EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000007881 (Gene tree)
Gene ID: 102793689
Gene Symbol: EDC3 (1 of many)
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 19895 bases
Position: chrJH422273.1:5092238-5112132
Accession: 102793689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010144	FDF	PF09532.10	8.4e-08	1	1
ENSNBRP00000010144	LSM14	PF12701.7	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010425	EDC3 (1 of many)-201	1446	XM_006779738	ENSNBRP00000010144	481 (aa)	XP_006779801	-

Gene Model

Click here to download ENSNBRG00000007881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000007881	EDC3	100	65.424	ENSNBRG00000002434	edc3	99	65.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007881	EDC3	99	58.594	ENSG00000179151	EDC3	100	77.778	Homo_sapiens
ENSNBRG00000007881	EDC3	99	73.374	ENSAPOG00000008655	EDC3	99	73.374	Acanthochromis_polyacanthus
ENSNBRG00000007881	EDC3	100	67.495	ENSAPOG00000010791	edc3	100	67.495	Acanthochromis_polyacanthus
ENSNBRG00000007881	EDC3	100	58.285	ENSAMEG00000008963	EDC3	100	58.285	Ailuropoda_melanoleuca
ENSNBRG00000007881	EDC3	99	65.975	ENSACIG00000017751	edc3	99	65.975	Amphilophus_citrinellus
ENSNBRG00000007881	EDC3	100	90.342	ENSACIG00000005330	EDC3	100	90.543	Amphilophus_citrinellus
ENSNBRG00000007881	EDC3	99	78.125	ENSAOCG00000009103	-	99	78.125	Amphiprion_ocellaris
ENSNBRG00000007881	EDC3	100	67.288	ENSAOCG00000005431	edc3	100	67.288	Amphiprion_ocellaris
ENSNBRG00000007881	EDC3	100	67.288	ENSAPEG00000000968	edc3	100	67.288	Amphiprion_percula
ENSNBRG00000007881	EDC3	99	78.125	ENSAPEG00000007841	EDC3	99	78.125	Amphiprion_percula
ENSNBRG00000007881	EDC3	99	76.715	ENSATEG00000004205	-	99	76.715	Anabas_testudineus
ENSNBRG00000007881	EDC3	100	66.667	ENSATEG00000015505	edc3	100	66.667	Anabas_testudineus
ENSNBRG00000007881	EDC3	73	70.286	ENSAPLG00000008957	EDC3	76	70.286	Anas_platyrhynchos
ENSNBRG00000007881	EDC3	77	54.613	ENSACAG00000000460	-	100	54.613	Anolis_carolinensis
ENSNBRG00000007881	EDC3	99	59.180	ENSANAG00000024078	EDC3	99	59.180	Aotus_nancymaae
ENSNBRG00000007881	EDC3	99	66.183	ENSACLG00000007232	edc3	99	66.183	Astatotilapia_calliptera
ENSNBRG00000007881	EDC3	100	97.089	ENSACLG00000018776	-	100	97.089	Astatotilapia_calliptera
ENSNBRG00000007881	EDC3	100	64.637	ENSAMXG00000001589	edc3	100	64.637	Astyanax_mexicanus
ENSNBRG00000007881	EDC3	99	59.180	ENSBTAG00000007308	EDC3	99	59.180	Bos_taurus
ENSNBRG00000007881	EDC3	99	59.180	ENSCJAG00000017681	EDC3	99	59.180	Callithrix_jacchus
ENSNBRG00000007881	EDC3	99	58.984	ENSCAFG00000017935	EDC3	100	58.674	Canis_familiaris
ENSNBRG00000007881	EDC3	99	58.984	ENSCAFG00020003909	EDC3	100	58.674	Canis_lupus_dingo
ENSNBRG00000007881	EDC3	99	58.984	ENSCHIG00000023658	EDC3	99	58.984	Capra_hircus
ENSNBRG00000007881	EDC3	99	58.789	ENSTSYG00000004822	EDC3	99	58.789	Carlito_syrichta
