EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000007602 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6836 bases
Position: chrJH422393.1:1106958-1113793
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	1	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	2	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	3	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	4	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	5	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	6	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	7	8
ENSNBRP00000009743	zf-C2H2	PF00096.26	2.6e-40	8	8
ENSNBRP00000009743	zf-met	PF12874.7	8.8e-19	1	2
ENSNBRP00000009743	zf-met	PF12874.7	8.8e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010012	-	963	-	ENSNBRP00000009743	320 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000007602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000007602	-	93	45.312	ENSNBRG00000000305	-	82	45.312
ENSNBRG00000007602	-	82	44.172	ENSNBRG00000012391	gfi1b	53	39.779
ENSNBRG00000007602	-	86	34.932	ENSNBRG00000014403	-	55	34.932
ENSNBRG00000007602	-	83	36.364	ENSNBRG00000004976	prdm5	76	35.018
ENSNBRG00000007602	-	96	41.667	ENSNBRG00000008106	-	93	41.339
ENSNBRG00000007602	-	87	46.000	ENSNBRG00000019481	-	92	47.266
ENSNBRG00000007602	-	80	48.472	ENSNBRG00000000523	-	66	48.472
ENSNBRG00000007602	-	90	42.697	ENSNBRG00000024344	-	78	43.548
ENSNBRG00000007602	-	77	45.652	ENSNBRG00000010351	-	89	45.652
ENSNBRG00000007602	-	85	44.444	ENSNBRG00000024066	-	86	44.444
ENSNBRG00000007602	-	98	32.302	ENSNBRG00000010987	-	77	50.000
ENSNBRG00000007602	-	88	45.415	ENSNBRG00000016169	-	66	45.415
ENSNBRG00000007602	-	79	34.459	ENSNBRG00000013983	scrt1b	51	34.459
ENSNBRG00000007602	-	88	42.282	ENSNBRG00000015442	ZNF319	89	42.282
ENSNBRG00000007602	-	83	46.821	ENSNBRG00000007384	-	63	46.821
ENSNBRG00000007602	-	81	36.885	ENSNBRG00000016564	-	81	36.885
ENSNBRG00000007602	-	88	44.000	ENSNBRG00000021998	-	64	44.000
ENSNBRG00000007602	-	82	43.541	ENSNBRG00000005796	-	92	43.541
ENSNBRG00000007602	-	85	40.854	ENSNBRG00000002946	-	55	38.290
ENSNBRG00000007602	-	82	44.545	ENSNBRG00000001834	-	100	44.545
ENSNBRG00000007602	-	80	48.438	ENSNBRG00000004822	-	51	48.438
ENSNBRG00000007602	-	81	46.800	ENSNBRG00000015652	-	83	46.800
ENSNBRG00000007602	-	88	41.935	ENSNBRG00000016550	-	88	41.935
ENSNBRG00000007602	-	87	36.797	ENSNBRG00000009279	-	90	36.797
ENSNBRG00000007602	-	83	44.670	ENSNBRG00000023960	-	67	44.670
ENSNBRG00000007602	-	87	42.056	ENSNBRG00000007276	-	58	42.056
ENSNBRG00000007602	-	82	43.056	ENSNBRG00000004557	-	88	43.056
ENSNBRG00000007602	-	82	39.474	ENSNBRG00000008827	znf319b	89	39.474
