EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000007972 (Gene tree)
Gene ID: 102784297
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: U4/U6 small nuclear ribonucleoprotein Prp4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 10896 bases
Position: chrJH422276.1:4894535-4905430
Accession: 102784297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010272	PRP4	PF08799.11	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010560	-	2262	XM_006782223	ENSNBRP00000010272	510 (aa)	XP_006782286	UPI0003EBBAAC

Gene Model

Click here to download ENSNBRG00000007972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000007972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000007972	prpf4	58	31.967	ENSNBRG00000003173	tbl3	69	32.955
ENSNBRG00000007972	prpf4	56	32.500	ENSNBRG00000022135	poc1a	70	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000007972	prpf4	99	77.183	ENSG00000136875	PRPF4	96	77.183	Homo_sapiens
ENSNBRG00000007972	prpf4	99	93.996	ENSAPOG00000014132	prpf4	99	93.996	Acanthochromis_polyacanthus
ENSNBRG00000007972	prpf4	99	77.183	ENSAMEG00000013048	PRPF4	94	77.183	Ailuropoda_melanoleuca
ENSNBRG00000007972	prpf4	100	96.863	ENSACIG00000005579	prpf4	100	96.863	Amphilophus_citrinellus
ENSNBRG00000007972	prpf4	100	94.314	ENSAOCG00000005457	prpf4	100	94.314	Amphiprion_ocellaris
ENSNBRG00000007972	prpf4	100	94.118	ENSAPEG00000000776	prpf4	100	94.118	Amphiprion_percula
ENSNBRG00000007972	prpf4	100	94.314	ENSATEG00000023013	prpf4	100	94.314	Anabas_testudineus
ENSNBRG00000007972	prpf4	99	77.120	ENSAPLG00000006534	PRPF4	94	77.120	Anas_platyrhynchos
ENSNBRG00000007972	prpf4	99	75.147	ENSACAG00000015110	PRPF4	98	75.147	Anolis_carolinensis
ENSNBRG00000007972	prpf4	99	77.183	ENSANAG00000022464	PRPF4	93	77.183	Aotus_nancymaae
ENSNBRG00000007972	prpf4	100	99.804	ENSACLG00000019031	prpf4	100	99.804	Astatotilapia_calliptera
ENSNBRG00000007972	prpf4	100	61.597	ENSAMXG00000006756	prpf4	100	73.725	Astyanax_mexicanus
ENSNBRG00000007972	prpf4	99	77.183	ENSBTAG00000004571	PRPF4	96	77.183	Bos_taurus
ENSNBRG00000007972	prpf4	92	44.211	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSNBRG00000007972	prpf4	99	77.183	ENSCJAG00000017856	PRPF4	96	77.183	Callithrix_jacchus
ENSNBRG00000007972	prpf4	99	77.183	ENSCAFG00000003224	PRPF4	93	77.183	Canis_familiaris
ENSNBRG00000007972	prpf4	99	77.183	ENSCAFG00020022637	PRPF4	97	77.183	Canis_lupus_dingo
ENSNBRG00000007972	prpf4	99	77.183	ENSCHIG00000024648	-	96	77.183	Capra_hircus
ENSNBRG00000007972	prpf4	99	77.381	ENSTSYG00000010366	PRPF4	96	77.381	Carlito_syrichta
ENSNBRG00000007972	prpf4	90	69.451	ENSCAPG00000008935	PRPF4	97	69.451	Cavia_aperea
