EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008041 (Gene tree)
Gene ID: -
Gene Symbol: srsf1b
Alias: -
Full Name: serine/arginine-rich splicing factor 1b
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3374 bases
Position: chrJH422341.1:1007121-1010494
Accession: ZDB-GENE-040426-1467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010417	RRM_1	PF00076.22	1.9e-31	1	2
ENSNBRP00000010417	RRM_1	PF00076.22	1.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010709	-	699	-	ENSNBRP00000010417	232 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000008041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008041	srsf1b	65	37.870	ENSNBRG00000014709	-	71	36.752
ENSNBRG00000008041	srsf1b	64	41.143	ENSNBRG00000001285	srsf5b	77	35.246
ENSNBRG00000008041	srsf1b	78	82.258	ENSNBRG00000008134	-	95	79.583
ENSNBRG00000008041	srsf1b	78	77.895	ENSNBRG00000019981	-	99	74.590
ENSNBRG00000008041	srsf1b	72	65.517	ENSNBRG00000003888	srsf9	72	64.045
ENSNBRG00000008041	srsf1b	66	36.464	ENSNBRG00000000771	srsf5a	60	37.017
ENSNBRG00000008041	srsf1b	65	37.143	ENSNBRG00000001846	-	58	33.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008041	srsf1b	80	82.741	ENSG00000136450	SRSF1	100	92.308	Homo_sapiens
ENSNBRG00000008041	srsf1b	80	81.773	ENSAPOG00000008542	-	100	82.000	Acanthochromis_polyacanthus
ENSNBRG00000008041	srsf1b	78	77.487	ENSAPOG00000002748	-	99	74.180	Acanthochromis_polyacanthus
ENSNBRG00000008041	srsf1b	80	82.632	ENSAMEG00000002635	SRSF1	100	82.988	Ailuropoda_melanoleuca
ENSNBRG00000008041	srsf1b	78	77.895	ENSACIG00000008091	srsf1a	99	72.385	Amphilophus_citrinellus
ENSNBRG00000008041	srsf1b	80	81.773	ENSAOCG00000000337	-	100	81.452	Amphiprion_ocellaris
ENSNBRG00000008041	srsf1b	78	77.487	ENSAOCG00000010671	-	99	74.590	Amphiprion_ocellaris
ENSNBRG00000008041	srsf1b	80	81.773	ENSAPEG00000023352	-	99	81.600	Amphiprion_percula
ENSNBRG00000008041	srsf1b	78	77.487	ENSAPEG00000009915	-	99	74.590	Amphiprion_percula
ENSNBRG00000008041	srsf1b	78	77.487	ENSATEG00000022403	-	99	73.984	Anabas_testudineus
ENSNBRG00000008041	srsf1b	82	80.000	ENSATEG00000021567	-	100	80.913	Anabas_testudineus
ENSNBRG00000008041	srsf1b	80	82.234	ENSACAG00000005542	-	100	81.048	Anolis_carolinensis
ENSNBRG00000008041	srsf1b	80	82.741	ENSANAG00000020583	-	99	91.667	Aotus_nancymaae
ENSNBRG00000008041	srsf1b	81	61.170	ENSANAG00000025417	-	100	61.134	Aotus_nancymaae
ENSNBRG00000008041	srsf1b	52	65.161	ENSAMXG00000024373	-	94	71.078	Astyanax_mexicanus
ENSNBRG00000008041	srsf1b	78	79.397	ENSAMXG00000035996	srsf1a	99	79.600	Astyanax_mexicanus
ENSNBRG00000008041	srsf1b	80	82.741	ENSBTAG00000014766	SRSF1	100	79.839	Bos_taurus
ENSNBRG00000008041	srsf1b	80	82.741	ENSCJAG00000041713	-	99	91.667	Callithrix_jacchus
ENSNBRG00000008041	srsf1b	88	73.953	ENSCJAG00000008111	-	99	75.000	Callithrix_jacchus
ENSNBRG00000008041	srsf1b	80	82.741	ENSCAFG00000017430	SRSF1	97	79.675	Canis_familiaris