ENSNBRG00000007602	-	87	36.090	ENSNBRG00000020314	si:dkey-89b17.4	72	36.090
ENSNBRG00000007602	-	81	43.262	ENSNBRG00000004723	-	93	43.262
ENSNBRG00000007602	-	80	50.000	ENSNBRG00000000793	-	100	50.000
ENSNBRG00000007602	-	83	49.425	ENSNBRG00000003000	-	73	49.425
ENSNBRG00000007602	-	93	34.722	ENSNBRG00000022534	znf646	76	34.722
ENSNBRG00000007602	-	81	48.333	ENSNBRG00000015873	-	98	46.269
ENSNBRG00000007602	-	88	44.589	ENSNBRG00000006411	-	93	44.589
ENSNBRG00000007602	-	88	38.961	ENSNBRG00000005175	zbtb41	62	38.961
ENSNBRG00000007602	-	80	46.552	ENSNBRG00000004792	-	52	46.552
ENSNBRG00000007602	-	80	47.598	ENSNBRG00000016219	-	85	47.598
ENSNBRG00000007602	-	90	32.867	ENSNBRG00000007221	scrt2	61	32.867
ENSNBRG00000007602	-	78	48.454	ENSNBRG00000024046	-	56	48.454
ENSNBRG00000007602	-	81	46.154	ENSNBRG00000019004	-	62	46.154
ENSNBRG00000007602	-	80	50.403	ENSNBRG00000024019	-	86	50.403
ENSNBRG00000007602	-	86	46.552	ENSNBRG00000005849	-	86	46.552
ENSNBRG00000007602	-	86	48.148	ENSNBRG00000007311	-	81	48.148
ENSNBRG00000007602	-	86	42.857	ENSNBRG00000001608	-	94	42.857
ENSNBRG00000007602	-	83	46.400	ENSNBRG00000024354	-	97	46.400
ENSNBRG00000007602	-	93	48.855	ENSNBRG00000016282	-	93	48.855
ENSNBRG00000007602	-	80	47.788	ENSNBRG00000024345	-	88	47.788
ENSNBRG00000007602	-	90	44.828	ENSNBRG00000021237	-	91	44.828
ENSNBRG00000007602	-	78	48.416	ENSNBRG00000024014	-	71	48.416
ENSNBRG00000007602	-	81	45.455	ENSNBRG00000002542	-	85	45.455
ENSNBRG00000007602	-	73	56.164	ENSNBRG00000010405	-	82	56.164
ENSNBRG00000007602	-	85	50.568	ENSNBRG00000023229	-	80	50.568
ENSNBRG00000007602	-	83	46.729	ENSNBRG00000008223	-	89	39.024
ENSNBRG00000007602	-	86	41.121	ENSNBRG00000016603	-	96	41.121
ENSNBRG00000007602	-	81	35.503	ENSNBRG00000016032	patz1	50	35.503
ENSNBRG00000007602	-	85	45.408	ENSNBRG00000024179	-	67	46.341
ENSNBRG00000007602	-	82	45.852	ENSNBRG00000016234	-	66	45.852
ENSNBRG00000007602	-	78	48.795	ENSNBRG00000023956	-	54	48.795
ENSNBRG00000007602	-	85	48.966	ENSNBRG00000024086	-	64	48.966
ENSNBRG00000007602	-	83	45.868	ENSNBRG00000000708	-	89	45.868
ENSNBRG00000007602	-	95	46.835	ENSNBRG00000009075	znf236	82	43.956
ENSNBRG00000007602	-	87	46.154	ENSNBRG00000024020	-	58	46.154
ENSNBRG00000007602	-	91	46.484	ENSNBRG00000002902	-	98	46.484
ENSNBRG00000007602	-	80	47.552	ENSNBRG00000001761	-	50	47.552
ENSNBRG00000007602	-	93	50.323	ENSNBRG00000003124	-	97	50.323
ENSNBRG00000007602	-	89	48.851	ENSNBRG00000000492	-	68	48.851
ENSNBRG00000007602	-	88	44.068	ENSNBRG00000016639	-	53	44.068
ENSNBRG00000007602	-	81	46.199	ENSNBRG00000013583	-	91	46.199
ENSNBRG00000007602	-	82	47.005	ENSNBRG00000000321	-	99	43.071
ENSNBRG00000007602	-	90	43.646	ENSNBRG00000022241	-	94	43.646