ENSNBRG00000007972	prpf4	99	76.786	ENSCPOG00000010747	-	96	76.786	Cavia_porcellus
ENSNBRG00000007972	prpf4	99	71.825	ENSCPOG00000014729	-	96	71.825	Cavia_porcellus
ENSNBRG00000007972	prpf4	99	76.984	ENSCCAG00000028990	PRPF4	96	76.984	Cebus_capucinus
ENSNBRG00000007972	prpf4	99	77.183	ENSCATG00000021552	PRPF4	96	77.183	Cercocebus_atys
ENSNBRG00000007972	prpf4	99	77.183	ENSCLAG00000013448	PRPF4	96	77.183	Chinchilla_lanigera
ENSNBRG00000007972	prpf4	89	76.770	ENSCHOG00000007233	PRPF4	100	76.770	Choloepus_hoffmanni
ENSNBRG00000007972	prpf4	99	76.331	ENSCPBG00000019136	PRPF4	73	76.331	Chrysemys_picta_bellii
ENSNBRG00000007972	prpf4	100	58.700	ENSCING00000001299	-	100	58.700	Ciona_intestinalis
ENSNBRG00000007972	prpf4	98	58.416	ENSCSAVG00000009178	-	99	60.215	Ciona_savignyi
ENSNBRG00000007972	prpf4	99	77.183	ENSCANG00000003246	PRPF4	96	77.183	Colobus_angolensis_palliatus
ENSNBRG00000007972	prpf4	99	76.984	ENSCGRG00001016992	Prpf4	96	76.984	Cricetulus_griseus_chok1gshd
ENSNBRG00000007972	prpf4	99	76.984	ENSCGRG00000017560	Prpf4	96	76.984	Cricetulus_griseus_crigri
ENSNBRG00000007972	prpf4	100	87.647	ENSCSEG00000020451	prpf4	100	87.647	Cynoglossus_semilaevis
ENSNBRG00000007972	prpf4	100	80.000	ENSDARG00000067639	prpf4	100	80.000	Danio_rerio
ENSNBRG00000007972	prpf4	99	76.984	ENSDNOG00000013203	PRPF4	96	76.984	Dasypus_novemcinctus
ENSNBRG00000007972	prpf4	99	77.579	ENSDORG00000026275	Prpf4	96	77.579	Dipodomys_ordii
ENSNBRG00000007972	prpf4	99	50.091	FBgn0036733	U4-U6-60K	99	50.272	Drosophila_melanogaster
ENSNBRG00000007972	prpf4	99	77.778	ENSETEG00000020389	PRPF4	96	77.778	Echinops_telfairi
ENSNBRG00000007972	prpf4	99	68.539	ENSEBUG00000015229	prpf4	88	69.213	Eptatretus_burgeri
ENSNBRG00000007972	prpf4	99	77.183	ENSEASG00005022678	PRPF4	96	77.183	Equus_asinus_asinus
ENSNBRG00000007972	prpf4	99	77.183	ENSECAG00000007072	PRPF4	96	77.183	Equus_caballus
ENSNBRG00000007972	prpf4	98	61.136	ENSEEUG00000007480	PRPF4	96	61.136	Erinaceus_europaeus
ENSNBRG00000007972	prpf4	100	80.784	ENSELUG00000007510	prpf4	100	80.784	Esox_lucius
ENSNBRG00000007972	prpf4	99	77.183	ENSFCAG00000005514	PRPF4	96	77.183	Felis_catus
ENSNBRG00000007972	prpf4	99	76.298	ENSFALG00000005423	PRPF4	85	76.298	Ficedula_albicollis
ENSNBRG00000007972	prpf4	99	77.183	ENSFDAG00000005839	PRPF4	96	77.183	Fukomys_damarensis
ENSNBRG00000007972	prpf4	100	92.745	ENSFHEG00000001300	prpf4	100	92.745	Fundulus_heteroclitus
ENSNBRG00000007972	prpf4	99	76.923	ENSGALG00000008857	PRPF4	94	76.923	Gallus_gallus
ENSNBRG00000007972	prpf4	85	90.274	ENSGAFG00000012164	prpf4	68	90.274	Gambusia_affinis
ENSNBRG00000007972	prpf4	100	81.445	ENSGACG00000015476	prpf4	100	81.250	Gasterosteus_aculeatus