ENSNBRG00000007881	EDC3	99	58.984	ENSCPOG00000015595	EDC3	99	58.984	Cavia_porcellus
ENSNBRG00000007881	EDC3	99	58.984	ENSCCAG00000021663	EDC3	99	58.984	Cebus_capucinus
ENSNBRG00000007881	EDC3	99	59.375	ENSCATG00000037511	EDC3	99	59.375	Cercocebus_atys
ENSNBRG00000007881	EDC3	99	58.594	ENSCLAG00000005700	EDC3	99	58.594	Chinchilla_lanigera
ENSNBRG00000007881	EDC3	99	59.375	ENSCSAG00000014239	EDC3	99	59.375	Chlorocebus_sabaeus
ENSNBRG00000007881	EDC3	99	58.789	ENSCPBG00000024239	EDC3	99	58.789	Chrysemys_picta_bellii
ENSNBRG00000007881	EDC3	99	36.117	ENSCING00000022142	-	99	36.117	Ciona_intestinalis
ENSNBRG00000007881	EDC3	99	59.375	ENSCANG00000028699	EDC3	99	59.375	Colobus_angolensis_palliatus
ENSNBRG00000007881	EDC3	99	58.203	ENSCGRG00001013874	Edc3	99	58.203	Cricetulus_griseus_chok1gshd
ENSNBRG00000007881	EDC3	99	58.203	ENSCGRG00000011885	Edc3	99	58.203	Cricetulus_griseus_crigri
ENSNBRG00000007881	EDC3	99	67.427	ENSCSEG00000012996	edc3	99	67.427	Cynoglossus_semilaevis
ENSNBRG00000007881	EDC3	100	65.631	ENSCVAG00000008023	edc3	100	65.631	Cyprinodon_variegatus
ENSNBRG00000007881	EDC3	99	62.868	ENSDARG00000051931	edc3	99	62.475	Danio_rerio
ENSNBRG00000007881	EDC3	99	52.000	ENSDNOG00000030661	EDC3	99	52.000	Dasypus_novemcinctus
ENSNBRG00000007881	EDC3	69	77.778	ENSETEG00000002398	-	64	77.778	Echinops_telfairi
ENSNBRG00000007881	EDC3	99	58.984	ENSEASG00005005071	EDC3	99	58.984	Equus_asinus_asinus
ENSNBRG00000007881	EDC3	99	58.984	ENSECAG00000017994	EDC3	99	58.984	Equus_caballus
ENSNBRG00000007881	EDC3	100	64.198	ENSELUG00000005794	edc3	100	64.198	Esox_lucius
ENSNBRG00000007881	EDC3	100	66.804	ENSELUG00000007607	EDC3	100	66.804	Esox_lucius
ENSNBRG00000007881	EDC3	100	58.480	ENSFCAG00000002014	EDC3	100	58.480	Felis_catus
ENSNBRG00000007881	EDC3	98	58.167	ENSFALG00000004543	EDC3	96	58.167	Ficedula_albicollis
ENSNBRG00000007881	EDC3	99	58.789	ENSFDAG00000012582	EDC3	99	58.789	Fukomys_damarensis
ENSNBRG00000007881	EDC3	100	65.424	ENSFHEG00000009375	edc3	100	65.424	Fundulus_heteroclitus
ENSNBRG00000007881	EDC3	100	66.874	ENSGMOG00000002715	edc3	100	66.874	Gadus_morhua
ENSNBRG00000007881	EDC3	99	60.000	ENSGALG00000040181	EDC3	99	60.000	Gallus_gallus
ENSNBRG00000007881	EDC3	100	64.876	ENSGAFG00000014433	edc3	100	64.876	Gambusia_affinis
ENSNBRG00000007881	EDC3	99	66.863	ENSGACG00000014671	EDC3	99	67.188	Gasterosteus_aculeatus
ENSNBRG00000007881	EDC3	99	64.938	ENSGACG00000009783	edc3	99	64.938	Gasterosteus_aculeatus
ENSNBRG00000007881	EDC3	99	60.196	ENSGAGG00000023477	EDC3	99	60.196	Gopherus_agassizii
ENSNBRG00000007881	EDC3	99	58.594	ENSGGOG00000003552	EDC3	99	58.594	Gorilla_gorilla
ENSNBRG00000007881	EDC3	99	66.183	ENSHBUG00000003635	edc3	99	66.183	Haplochromis_burtoni
ENSNBRG00000007881	EDC3	100	97.297	ENSHBUG00000020817	EDC3	100	97.297	Haplochromis_burtoni
