345	cstf3	100	91.200	ENSMODG00000009745	-	87	91.200	Monodelphis_domestica
ENSNBRG00000007345	cstf3	100	80.800	ENSMODG00000025205	-	87	80.800	Monodelphis_domestica
ENSNBRG00000007345	cstf3	100	98.074	ENSMALG00000012050	cstf3	87	98.074	Monopterus_albus
ENSNBRG00000007345	cstf3	100	90.720	MGP_CAROLIEiJ_G0024026	Cstf3	87	90.720	Mus_caroli
ENSNBRG00000007345	cstf3	100	90.720	ENSMUSG00000027176	Cstf3	87	90.720	Mus_musculus
ENSNBRG00000007345	cstf3	100	90.720	MGP_PahariEiJ_G0025464	Cstf3	87	90.720	Mus_pahari
ENSNBRG00000007345	cstf3	100	90.720	MGP_SPRETEiJ_G0024939	Cstf3	87	90.720	Mus_spretus
ENSNBRG00000007345	cstf3	100	90.880	ENSMPUG00000011457	CSTF3	87	90.880	Mustela_putorius_furo
ENSNBRG00000007345	cstf3	100	91.040	ENSMLUG00000003073	-	87	91.040	Myotis_lucifugus
ENSNBRG00000007345	cstf3	100	88.480	ENSMLUG00000026022	-	87	88.480	Myotis_lucifugus
ENSNBRG00000007345	cstf3	100	90.880	ENSNGAG00000010677	Cstf3	88	90.880	Nannospalax_galili
ENSNBRG00000007345	cstf3	100	91.040	ENSNLEG00000017901	CSTF3	100	91.040	Nomascus_leucogenys
ENSNBRG00000007345	cstf3	81	90.514	ENSMEUG00000005640	-	97	90.514	Notamacropus_eugenii
ENSNBRG00000007345	cstf3	65	83.972	ENSOPRG00000000199	-	57	83.972	Ochotona_princeps
ENSNBRG00000007345	cstf3	100	91.200	ENSODEG00000016737	-	89	91.200	Octodon_degus
ENSNBRG00000007345	cstf3	99	80.806	ENSODEG00000006311	-	95	80.806	Octodon_degus
ENSNBRG00000007345	cstf3	100	100.000	ENSONIG00000005563	cstf3	87	100.000	Oreochromis_niloticus
ENSNBRG00000007345	cstf3	100	90.590	ENSOANG00000015140	CSTF3	96	90.590	Ornithorhynchus_anatinus
ENSNBRG00000007345	cstf3	100	90.880	ENSOCUG00000015417	CSTF3	87	90.880	Oryctolagus_cuniculus
ENSNBRG00000007345	cstf3	100	96.629	ENSORLG00000009762	cstf3	87	96.629	Oryzias_latipes
ENSNBRG00000007345	cstf3	100	96.629	ENSORLG00020005540	cstf3	88	96.629	Oryzias_latipes_hni
ENSNBRG00000007345	cstf3	100	96.469	ENSORLG00015003551	cstf3	89	96.469	Oryzias_latipes_hsok
ENSNBRG00000007345	cstf3	100	97.271	ENSOMEG00000003848	cstf3	91	97.271	Oryzias_melastigma
ENSNBRG00000007345	cstf3	100	90.446	ENSOGAG00000010229	CSTF3	87	90.446	Otolemur_garnettii
ENSNBRG00000007345	cstf3	100	91.040	ENSOARG00000017271	CSTF3	96	91.040	Ovis_aries
ENSNBRG00000007345	cstf3	100	88.960	ENSPPAG00000027358	CSTF3	89	88.960	Pan_paniscus
ENSNBRG00000007345	cstf3	100	91.200	ENSPPRG00000016852	CSTF3	87	91.200	Panthera_pardus
ENSNBRG00000007345	cstf3	100	91.200	ENSPTIG00000008716	CSTF3	87	91.200	Panthera_tigris_altaica
ENSNBRG00000007345	cstf3	100	91.040	ENSPTRG00000003485	CSTF3	89	89.280	Pan_troglodytes
ENSNBRG00000007345	cstf3	100	91.040	ENSPANG00000013722	CSTF3	88	91.040	Papio_anubis
ENSNBRG00000007345	cstf3	100	93.750	ENSPKIG00000023648	cstf3	87	93.750	Paramormyrops_kingsleyae
ENSNBRG00000007345	cstf3	100	91.360	ENSPSIG00000009173	CSTF3	87	91.360	Pelodiscus_sinensis
ENSNBRG00000007345	cstf3	73	98.901	ENSPMGG00000000164	cstf3	83	98.901	Periophthalmus_magnuspinnatus
ENSNBRG00000007345	cstf3	100	90.720	ENSPEMG00000011481	Cstf3	87	90.720	Peromyscus_maniculatus_bairdii
ENSNBRG00000007345	cstf3	100	80.064	ENSPMAG00000007282	cstf3	87	80.255	Petromyzon_marinus
ENSNBRG00000007345	cstf3	100	76.677	ENSPCIG00000030419	-	78	76.997	Phascolarctos_cinereus
ENSNBRG00000007345	cstf3	100	91.520	ENSPCIG00000026406	-	100	91.520	Phascolarctos_cinereus