ENSNBRG00000007972	prpf4	99	75.937	ENSGAGG00000025029	PRPF4	94	75.937	Gopherus_agassizii
ENSNBRG00000007972	prpf4	99	77.183	ENSGGOG00000006943	PRPF4	96	77.183	Gorilla_gorilla
ENSNBRG00000007972	prpf4	100	99.608	ENSHBUG00000000562	prpf4	100	99.608	Haplochromis_burtoni
ENSNBRG00000007972	prpf4	99	62.698	ENSHGLG00000003838	-	96	62.698	Heterocephalus_glaber_female
ENSNBRG00000007972	prpf4	95	66.462	ENSHGLG00000016628	-	95	66.871	Heterocephalus_glaber_female
ENSNBRG00000007972	prpf4	99	76.984	ENSHGLG00000015191	PRPF4	96	76.984	Heterocephalus_glaber_female
ENSNBRG00000007972	prpf4	99	62.698	ENSHGLG00100005571	-	96	62.698	Heterocephalus_glaber_male
ENSNBRG00000007972	prpf4	100	78.431	ENSIPUG00000017956	PRPF4	100	78.431	Ictalurus_punctatus
ENSNBRG00000007972	prpf4	99	77.183	ENSSTOG00000027833	PRPF4	96	77.183	Ictidomys_tridecemlineatus
ENSNBRG00000007972	prpf4	99	77.183	ENSJJAG00000008838	Prpf4	96	77.183	Jaculus_jaculus
ENSNBRG00000007972	prpf4	100	92.157	ENSKMAG00000013236	prpf4	100	92.157	Kryptolebias_marmoratus
ENSNBRG00000007972	prpf4	100	93.922	ENSLBEG00000020611	prpf4	100	93.922	Labrus_bergylta
ENSNBRG00000007972	prpf4	100	72.461	ENSLACG00000016317	PRPF4	97	72.461	Latimeria_chalumnae
ENSNBRG00000007972	prpf4	100	81.569	ENSLOCG00000000581	prpf4	100	81.569	Lepisosteus_oculatus
ENSNBRG00000007972	prpf4	99	77.183	ENSLAFG00000018225	PRPF4	96	77.183	Loxodonta_africana
ENSNBRG00000007972	prpf4	99	76.984	ENSMFAG00000039397	PRPF4	96	76.984	Macaca_fascicularis
ENSNBRG00000007972	prpf4	99	77.183	ENSMMUG00000005844	PRPF4	96	77.183	Macaca_mulatta
ENSNBRG00000007972	prpf4	99	68.254	ENSMNEG00000033737	PRPF4	96	68.254	Macaca_nemestrina
ENSNBRG00000007972	prpf4	99	77.183	ENSMLEG00000040284	PRPF4	96	77.183	Mandrillus_leucophaeus
ENSNBRG00000007972	prpf4	100	93.922	ENSMAMG00000020141	prpf4	100	93.922	Mastacembelus_armatus
ENSNBRG00000007972	prpf4	100	99.804	ENSMZEG00005023205	prpf4	100	99.804	Maylandia_zebra
ENSNBRG00000007972	prpf4	99	76.331	ENSMGAG00000001796	PRPF4	94	76.331	Meleagris_gallopavo
ENSNBRG00000007972	prpf4	99	76.984	ENSMAUG00000018022	Prpf4	96	76.984	Mesocricetus_auratus
ENSNBRG00000007972	prpf4	99	76.621	ENSMICG00000015022	PRPF4	97	76.621	Microcebus_murinus
ENSNBRG00000007972	prpf4	99	76.984	ENSMOCG00000018273	Prpf4	96	76.984	Microtus_ochrogaster
ENSNBRG00000007972	prpf4	100	90.980	ENSMMOG00000021177	prpf4	100	90.980	Mola_mola
ENSNBRG00000007972	prpf4	99	76.134	ENSMODG00000004444	-	97	76.134	Monodelphis_domestica
ENSNBRG00000007972	prpf4	99	75.542	ENSMODG00000025096	-	94	75.542	Monodelphis_domestica
ENSNBRG00000007972	prpf4	100	94.510	ENSMALG00000013624	prpf4	100	94.510	Monopterus_albus
