EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000007663 (Gene tree)
Gene ID: 102794570
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7775 bases
Position: chrJH422276.1:4785642-4793416
Accession: 102794570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000009980	YTH	PF04146.15	2.1e-41	1	1
ENSNBRP00000010035	YTH	PF04146.15	4.4e-41	1	1
ENSNBRP00000010008	YTH	PF04146.15	1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010314	-	1467	-	ENSNBRP00000010035	488 (aa)	-	-
ENSNBRT00000010285	-	1374	-	ENSNBRP00000010008	457 (aa)	-	-
ENSNBRT00000010257	-	1635	XM_006782694	ENSNBRP00000009980	544 (aa)	XP_006782757	-

Gene Model

Click here to download ENSNBRG00000007663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007663	ythdc1	70	66.589	ENSG00000083896	YTHDC1	59	63.665	Homo_sapiens
ENSNBRG00000007663	ythdc1	89	80.000	ENSAPOG00000013997	ythdc1	72	81.395	Acanthochromis_polyacanthus
ENSNBRG00000007663	ythdc1	70	66.355	ENSAMEG00000005688	YTHDC1	57	60.890	Ailuropoda_melanoleuca
ENSNBRG00000007663	ythdc1	92	80.075	ENSACIG00000019728	ythdc1	84	79.661	Amphilophus_citrinellus
ENSNBRG00000007663	ythdc1	87	84.964	ENSAOCG00000000239	ythdc1	73	90.511	Amphiprion_ocellaris
ENSNBRG00000007663	ythdc1	87	84.487	ENSAPEG00000000618	ythdc1	66	90.448	Amphiprion_percula
ENSNBRG00000007663	ythdc1	87	84.010	ENSATEG00000023007	ythdc1	68	88.988	Anabas_testudineus
ENSNBRG00000007663	ythdc1	70	66.745	ENSAPLG00000009921	YTHDC1	60	60.890	Anas_platyrhynchos
ENSNBRG00000007663	ythdc1	70	65.105	ENSACAG00000009697	YTHDC1	58	59.719	Anolis_carolinensis
ENSNBRG00000007663	ythdc1	70	66.589	ENSANAG00000001522	YTHDC1	60	63.889	Aotus_nancymaae
ENSNBRG00000007663	ythdc1	100	84.968	ENSACLG00000019371	ythdc1	73	100.000	Astatotilapia_calliptera
ENSNBRG00000007663	ythdc1	71	72.482	ENSAMXG00000006978	ythdc1	58	68.059	Astyanax_mexicanus
ENSNBRG00000007663	ythdc1	70	65.421	ENSBTAG00000015572	YTHDC1	57	60.187	Bos_taurus
ENSNBRG00000007663	ythdc1	70	66.589	ENSCJAG00000009934	YTHDC1	57	60.422	Callithrix_jacchus
ENSNBRG00000007663	ythdc1	70	66.355	ENSCAFG00000002821	YTHDC1	57	60.890	Canis_familiaris
ENSNBRG00000007663	ythdc1	70	66.355	ENSCAFG00020027112	YTHDC1	57	60.890	Canis_lupus_dingo
ENSNBRG00000007663	ythdc1	70	58.578	ENSCHIG00000004810	YTHDC1	58	58.940	Capra_hircus
ENSNBRG00000007663	ythdc1	70	66.589	ENSTSYG00000011668	YTHDC1	60	57.632	Carlito_syrichta
ENSNBRG00000007663	ythdc1	72	66.575	ENSCPOG00000010929	YTHDC1	53	62.466	Cavia_porcellus
ENSNBRG00000007663	ythdc1	70	66.589	ENSCCAG00000035754	YTHDC1	57	60.422	Cebus_capucinus