ENSNBRG00000007345	cstf3	100	96.950	ENSPFOG00000017239	cstf3	87	96.950	Poecilia_formosa
ENSNBRG00000007345	cstf3	100	97.111	ENSPLAG00000009456	cstf3	87	97.111	Poecilia_latipinna
ENSNBRG00000007345	cstf3	100	96.950	ENSPMEG00000010320	cstf3	87	96.950	Poecilia_mexicana
ENSNBRG00000007345	cstf3	100	96.950	ENSPREG00000013549	cstf3	88	96.950	Poecilia_reticulata
ENSNBRG00000007345	cstf3	100	91.040	ENSPPYG00000003375	CSTF3	87	91.040	Pongo_abelii
ENSNBRG00000007345	cstf3	66	100.000	ENSPCAG00000008025	-	58	100.000	Procavia_capensis
ENSNBRG00000007345	cstf3	100	87.040	ENSPCOG00000014417	CSTF3	88	87.040	Propithecus_coquereli
ENSNBRG00000007345	cstf3	100	87.040	ENSPVAG00000002350	CSTF3	87	87.040	Pteropus_vampyrus
ENSNBRG00000007345	cstf3	100	99.839	ENSPNYG00000018259	cstf3	89	99.839	Pundamilia_nyererei
ENSNBRG00000007345	cstf3	100	95.032	ENSPNAG00000020182	cstf3	100	87.340	Pygocentrus_nattereri
ENSNBRG00000007345	cstf3	100	90.400	ENSRNOG00000012089	Cstf3	100	90.400	Rattus_norvegicus
ENSNBRG00000007345	cstf3	100	91.040	ENSRBIG00000044258	CSTF3	100	91.040	Rhinopithecus_bieti
ENSNBRG00000007345	cstf3	100	91.040	ENSRROG00000043450	CSTF3	100	91.040	Rhinopithecus_roxellana
ENSNBRG00000007345	cstf3	100	91.040	ENSSBOG00000024764	CSTF3	100	91.040	Saimiri_boliviensis_boliviensis
ENSNBRG00000007345	cstf3	100	81.600	ENSSHAG00000003135	-	86	81.600	Sarcophilus_harrisii
ENSNBRG00000007345	cstf3	100	91.200	ENSSHAG00000018128	-	87	91.200	Sarcophilus_harrisii
ENSNBRG00000007345	cstf3	100	94.071	ENSSFOG00015022133	cstf3	87	94.071	Scleropages_formosus
ENSNBRG00000007345	cstf3	100	97.592	ENSSMAG00000002197	cstf3	87	97.592	Scophthalmus_maximus
ENSNBRG00000007345	cstf3	100	98.876	ENSSDUG00000020426	cstf3	87	98.876	Seriola_dumerili
ENSNBRG00000007345	cstf3	100	98.716	ENSSLDG00000025649	cstf3	91	98.716	Seriola_lalandi_dorsalis
ENSNBRG00000007345	cstf3	100	90.720	ENSSARG00000000391	CSTF3	87	90.720	Sorex_araneus
ENSNBRG00000007345	cstf3	100	90.720	ENSSPUG00000010546	CSTF3	90	90.720	Sphenodon_punctatus
ENSNBRG00000007345	cstf3	100	98.234	ENSSPAG00000004958	cstf3	87	98.234	Stegastes_partitus
ENSNBRG00000007345	cstf3	100	90.880	ENSSSCG00000040954	CSTF3	87	90.880	Sus_scrofa
ENSNBRG00000007345	cstf3	100	91.200	ENSTGUG00000005010	CSTF3	88	91.200	Taeniopygia_guttata
ENSNBRG00000007345	cstf3	100	95.666	ENSTRUG00000004959	cstf3	90	93.098	Takifugu_rubripes
ENSNBRG00000007345	cstf3	100	96.790	ENSTNIG00000013811	cstf3	87	96.790	Tetraodon_nigroviridis
ENSNBRG00000007345	cstf3	100	88.160	ENSTBEG00000001544	CSTF3	88	88.160	Tupaia_belangeri
ENSNBRG00000007345	cstf3	100	87.840	ENSTTRG00000016366	CSTF3	87	87.840	Tursiops_truncatus
ENSNBRG00000007345	cstf3	100	90.720	ENSUMAG00000018971	CSTF3	100	90.720	Ursus_maritimus
ENSNBRG00000007345	cstf3	100	90.880	ENSVPAG00000007800	CSTF3	87	90.880	Vicugna_pacos
ENSNBRG00000007345	cstf3	100	91.040	ENSVVUG00000014938	CSTF3	100	91.040	Vulpes_vulpes
ENSNBRG00000007345	cstf3	97	76.911	ENSXETG00000021399	cstf3	99	76.923	Xenopus_tropicalis
ENSNBRG00000007345	cstf3	63	34.509	ENSXETG00000017946	-	82	34.509	Xenopus_tropicalis
ENSNBRG00000007345	cstf3	100	96.469	ENSXCOG00000011741	cstf3	100	96.469	Xiphophorus_couchianus
ENSNBRG00000007345	cstf3	100	96.950	ENSXMAG00000009545	cstf3	87	96.950	Xiphophorus_maculatus