ENSNBRG00000007881	EDC3	99	64.938	ENSHCOG00000016834	edc3	99	64.938	Hippocampus_comes
ENSNBRG00000007881	EDC3	99	64.016	ENSIPUG00000005695	edc3	100	64.016	Ictalurus_punctatus
ENSNBRG00000007881	EDC3	99	59.180	ENSSTOG00000013936	EDC3	99	59.180	Ictidomys_tridecemlineatus
ENSNBRG00000007881	EDC3	99	58.984	ENSJJAG00000008074	Edc3	99	58.984	Jaculus_jaculus
ENSNBRG00000007881	EDC3	99	65.217	ENSKMAG00000001243	edc3	100	65.289	Kryptolebias_marmoratus
ENSNBRG00000007881	EDC3	99	74.583	ENSKMAG00000001987	EDC3	99	74.583	Kryptolebias_marmoratus
ENSNBRG00000007881	EDC3	99	73.913	ENSLBEG00000017984	EDC3	99	73.913	Labrus_bergylta
ENSNBRG00000007881	EDC3	99	65.145	ENSLBEG00000013435	edc3	99	65.145	Labrus_bergylta
ENSNBRG00000007881	EDC3	99	61.122	ENSLACG00000014149	EDC3	99	61.122	Latimeria_chalumnae
ENSNBRG00000007881	EDC3	99	59.481	ENSLOCG00000014625	edc3	100	59.091	Lepisosteus_oculatus
ENSNBRG00000007881	EDC3	100	58.008	ENSLAFG00000002992	EDC3	99	58.121	Loxodonta_africana
ENSNBRG00000007881	EDC3	99	59.180	ENSMFAG00000043074	EDC3	99	59.180	Macaca_fascicularis
ENSNBRG00000007881	EDC3	99	59.180	ENSMMUG00000011071	EDC3	99	59.180	Macaca_mulatta
ENSNBRG00000007881	EDC3	99	59.180	ENSMNEG00000035316	EDC3	99	59.180	Macaca_nemestrina
ENSNBRG00000007881	EDC3	99	59.375	ENSMLEG00000030372	EDC3	99	59.375	Mandrillus_leucophaeus
ENSNBRG00000007881	EDC3	100	65.424	ENSMAMG00000000505	edc3	100	65.424	Mastacembelus_armatus
ENSNBRG00000007881	EDC3	99	76.875	ENSMAMG00000005423	-	99	76.875	Mastacembelus_armatus
ENSNBRG00000007881	EDC3	99	65.975	ENSMZEG00005004892	edc3	99	65.975	Maylandia_zebra
ENSNBRG00000007881	EDC3	100	98.960	ENSMZEG00005005654	EDC3	100	98.960	Maylandia_zebra
ENSNBRG00000007881	EDC3	99	60.352	ENSMGAG00000002617	EDC3	99	60.352	Meleagris_gallopavo
ENSNBRG00000007881	EDC3	99	59.533	ENSMICG00000043190	EDC3	99	59.533	Microcebus_murinus
ENSNBRG00000007881	EDC3	99	58.008	ENSMOCG00000016205	Edc3	99	58.008	Microtus_ochrogaster
ENSNBRG00000007881	EDC3	99	66.598	ENSMMOG00000012278	edc3	99	66.598	Mola_mola
ENSNBRG00000007881	EDC3	99	58.789	ENSMODG00000009442	EDC3	99	58.789	Monodelphis_domestica
ENSNBRG00000007881	EDC3	100	66.667	ENSMALG00000008658	edc3	100	66.667	Monopterus_albus
ENSNBRG00000007881	EDC3	99	58.594	MGP_CAROLIEiJ_G0032280	Edc3	100	72.308	Mus_caroli
ENSNBRG00000007881	EDC3	99	58.789	ENSMUSG00000038957	Edc3	100	72.308	Mus_musculus
ENSNBRG00000007881	EDC3	99	58.594	MGP_PahariEiJ_G0015146	Edc3	100	72.308	Mus_pahari
ENSNBRG00000007881	EDC3	99	58.398	MGP_SPRETEiJ_G0033420	Edc3	100	72.308	Mus_spretus
ENSNBRG00000007881	EDC3	100	58.674	ENSMPUG00000017293	EDC3	100	58.674	Mustela_putorius_furo
ENSNBRG00000007881	EDC3	99	60.311	ENSMLUG00000016382	EDC3	99	60.311	Myotis_lucifugus
ENSNBRG00000007881	EDC3	99	58.789	ENSNGAG00000010923	Edc3	99	58.789	Nannospalax_galili
ENSNBRG00000007881	EDC3	99	51.172	ENSNLEG00000014577	EDC3	99	51.172	Nomascus_leucogenys