ENSNBRG00000007663	ythdc1	70	66.019	ENSCATG00000036320	YTHDC1	59	63.889	Cercocebus_atys
ENSNBRG00000007663	ythdc1	70	65.534	ENSCLAG00000005482	YTHDC1	60	64.087	Chinchilla_lanigera
ENSNBRG00000007663	ythdc1	70	66.589	ENSCSAG00000005252	YTHDC1	57	60.422	Chlorocebus_sabaeus
ENSNBRG00000007663	ythdc1	53	74.000	ENSCHOG00000006136	-	60	82.787	Choloepus_hoffmanni
ENSNBRG00000007663	ythdc1	70	71.500	ENSCPBG00000021965	YTHDC1	63	61.772	Chrysemys_picta_bellii
ENSNBRG00000007663	ythdc1	70	66.589	ENSCANG00000004769	YTHDC1	60	63.889	Colobus_angolensis_palliatus
ENSNBRG00000007663	ythdc1	70	65.777	ENSCGRG00001000816	Ythdc1	60	62.121	Cricetulus_griseus_chok1gshd
ENSNBRG00000007663	ythdc1	70	66.355	ENSCGRG00000009807	Ythdc1	57	60.187	Cricetulus_griseus_crigri
ENSNBRG00000007663	ythdc1	87	82.816	ENSCSEG00000020404	ythdc1	73	84.428	Cynoglossus_semilaevis
ENSNBRG00000007663	ythdc1	87	74.463	ENSCVAG00000022349	ythdc1	60	81.553	Cyprinodon_variegatus
ENSNBRG00000007663	ythdc1	92	58.179	ENSDARG00000051953	ythdc1	58	66.093	Danio_rerio
ENSNBRG00000007663	ythdc1	73	64.334	ENSDNOG00000004949	YTHDC1	57	60.422	Dasypus_novemcinctus
ENSNBRG00000007663	ythdc1	70	66.589	ENSDORG00000013045	Ythdc1	60	63.889	Dipodomys_ordii
ENSNBRG00000007663	ythdc1	70	66.355	ENSEASG00005018383	YTHDC1	61	60.890	Equus_asinus_asinus
ENSNBRG00000007663	ythdc1	67	69.509	ENSECAG00000018303	YTHDC1	61	60.890	Equus_caballus
ENSNBRG00000007663	ythdc1	70	65.349	ENSEEUG00000015466	YTHDC1	57	59.485	Erinaceus_europaeus
ENSNBRG00000007663	ythdc1	71	67.943	ENSELUG00000014029	ythdc1	57	64.115	Esox_lucius
ENSNBRG00000007663	ythdc1	70	66.355	ENSFCAG00000026791	YTHDC1	57	60.890	Felis_catus
ENSNBRG00000007663	ythdc1	78	62.838	ENSFALG00000006581	YTHDC1	69	66.852	Ficedula_albicollis
ENSNBRG00000007663	ythdc1	70	66.355	ENSFDAG00000018560	YTHDC1	58	60.422	Fukomys_damarensis
ENSNBRG00000007663	ythdc1	69	73.355	ENSFHEG00000001286	ythdc1	59	75.166	Fundulus_heteroclitus
ENSNBRG00000007663	ythdc1	74	65.205	ENSGMOG00000018815	ythdc1	85	56.751	Gadus_morhua
ENSNBRG00000007663	ythdc1	70	66.511	ENSGALG00000035906	YTHDC1	56	60.185	Gallus_gallus
ENSNBRG00000007663	ythdc1	67	75.510	ENSGAFG00000001759	ythdc1	82	70.984	Gambusia_affinis
ENSNBRG00000007663	ythdc1	87	77.859	ENSGACG00000015486	ythdc1	71	77.295	Gasterosteus_aculeatus
ENSNBRG00000007663	ythdc1	70	71.750	ENSGAGG00000007108	YTHDC1	61	65.528	Gopherus_agassizii
ENSNBRG00000007663	ythdc1	70	66.019	ENSGGOG00000021958	YTHDC1	60	63.889	Gorilla_gorilla
ENSNBRG00000007663	ythdc1	100	85.138	ENSHBUG00000019288	ythdc1	73	100.000	Haplochromis_burtoni