ENSNBRG00000007602	-	94	42.520	ENSNBRG00000004523	-	93	42.520
ENSNBRG00000007602	-	88	43.750	ENSNBRG00000016577	si:dkey-182i3.9	95	42.718
ENSNBRG00000007602	-	81	46.957	ENSNBRG00000020159	znf526	53	46.957
ENSNBRG00000007602	-	86	45.198	ENSNBRG00000008123	-	81	45.198
ENSNBRG00000007602	-	94	41.993	ENSNBRG00000016666	-	96	45.894
ENSNBRG00000007602	-	78	39.815	ENSNBRG00000012376	-	98	39.815
ENSNBRG00000007602	-	80	44.898	ENSNBRG00000021355	-	88	44.898
ENSNBRG00000007602	-	79	48.696	ENSNBRG00000004381	-	76	48.696
ENSNBRG00000007602	-	79	40.952	ENSNBRG00000011785	snai2	55	40.952
ENSNBRG00000007602	-	85	41.569	ENSNBRG00000005823	-	84	41.569
ENSNBRG00000007602	-	83	49.801	ENSNBRG00000001163	-	98	49.004
ENSNBRG00000007602	-	78	38.660	ENSNBRG00000018718	zbtb47b	68	38.660
ENSNBRG00000007602	-	79	45.139	ENSNBRG00000003250	-	89	42.152
ENSNBRG00000007602	-	92	47.619	ENSNBRG00000014088	-	99	48.428
ENSNBRG00000007602	-	80	43.939	ENSNBRG00000016582	-	84	43.939
ENSNBRG00000007602	-	84	44.595	ENSNBRG00000024048	-	86	44.595
ENSNBRG00000007602	-	91	39.175	ENSNBRG00000019770	-	91	48.624
ENSNBRG00000007602	-	87	42.085	ENSNBRG00000005805	-	94	42.085
ENSNBRG00000007602	-	81	44.068	ENSNBRG00000006757	-	71	41.667
ENSNBRG00000007602	-	84	41.714	ENSNBRG00000001641	-	69	45.890
ENSNBRG00000007602	-	81	44.094	ENSNBRG00000024294	-	62	44.094
ENSNBRG00000007602	-	79	40.609	ENSNBRG00000024293	-	88	41.107
ENSNBRG00000007602	-	88	36.630	ENSNBRG00000009128	-	54	39.683
ENSNBRG00000007602	-	86	49.286	ENSNBRG00000013501	-	78	49.286
ENSNBRG00000007602	-	80	45.217	ENSNBRG00000000577	-	77	46.371
ENSNBRG00000007602	-	81	55.245	ENSNBRG00000000960	-	99	47.872
ENSNBRG00000007602	-	80	50.435	ENSNBRG00000006125	-	93	50.435
ENSNBRG00000007602	-	78	47.093	ENSNBRG00000013604	-	69	47.093
ENSNBRG00000007602	-	86	38.397	ENSNBRG00000021967	-	67	38.397
ENSNBRG00000007602	-	80	47.982	ENSNBRG00000024054	-	58	47.982
ENSNBRG00000007602	-	77	46.012	ENSNBRG00000010194	-	66	44.643
ENSNBRG00000007602	-	97	44.792	ENSNBRG00000009811	-	88	44.792
ENSNBRG00000007602	-	91	41.797	ENSNBRG00000009815	-	92	41.797

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007602	-	98	89.552	ENSAPOG00000002213	-	78	89.552	Acanthochromis_polyacanthus
ENSNBRG00000007602	-	86	56.738	ENSACIG00000013163	-	87	56.738	Amphilophus_citrinellus
ENSNBRG00000007602	-	88	42.328	ENSACIG00000013149	-	83	43.200	Amphilophus_citrinellus
ENSNBRG00000007602	-	98	89.552	ENSAOCG00000013124	-	70	89.552	Amphiprion_ocellaris
ENSNBRG00000007602	-	98	89.552	ENSAPEG00000009997	-	94	89.552	Amphiprion_percula
ENSNBRG00000007602	-	98	87.981	ENSATEG00000004127	-	98	70.893	Anabas_testudineus