ENSNBRG00000007972	prpf4	99	76.984	MGP_CAROLIEiJ_G0026078	Prpf4	96	76.984	Mus_caroli
ENSNBRG00000007972	prpf4	99	76.984	ENSMUSG00000066148	Prpf4	96	76.984	Mus_musculus
ENSNBRG00000007972	prpf4	99	77.183	MGP_PahariEiJ_G0028413	Prpf4	96	77.183	Mus_pahari
ENSNBRG00000007972	prpf4	99	76.984	MGP_SPRETEiJ_G0027042	Prpf4	96	76.984	Mus_spretus
ENSNBRG00000007972	prpf4	99	77.183	ENSMPUG00000007883	PRPF4	96	77.183	Mustela_putorius_furo
ENSNBRG00000007972	prpf4	99	76.984	ENSMLUG00000015309	-	93	76.984	Myotis_lucifugus
ENSNBRG00000007972	prpf4	99	75.595	ENSMLUG00000008626	-	94	75.595	Myotis_lucifugus
ENSNBRG00000007972	prpf4	99	72.024	ENSNGAG00000000468	Prpf4	96	72.024	Nannospalax_galili
ENSNBRG00000007972	prpf4	99	77.183	ENSNLEG00000016647	PRPF4	96	77.183	Nomascus_leucogenys
ENSNBRG00000007972	prpf4	99	75.442	ENSMEUG00000013256	PRPF4	98	75.740	Notamacropus_eugenii
ENSNBRG00000007972	prpf4	99	77.381	ENSOPRG00000005302	PRPF4	96	77.381	Ochotona_princeps
ENSNBRG00000007972	prpf4	99	77.183	ENSODEG00000018147	PRPF4	96	77.183	Octodon_degus
ENSNBRG00000007972	prpf4	100	98.824	ENSONIG00000012671	prpf4	100	98.824	Oreochromis_niloticus
ENSNBRG00000007972	prpf4	99	77.381	ENSOCUG00000005046	PRPF4	96	77.381	Oryctolagus_cuniculus
ENSNBRG00000007972	prpf4	100	91.373	ENSORLG00000019641	prpf4	100	91.373	Oryzias_latipes
ENSNBRG00000007972	prpf4	100	91.373	ENSORLG00020019438	prpf4	100	91.373	Oryzias_latipes_hni
ENSNBRG00000007972	prpf4	100	90.588	ENSOMEG00000020941	prpf4	100	91.304	Oryzias_melastigma
ENSNBRG00000007972	prpf4	99	73.016	ENSOGAG00000007802	PRPF4	94	73.016	Otolemur_garnettii
ENSNBRG00000007972	prpf4	99	77.183	ENSOARG00000006319	PRPF4	93	77.183	Ovis_aries
ENSNBRG00000007972	prpf4	99	77.183	ENSPPAG00000041797	PRPF4	96	77.183	Pan_paniscus
ENSNBRG00000007972	prpf4	99	77.183	ENSPPRG00000014360	PRPF4	96	77.183	Panthera_pardus
ENSNBRG00000007972	prpf4	99	77.183	ENSPTIG00000009574	PRPF4	96	77.183	Panthera_tigris_altaica
ENSNBRG00000007972	prpf4	99	77.183	ENSPTRG00000021274	PRPF4	96	77.183	Pan_troglodytes
ENSNBRG00000007972	prpf4	99	77.381	ENSPANG00000025776	PRPF4	92	77.381	Papio_anubis
ENSNBRG00000007972	prpf4	100	81.176	ENSPKIG00000017259	prpf4	100	81.176	Paramormyrops_kingsleyae
ENSNBRG00000007972	prpf4	100	76.275	ENSPSIG00000010713	PRPF4	89	76.529	Pelodiscus_sinensis
ENSNBRG00000007972	prpf4	100	66.171	ENSPMGG00000000997	prpf4	98	67.472	Periophthalmus_magnuspinnatus
ENSNBRG00000007972	prpf4	99	76.984	ENSPEMG00000024115	Prpf4	96	76.984	Peromyscus_maniculatus_bairdii
ENSNBRG00000007972	prpf4	99	75.639	ENSPCIG00000003821	PRPF4	98	75.937	Phascolarctos_cinereus
ENSNBRG00000007972	prpf4	100	85.798	ENSPFOG00000013524	prpf4	99	89.970	Poecilia_formosa