ENSNBRG00000008041	srsf1b	80	82.741	ENSCAFG00020025632	-	97	79.675	Canis_lupus_dingo
ENSNBRG00000008041	srsf1b	80	82.741	ENSCHIG00000010787	SRSF1	100	79.839	Capra_hircus
ENSNBRG00000008041	srsf1b	80	82.741	ENSTSYG00000013899	-	99	91.667	Carlito_syrichta
ENSNBRG00000008041	srsf1b	80	82.741	ENSCPOG00000032681	-	100	79.839	Cavia_porcellus
ENSNBRG00000008041	srsf1b	80	82.741	ENSCCAG00000029484	-	99	91.667	Cebus_capucinus
ENSNBRG00000008041	srsf1b	80	82.741	ENSCATG00000042294	-	99	91.667	Cercocebus_atys
ENSNBRG00000008041	srsf1b	80	82.741	ENSCLAG00000014707	-	100	79.839	Chinchilla_lanigera
ENSNBRG00000008041	srsf1b	80	81.726	ENSCSAG00000005642	-	97	78.862	Chlorocebus_sabaeus
ENSNBRG00000008041	srsf1b	80	82.741	ENSCHOG00000001899	SRSF1	100	79.839	Choloepus_hoffmanni
ENSNBRG00000008041	srsf1b	80	82.741	ENSCPBG00000009851	-	100	79.839	Chrysemys_picta_bellii
ENSNBRG00000008041	srsf1b	80	82.741	ENSCANG00000029726	-	99	91.667	Colobus_angolensis_palliatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSCGRG00001000670	Srsf1	97	79.675	Cricetulus_griseus_chok1gshd
ENSNBRG00000008041	srsf1b	80	82.741	ENSCGRG00000005590	Srsf1	100	79.839	Cricetulus_griseus_crigri
ENSNBRG00000008041	srsf1b	79	73.113	ENSCSEG00000009973	-	100	72.519	Cynoglossus_semilaevis
ENSNBRG00000008041	srsf1b	78	81.622	ENSCSEG00000014272	-	99	78.448	Cynoglossus_semilaevis
ENSNBRG00000008041	srsf1b	78	75.897	ENSCVAG00000005458	-	98	78.601	Cyprinodon_variegatus
ENSNBRG00000008041	srsf1b	78	77.487	ENSCVAG00000018617	-	99	74.590	Cyprinodon_variegatus
ENSNBRG00000008041	srsf1b	78	78.922	ENSDARG00000057691	srsf1a	99	79.058	Danio_rerio
ENSNBRG00000008041	srsf1b	78	80.928	ENSDARG00000017843	srsf1b	99	81.893	Danio_rerio
ENSNBRG00000008041	srsf1b	80	82.741	ENSDNOG00000011737	-	97	79.675	Dasypus_novemcinctus
ENSNBRG00000008041	srsf1b	80	82.741	ENSDORG00000015082	Srsf1	100	79.839	Dipodomys_ordii
ENSNBRG00000008041	srsf1b	74	80.978	ENSETEG00000005349	-	63	80.435	Echinops_telfairi
ENSNBRG00000008041	srsf1b	80	82.741	ENSEASG00005002922	-	97	79.675	Equus_asinus_asinus
ENSNBRG00000008041	srsf1b	80	82.741	ENSECAG00000016654	SRSF1	100	79.839	Equus_caballus
ENSNBRG00000008041	srsf1b	74	82.065	ENSEEUG00000009255	-	63	81.522	Erinaceus_europaeus
ENSNBRG00000008041	srsf1b	78	82.383	ENSELUG00000021646	srsf1a	99	71.486	Esox_lucius
ENSNBRG00000008041	srsf1b	80	82.741	ENSFCAG00000002250	-	97	79.675	Felis_catus
ENSNBRG00000008041	srsf1b	57	91.228	ENSFALG00000005062	-	97	65.447	Ficedula_albicollis
ENSNBRG00000008041	srsf1b	80	82.741	ENSFDAG00000010646	-	100	79.839	Fukomys_damarensis
ENSNBRG00000008041	srsf1b	78	77.487	ENSFHEG00000003174	srsf1a	99	74.590	Fundulus_heteroclitus
ENSNBRG00000008041	srsf1b	91	80.269	ENSGMOG00000014787	-	99	78.903	Gadus_morhua
ENSNBRG00000008041	srsf1b	80	82.741	ENSGALG00000005525	SRSF1	100	79.839	Gallus_gallus
ENSNBRG00000008041	srsf1b	80	80.952	ENSGACG00000020621	srsf1b	100	76.763	Gasterosteus_aculeatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSGAGG00000022965	-	97	79.675	Gopherus_agassizii