ENSNBRG00000007602	-	98	83.830	ENSACLG00000005708	-	76	83.830	Astatotilapia_calliptera
ENSNBRG00000007602	-	92	75.598	ENSCVAG00000014734	-	98	53.169	Cyprinodon_variegatus
ENSNBRG00000007602	-	99	82.738	ENSFHEG00000014060	-	89	82.738	Fundulus_heteroclitus
ENSNBRG00000007602	-	83	47.701	ENSGMOG00000017526	-	97	58.276	Gadus_morhua
ENSNBRG00000007602	-	98	83.582	ENSGAFG00000011174	-	74	83.582	Gambusia_affinis
ENSNBRG00000007602	-	89	64.754	ENSGACG00000019550	-	86	64.754	Gasterosteus_aculeatus
ENSNBRG00000007602	-	98	83.830	ENSHBUG00000006662	-	76	83.830	Haplochromis_burtoni
ENSNBRG00000007602	-	87	68.664	ENSHCOG00000003041	-	96	61.232	Hippocampus_comes
ENSNBRG00000007602	-	98	76.596	ENSKMAG00000009979	-	80	76.596	Kryptolebias_marmoratus
ENSNBRG00000007602	-	99	87.562	ENSLBEG00000010165	-	81	87.562	Labrus_bergylta
ENSNBRG00000007602	-	85	74.359	ENSMAMG00000006312	-	90	74.359	Mastacembelus_armatus
ENSNBRG00000007602	-	98	83.830	ENSMZEG00005013913	-	76	83.830	Maylandia_zebra
ENSNBRG00000007602	-	90	73.228	ENSMMOG00000011282	-	92	75.479	Mola_mola
ENSNBRG00000007602	-	98	90.050	ENSMALG00000000494	-	94	90.050	Monopterus_albus
ENSNBRG00000007602	-	85	69.288	ENSONIG00000003856	-	100	73.575	Oreochromis_niloticus
ENSNBRG00000007602	-	98	82.266	ENSORLG00000010117	-	71	82.266	Oryzias_latipes
ENSNBRG00000007602	-	98	82.266	ENSORLG00020000219	-	76	82.266	Oryzias_latipes_hni
ENSNBRG00000007602	-	98	82.266	ENSORLG00015000258	-	99	81.356	Oryzias_latipes_hsok
ENSNBRG00000007602	-	98	73.504	ENSOMEG00000018262	-	85	71.366	Oryzias_melastigma
ENSNBRG00000007602	-	91	66.514	ENSPFOG00000013455	-	100	66.514	Poecilia_formosa
ENSNBRG00000007602	-	89	88.406	ENSPLAG00000004027	-	65	88.406	Poecilia_latipinna
ENSNBRG00000007602	-	98	83.582	ENSPMEG00000007589	-	72	83.582	Poecilia_mexicana
ENSNBRG00000007602	-	87	74.490	ENSPREG00000000153	-	93	74.490	Poecilia_reticulata
ENSNBRG00000007602	-	93	83.830	ENSPNYG00000007814	-	93	72.222	Pundamilia_nyererei
ENSNBRG00000007602	-	90	41.825	ENSPNYG00000007781	-	96	41.825	Pundamilia_nyererei
ENSNBRG00000007602	-	97	86.567	ENSSMAG00000021251	-	99	77.032	Scophthalmus_maximus
ENSNBRG00000007602	-	97	90.452	ENSSDUG00000013904	-	70	90.452	Seriola_dumerili
ENSNBRG00000007602	-	97	90.452	ENSSLDG00000006994	-	97	64.151	Seriola_lalandi_dorsalis
ENSNBRG00000007602	-	98	77.778	ENSSPAG00000011524	-	94	77.778	Stegastes_partitus
ENSNBRG00000007602	-	99	70.820	ENSTRUG00000015687	-	98	74.737	Takifugu_rubripes
ENSNBRG00000007602	-	85	73.016	ENSTNIG00000008242	-	100	73.016	Tetraodon_nigroviridis
ENSNBRG00000007602	-	87	59.333	ENSXCOG00000015947	-	99	59.667	Xiphophorus_couchianus
ENSNBRG00000007602	-	98	83.582	ENSXMAG00000023291	-	99	66.774	Xiphophorus_maculatus