ENSNBRG00000007663	ythdc1	70	65.777	ENSHGLG00000006319	-	60	62.997	Heterocephalus_glaber_female
ENSNBRG00000007663	ythdc1	70	65.046	ENSHGLG00100001556	-	61	61.468	Heterocephalus_glaber_male
ENSNBRG00000007663	ythdc1	67	82.283	ENSHCOG00000001520	ythdc1	66	76.232	Hippocampus_comes
ENSNBRG00000007663	ythdc1	91	58.462	ENSIPUG00000018136	ythdc1	58	66.420	Ictalurus_punctatus
ENSNBRG00000007663	ythdc1	70	65.367	ENSSTOG00000013652	YTHDC1	59	65.924	Ictidomys_tridecemlineatus
ENSNBRG00000007663	ythdc1	70	65.534	ENSJJAG00000010268	Ythdc1	62	62.349	Jaculus_jaculus
ENSNBRG00000007663	ythdc1	71	84.428	ENSKMAG00000006483	ythdc1	87	87.470	Kryptolebias_marmoratus
ENSNBRG00000007663	ythdc1	91	72.257	ENSLBEG00000020831	ythdc1	80	70.455	Labrus_bergylta
ENSNBRG00000007663	ythdc1	70	63.825	ENSLACG00000004893	YTHDC1	61	60.092	Latimeria_chalumnae
ENSNBRG00000007663	ythdc1	92	57.216	ENSLOCG00000003045	ythdc1	52	68.994	Lepisosteus_oculatus
ENSNBRG00000007663	ythdc1	70	64.840	ENSLAFG00000021592	YTHDC1	65	64.543	Loxodonta_africana
ENSNBRG00000007663	ythdc1	70	66.019	ENSMFAG00000031927	YTHDC1	60	63.889	Macaca_fascicularis
ENSNBRG00000007663	ythdc1	70	66.589	ENSMMUG00000002265	YTHDC1	60	63.889	Macaca_mulatta
ENSNBRG00000007663	ythdc1	70	66.589	ENSMNEG00000033751	YTHDC1	60	63.889	Macaca_nemestrina
ENSNBRG00000007663	ythdc1	70	66.589	ENSMLEG00000042147	YTHDC1	60	63.889	Mandrillus_leucophaeus
ENSNBRG00000007663	ythdc1	87	80.806	ENSMAMG00000013122	ythdc1	72	88.378	Mastacembelus_armatus
ENSNBRG00000007663	ythdc1	100	84.968	ENSMZEG00005023173	ythdc1	73	100.000	Maylandia_zebra
ENSNBRG00000007663	ythdc1	70	66.511	ENSMGAG00000010391	YTHDC1	59	60.422	Meleagris_gallopavo
ENSNBRG00000007663	ythdc1	70	65.777	ENSMAUG00000001286	Ythdc1	60	62.121	Mesocricetus_auratus
ENSNBRG00000007663	ythdc1	73	65.688	ENSMICG00000034640	YTHDC1	60	63.222	Microcebus_murinus
ENSNBRG00000007663	ythdc1	70	65.777	ENSMOCG00000020201	Ythdc1	61	62.310	Microtus_ochrogaster
ENSNBRG00000007663	ythdc1	91	82.505	ENSMMOG00000021200	ythdc1	85	68.301	Mola_mola
ENSNBRG00000007663	ythdc1	79	45.336	ENSMODG00000009173	-	74	48.986	Monodelphis_domestica
ENSNBRG00000007663	ythdc1	80	45.868	ENSMODG00000010076	-	50	49.275	Monodelphis_domestica
ENSNBRG00000007663	ythdc1	59	49.394	ENSMODG00000004117	-	93	47.452	Monodelphis_domestica
ENSNBRG00000007663	ythdc1	70	66.355	ENSMODG00000020754	-	59	60.890	Monodelphis_domestica
ENSNBRG00000007663	ythdc1	87	82.381	ENSMALG00000013412	ythdc1	70	89.286	Monopterus_albus
ENSNBRG00000007663	ythdc1	70	66.355	MGP_CAROLIEiJ_G0027347	Ythdc1	60	62.424	Mus_caroli
ENSNBRG00000007663	ythdc1	73	65.011	ENSMUSG00000035851	Ythdc1	60	61.631	Mus_musculus