ENSNBRG00000007881	EDC3	99	59.608	ENSMEUG00000009077	EDC3	99	59.608	Notamacropus_eugenii
ENSNBRG00000007881	EDC3	84	75.926	ENSOPRG00000009540	-	78	75.926	Ochotona_princeps
ENSNBRG00000007881	EDC3	100	89.689	ENSONIG00000002932	-	100	89.689	Oreochromis_niloticus
ENSNBRG00000007881	EDC3	100	66.046	ENSONIG00000008434	edc3	100	66.046	Oreochromis_niloticus
ENSNBRG00000007881	EDC3	77	55.611	ENSOCUG00000017740	EDC3	86	55.611	Oryctolagus_cuniculus
ENSNBRG00000007881	EDC3	99	74.583	ENSORLG00000014399	-	98	74.583	Oryzias_latipes
ENSNBRG00000007881	EDC3	100	64.742	ENSORLG00000004883	edc3	100	64.742	Oryzias_latipes
ENSNBRG00000007881	EDC3	99	74.583	ENSORLG00020019446	-	99	74.583	Oryzias_latipes_hni
ENSNBRG00000007881	EDC3	100	64.669	ENSORLG00020012262	edc3	100	64.669	Oryzias_latipes_hni
ENSNBRG00000007881	EDC3	100	64.669	ENSORLG00015005634	edc3	100	64.669	Oryzias_latipes_hsok
ENSNBRG00000007881	EDC3	99	74.167	ENSORLG00015017635	-	95	74.167	Oryzias_latipes_hsok
ENSNBRG00000007881	EDC3	99	74.792	ENSOMEG00000017354	EDC3	99	74.792	Oryzias_melastigma
ENSNBRG00000007881	EDC3	100	65.289	ENSOMEG00000014026	edc3	100	65.289	Oryzias_melastigma
ENSNBRG00000007881	EDC3	99	59.728	ENSOGAG00000014441	EDC3	100	58.674	Otolemur_garnettii
ENSNBRG00000007881	EDC3	99	58.480	ENSOARG00000003476	EDC3	99	59.259	Ovis_aries
ENSNBRG00000007881	EDC3	99	58.594	ENSPPAG00000040143	EDC3	99	58.594	Pan_paniscus
ENSNBRG00000007881	EDC3	99	58.594	ENSPPRG00000006257	EDC3	99	58.594	Panthera_pardus
ENSNBRG00000007881	EDC3	99	58.594	ENSPTIG00000017424	EDC3	99	58.594	Panthera_tigris_altaica
ENSNBRG00000007881	EDC3	99	58.594	ENSPTRG00000007279	EDC3	99	58.594	Pan_troglodytes
ENSNBRG00000007881	EDC3	99	59.375	ENSPANG00000015997	EDC3	99	59.375	Papio_anubis
ENSNBRG00000007881	EDC3	99	62.874	ENSPKIG00000019810	EDC3	99	63.273	Paramormyrops_kingsleyae
ENSNBRG00000007881	EDC3	99	62.451	ENSPKIG00000004416	edc3	99	62.451	Paramormyrops_kingsleyae
ENSNBRG00000007881	EDC3	99	54.776	ENSPSIG00000008474	EDC3	99	55.750	Pelodiscus_sinensis
ENSNBRG00000007881	EDC3	100	64.657	ENSPMGG00000007223	edc3	100	64.657	Periophthalmus_magnuspinnatus
ENSNBRG00000007881	EDC3	99	58.789	ENSPEMG00000015260	Edc3	99	58.789	Peromyscus_maniculatus_bairdii
ENSNBRG00000007881	EDC3	99	58.824	ENSPCIG00000006276	EDC3	70	58.824	Phascolarctos_cinereus
ENSNBRG00000007881	EDC3	100	65.631	ENSPFOG00000012204	edc3	100	65.631	Poecilia_formosa
ENSNBRG00000007881	EDC3	100	65.631	ENSPLAG00000014420	edc3	100	65.631	Poecilia_latipinna
ENSNBRG00000007881	EDC3	100	65.631	ENSPMEG00000023289	edc3	100	65.631	Poecilia_mexicana
ENSNBRG00000007881	EDC3	100	65.424	ENSPREG00000016022	edc3	100	65.424	Poecilia_reticulata
ENSNBRG00000007881	EDC3	100	57.505	ENSPPYG00000006642	EDC3	99	57.617	Pongo_abelii
ENSNBRG00000007881	EDC3	84	77.778	ENSPCAG00000002802	EDC3	78	77.778	Procavia_capensis