ENSNBRG00000007972	prpf4	84	88.820	ENSPLAG00000011620	prpf4	96	88.820	Poecilia_latipinna
ENSNBRG00000007972	prpf4	98	90.265	ENSPMEG00000006813	prpf4	100	90.265	Poecilia_mexicana
ENSNBRG00000007972	prpf4	99	76.984	ENSPCAG00000002561	PRPF4	98	76.984	Procavia_capensis
ENSNBRG00000007972	prpf4	99	76.984	ENSPCOG00000011975	PRPF4	96	76.984	Propithecus_coquereli
ENSNBRG00000007972	prpf4	99	74.008	ENSPVAG00000004708	PRPF4	96	74.008	Pteropus_vampyrus
ENSNBRG00000007972	prpf4	100	99.804	ENSPNYG00000008013	prpf4	100	99.804	Pundamilia_nyererei
ENSNBRG00000007972	prpf4	100	80.000	ENSPNAG00000000697	prpf4	100	80.196	Pygocentrus_nattereri
ENSNBRG00000007972	prpf4	99	76.984	ENSRNOG00000014777	Prpf4	96	76.984	Rattus_norvegicus
ENSNBRG00000007972	prpf4	99	77.183	ENSRBIG00000040221	PRPF4	96	77.183	Rhinopithecus_bieti
ENSNBRG00000007972	prpf4	99	77.183	ENSRROG00000040240	PRPF4	96	77.183	Rhinopithecus_roxellana
ENSNBRG00000007972	prpf4	99	75.937	ENSSHAG00000017658	PRPF4	97	75.937	Sarcophilus_harrisii
ENSNBRG00000007972	prpf4	100	82.157	ENSSFOG00015008963	prpf4	100	82.157	Scleropages_formosus
ENSNBRG00000007972	prpf4	100	91.961	ENSSMAG00000008889	prpf4	100	91.961	Scophthalmus_maximus
ENSNBRG00000007972	prpf4	99	94.617	ENSSDUG00000022083	prpf4	94	94.617	Seriola_dumerili
ENSNBRG00000007972	prpf4	99	94.410	ENSSLDG00000008115	prpf4	94	94.410	Seriola_lalandi_dorsalis
ENSNBRG00000007972	prpf4	99	76.424	ENSSPUG00000015582	PRPF4	97	76.424	Sphenodon_punctatus
ENSNBRG00000007972	prpf4	100	87.329	ENSSPAG00000011286	prpf4	100	87.329	Stegastes_partitus
ENSNBRG00000007972	prpf4	99	77.183	ENSSSCG00000024648	PRPF4	96	77.183	Sus_scrofa
ENSNBRG00000007972	prpf4	97	77.778	ENSTGUG00000002623	PRPF4	100	78.004	Taeniopygia_guttata
ENSNBRG00000007972	prpf4	100	87.843	ENSTRUG00000008853	prpf4	100	87.843	Takifugu_rubripes
ENSNBRG00000007972	prpf4	100	88.845	ENSTNIG00000013250	prpf4	100	88.845	Tetraodon_nigroviridis
ENSNBRG00000007972	prpf4	99	70.040	ENSTBEG00000000821	PRPF4	96	70.040	Tupaia_belangeri
ENSNBRG00000007972	prpf4	89	79.195	ENSTTRG00000003246	PRPF4	85	79.195	Tursiops_truncatus
ENSNBRG00000007972	prpf4	62	73.186	ENSUAMG00000018288	PRPF4	88	73.786	Ursus_americanus
ENSNBRG00000007972	prpf4	99	76.587	ENSUMAG00000019375	PRPF4	96	76.587	Ursus_maritimus
ENSNBRG00000007972	prpf4	99	76.786	ENSVPAG00000005281	PRPF4	96	76.786	Vicugna_pacos
ENSNBRG00000007972	prpf4	99	76.378	ENSVVUG00000002476	PRPF4	99	76.181	Vulpes_vulpes
ENSNBRG00000007972	prpf4	70	65.934	ENSXCOG00000006101	prpf4	93	68.949	Xiphophorus_couchianus
ENSNBRG00000007972	prpf4	91	77.849	ENSXMAG00000002750	prpf4	100	79.216	Xiphophorus_maculatus