ENSNBRG00000007663	ythdc1	73	65.011	MGP_PahariEiJ_G0017126	Ythdc1	60	61.934	Mus_pahari
ENSNBRG00000007663	ythdc1	73	65.011	MGP_SPRETEiJ_G0028339	Ythdc1	60	61.631	Mus_spretus
ENSNBRG00000007663	ythdc1	82	67.053	ENSMPUG00000001743	YTHDC1	57	65.891	Mustela_putorius_furo
ENSNBRG00000007663	ythdc1	70	66.121	ENSMLUG00000016300	YTHDC1	58	60.656	Myotis_lucifugus
ENSNBRG00000007663	ythdc1	70	64.450	ENSNLEG00000009202	YTHDC1	60	61.774	Nomascus_leucogenys
ENSNBRG00000007663	ythdc1	70	65.888	ENSODEG00000001715	YTHDC1	57	60.187	Octodon_degus
ENSNBRG00000007663	ythdc1	100	85.505	ENSONIG00000012651	ythdc1	73	100.000	Oreochromis_niloticus
ENSNBRG00000007663	ythdc1	67	68.101	ENSOANG00000014398	YTHDC1	51	57.453	Ornithorhynchus_anatinus
ENSNBRG00000007663	ythdc1	87	80.907	ENSORLG00000030544	ythdc1	73	82.439	Oryzias_latipes
ENSNBRG00000007663	ythdc1	87	79.475	ENSORLG00020019316	ythdc1	73	82.927	Oryzias_latipes_hni
ENSNBRG00000007663	ythdc1	87	78.118	ENSOMEG00000000551	ythdc1	73	78.846	Oryzias_melastigma
ENSNBRG00000007663	ythdc1	70	67.056	ENSOGAG00000003362	YTHDC1	57	60.890	Otolemur_garnettii
ENSNBRG00000007663	ythdc1	70	65.421	ENSOARG00000008633	YTHDC1	57	60.187	Ovis_aries
ENSNBRG00000007663	ythdc1	70	66.019	ENSPPAG00000041315	YTHDC1	60	63.665	Pan_paniscus
ENSNBRG00000007663	ythdc1	70	65.777	ENSPPRG00000011979	YTHDC1	60	62.349	Panthera_pardus
ENSNBRG00000007663	ythdc1	70	65.291	ENSPTIG00000015527	YTHDC1	61	61.747	Panthera_tigris_altaica
ENSNBRG00000007663	ythdc1	70	66.019	ENSPTRG00000016105	YTHDC1	60	63.665	Pan_troglodytes
ENSNBRG00000007663	ythdc1	70	66.019	ENSPANG00000021590	YTHDC1	59	63.889	Papio_anubis
ENSNBRG00000007663	ythdc1	95	60.909	ENSPKIG00000018497	ythdc1	69	61.790	Paramormyrops_kingsleyae
ENSNBRG00000007663	ythdc1	70	64.501	ENSPSIG00000002782	YTHDC1	60	60.187	Pelodiscus_sinensis
ENSNBRG00000007663	ythdc1	68	75.786	ENSPMGG00000000970	-	64	76.190	Periophthalmus_magnuspinnatus
ENSNBRG00000007663	ythdc1	70	66.355	ENSPEMG00000013850	Ythdc1	60	62.121	Peromyscus_maniculatus_bairdii
ENSNBRG00000007663	ythdc1	70	66.355	ENSPCIG00000006870	YTHDC1	59	60.890	Phascolarctos_cinereus
ENSNBRG00000007663	ythdc1	87	73.684	ENSPFOG00000013404	ythdc1	86	69.640	Poecilia_formosa
ENSNBRG00000007663	ythdc1	71	82.108	ENSPLAG00000011079	ythdc1	87	82.482	Poecilia_latipinna
ENSNBRG00000007663	ythdc1	87	73.684	ENSPMEG00000009238	ythdc1	73	82.482	Poecilia_mexicana
ENSNBRG00000007663	ythdc1	91	74.713	ENSPREG00000016973	ythdc1	67	85.152	Poecilia_reticulata
ENSNBRG00000007663	ythdc1	70	66.589	ENSPPYG00000014726	YTHDC1	65	60.422	Pongo_abelii