ENSNBRG00000007881	EDC3	99	58.789	ENSPCOG00000013364	EDC3	99	58.789	Propithecus_coquereli
ENSNBRG00000007881	EDC3	99	58.869	ENSPVAG00000014733	EDC3	99	59.375	Pteropus_vampyrus
ENSNBRG00000007881	EDC3	99	66.183	ENSPNYG00000021797	edc3	99	66.183	Pundamilia_nyererei
ENSNBRG00000007881	EDC3	100	97.297	ENSPNYG00000009669	EDC3	100	97.297	Pundamilia_nyererei
ENSNBRG00000007881	EDC3	100	63.261	ENSPNAG00000019657	edc3	100	63.261	Pygocentrus_nattereri
ENSNBRG00000007881	EDC3	99	58.546	ENSRNOG00000019579	Edc3	99	58.153	Rattus_norvegicus
ENSNBRG00000007881	EDC3	99	58.789	ENSRBIG00000019488	EDC3	99	58.789	Rhinopithecus_bieti
ENSNBRG00000007881	EDC3	99	58.789	ENSRROG00000034959	EDC3	99	58.789	Rhinopithecus_roxellana
ENSNBRG00000007881	EDC3	99	58.984	ENSSBOG00000004896	EDC3	99	58.984	Saimiri_boliviensis_boliviensis
ENSNBRG00000007881	EDC3	96	57.317	ENSSHAG00000015075	EDC3	95	57.317	Sarcophilus_harrisii
ENSNBRG00000007881	EDC3	99	66.736	ENSSFOG00015002439	edc3	100	67.635	Scleropages_formosus
ENSNBRG00000007881	EDC3	99	65.098	ENSSFOG00015016939	edc3	99	65.936	Scleropages_formosus
ENSNBRG00000007881	EDC3	99	74.375	ENSSMAG00000010176	-	99	74.375	Scophthalmus_maximus
ENSNBRG00000007881	EDC3	99	66.183	ENSSMAG00000010695	edc3	99	66.183	Scophthalmus_maximus
ENSNBRG00000007881	EDC3	100	66.460	ENSSDUG00000021844	edc3	99	66.598	Seriola_dumerili
ENSNBRG00000007881	EDC3	99	78.958	ENSSDUG00000007671	EDC3	99	78.958	Seriola_dumerili
ENSNBRG00000007881	EDC3	100	66.460	ENSSLDG00000022046	edc3	100	66.460	Seriola_lalandi_dorsalis
ENSNBRG00000007881	EDC3	75	75.304	ENSSARG00000003907	EDC3	72	75.304	Sorex_araneus
ENSNBRG00000007881	EDC3	99	59.144	ENSSPUG00000008232	EDC3	99	59.144	Sphenodon_punctatus
ENSNBRG00000007881	EDC3	99	79.167	ENSSPAG00000020327	EDC3	99	79.167	Stegastes_partitus
ENSNBRG00000007881	EDC3	100	66.253	ENSSPAG00000010009	edc3	100	66.253	Stegastes_partitus
ENSNBRG00000007881	EDC3	99	61.875	ENSSSCG00000001903	EDC3	99	61.875	Sus_scrofa
ENSNBRG00000007881	EDC3	99	60.392	ENSTGUG00000004007	EDC3	99	60.392	Taeniopygia_guttata
ENSNBRG00000007881	EDC3	100	67.288	ENSTRUG00000017078	edc3	100	67.288	Takifugu_rubripes
ENSNBRG00000007881	EDC3	100	66.598	ENSTNIG00000016047	edc3	100	66.598	Tetraodon_nigroviridis
ENSNBRG00000007881	EDC3	99	58.627	ENSTTRG00000007990	EDC3	99	58.627	Tursiops_truncatus
ENSNBRG00000007881	EDC3	100	58.285	ENSUAMG00000026710	-	100	58.285	Ursus_americanus
ENSNBRG00000007881	EDC3	100	58.285	ENSUMAG00000005006	EDC3	96	58.285	Ursus_maritimus
ENSNBRG00000007881	EDC3	84	70.370	ENSVPAG00000003499	-	78	70.370	Vicugna_pacos
ENSNBRG00000007881	EDC3	100	58.480	ENSVVUG00000018601	EDC3	100	58.480	Vulpes_vulpes
ENSNBRG00000007881	EDC3	73	65.625	ENSXETG00000010622	edc3	100	65.449	Xenopus_tropicalis
ENSNBRG00000007881	EDC3	100	65.496	ENSXMAG00000007377	edc3	100	65.496	Xiphophorus_maculatus