ENSNBRG00000007663	ythdc1	73	60.723	ENSPCOG00000019105	YTHDC1	58	61.386	Propithecus_coquereli
ENSNBRG00000007663	ythdc1	70	63.084	ENSPVAG00000015551	YTHDC1	56	57.611	Pteropus_vampyrus
ENSNBRG00000007663	ythdc1	100	84.968	ENSPNYG00000011687	ythdc1	73	100.000	Pundamilia_nyererei
ENSNBRG00000007663	ythdc1	71	72.973	ENSPNAG00000028365	ythdc1	58	67.076	Pygocentrus_nattereri
ENSNBRG00000007663	ythdc1	70	65.138	ENSRNOG00000001996	Ythdc1	60	61.261	Rattus_norvegicus
ENSNBRG00000007663	ythdc1	70	65.668	ENSRBIG00000028279	YTHDC1	60	63.950	Rhinopithecus_bieti
ENSNBRG00000007663	ythdc1	70	66.589	ENSRROG00000035028	YTHDC1	60	63.889	Rhinopithecus_roxellana
ENSNBRG00000007663	ythdc1	70	66.019	ENSSBOG00000022353	YTHDC1	60	63.889	Saimiri_boliviensis_boliviensis
ENSNBRG00000007663	ythdc1	70	66.355	ENSSHAG00000002538	YTHDC1	65	60.890	Sarcophilus_harrisii
ENSNBRG00000007663	ythdc1	86	62.288	ENSSFOG00015003298	ythdc1	59	67.488	Scleropages_formosus
ENSNBRG00000007663	ythdc1	87	80.191	ENSSMAG00000009086	ythdc1	74	84.709	Scophthalmus_maximus
ENSNBRG00000007663	ythdc1	87	86.936	ENSSDUG00000022008	ythdc1	73	79.604	Seriola_dumerili
ENSNBRG00000007663	ythdc1	87	86.698	ENSSLDG00000007926	ythdc1	73	79.406	Seriola_lalandi_dorsalis
ENSNBRG00000007663	ythdc1	70	65.654	ENSSARG00000010960	YTHDC1	72	60.187	Sorex_araneus
ENSNBRG00000007663	ythdc1	70	66.000	ENSSPUG00000009357	YTHDC1	61	59.953	Sphenodon_punctatus
ENSNBRG00000007663	ythdc1	87	84.123	ENSSPAG00000011449	ythdc1	87	76.975	Stegastes_partitus
ENSNBRG00000007663	ythdc1	70	66.355	ENSSSCG00000035505	YTHDC1	64	63.222	Sus_scrofa
ENSNBRG00000007663	ythdc1	70	65.197	ENSTGUG00000004452	-	59	60.656	Taeniopygia_guttata
ENSNBRG00000007663	ythdc1	86	80.353	ENSTRUG00000010142	ythdc1	64	85.025	Takifugu_rubripes
ENSNBRG00000007663	ythdc1	96	71.403	ENSTNIG00000013243	ythdc1	83	72.661	Tetraodon_nigroviridis
ENSNBRG00000007663	ythdc1	70	65.187	ENSTTRG00000005083	YTHDC1	57	59.719	Tursiops_truncatus
ENSNBRG00000007663	ythdc1	70	66.355	ENSUAMG00000010388	YTHDC1	61	60.890	Ursus_americanus
ENSNBRG00000007663	ythdc1	86	51.434	ENSUMAG00000013668	YTHDC1	61	52.425	Ursus_maritimus
ENSNBRG00000007663	ythdc1	70	64.720	ENSVPAG00000009040	YTHDC1	56	59.314	Vicugna_pacos
ENSNBRG00000007663	ythdc1	70	66.355	ENSVVUG00000005387	YTHDC1	59	63.303	Vulpes_vulpes
ENSNBRG00000007663	ythdc1	91	55.254	ENSXETG00000017960	ythdc1	57	64.662	Xenopus_tropicalis
ENSNBRG00000007663	ythdc1	67	62.198	ENSXCOG00000000530	ythdc1	76	56.510	Xiphophorus_couchianus
ENSNBRG00000007663	ythdc1	87	77.804	ENSXMAG00000005196	ythdc1	87	69.218	Xiphophorus_maculatus