ENSNBRG00000008041	srsf1b	80	82.741	ENSGGOG00000004386	SRSF1	99	91.667	Gorilla_gorilla
ENSNBRG00000008041	srsf1b	78	80.208	ENSHBUG00000016788	srsf1a	99	74.590	Haplochromis_burtoni
ENSNBRG00000008041	srsf1b	66	81.098	ENSHGLG00000000600	-	100	80.000	Heterocephalus_glaber_female
ENSNBRG00000008041	srsf1b	66	81.098	ENSHGLG00000000669	-	100	80.000	Heterocephalus_glaber_female
ENSNBRG00000008041	srsf1b	80	82.741	ENSHGLG00100016906	-	100	79.839	Heterocephalus_glaber_male
ENSNBRG00000008041	srsf1b	78	76.142	ENSHCOG00000018918	srsf1a	99	70.356	Hippocampus_comes
ENSNBRG00000008041	srsf1b	80	80.612	ENSIPUG00000008750	srsf1b	100	83.673	Ictalurus_punctatus
ENSNBRG00000008041	srsf1b	78	80.402	ENSIPUG00000017039	srsf1a	99	78.000	Ictalurus_punctatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSSTOG00000000243	-	100	79.839	Ictidomys_tridecemlineatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSJJAG00000000102	-	100	79.839	Jaculus_jaculus
ENSNBRG00000008041	srsf1b	78	81.250	ENSKMAG00000019232	srsf1a	99	75.000	Kryptolebias_marmoratus
ENSNBRG00000008041	srsf1b	80	75.000	ENSLBEG00000015294	-	99	76.518	Labrus_bergylta
ENSNBRG00000008041	srsf1b	78	77.487	ENSLBEG00000020864	-	99	74.590	Labrus_bergylta
ENSNBRG00000008041	srsf1b	78	82.383	ENSLACG00000014160	srsf1a	92	79.918	Latimeria_chalumnae
ENSNBRG00000008041	srsf1b	80	81.122	ENSLOCG00000005994	srsf1a	100	81.377	Lepisosteus_oculatus
ENSNBRG00000008041	srsf1b	80	84.324	ENSLAFG00000025743	SRSF1	100	80.085	Loxodonta_africana
ENSNBRG00000008041	srsf1b	80	82.741	ENSMFAG00000040003	-	99	91.667	Macaca_fascicularis
ENSNBRG00000008041	srsf1b	80	80.203	ENSMMUG00000003260	-	95	79.592	Macaca_mulatta
ENSNBRG00000008041	srsf1b	80	82.741	ENSMMUG00000004725	SRSF1	99	91.667	Macaca_mulatta
ENSNBRG00000008041	srsf1b	80	82.741	ENSMNEG00000027680	-	99	91.667	Macaca_nemestrina
ENSNBRG00000008041	srsf1b	80	79.695	ENSMNEG00000015983	-	97	76.829	Macaca_nemestrina
ENSNBRG00000008041	srsf1b	80	82.741	ENSMLEG00000040509	SRSF1	100	79.839	Mandrillus_leucophaeus
ENSNBRG00000008041	srsf1b	80	81.771	ENSMLEG00000015243	-	97	78.423	Mandrillus_leucophaeus
ENSNBRG00000008041	srsf1b	80	82.723	ENSMAMG00000019687	-	100	80.408	Mastacembelus_armatus
ENSNBRG00000008041	srsf1b	78	77.487	ENSMAMG00000018454	-	99	74.590	Mastacembelus_armatus
ENSNBRG00000008041	srsf1b	80	88.776	ENSMAMG00000019691	-	100	87.967	Mastacembelus_armatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSMAUG00000021845	Srsf1	100	79.839	Mesocricetus_auratus
ENSNBRG00000008041	srsf1b	80	82.741	ENSMICG00000013639	-	99	91.667	Microcebus_murinus
ENSNBRG00000008041	srsf1b	80	82.741	ENSMOCG00000001996	Srsf1	100	79.839	Microtus_ochrogaster
ENSNBRG00000008041	srsf1b	78	79.058	ENSMMOG00000014354	srsf1a	99	71.967	Mola_mola
ENSNBRG00000008041	srsf1b	74	81.622	ENSMODG00000014781	-	63	83.243	Monodelphis_domestica
ENSNBRG00000008041	srsf1b	82	84.817	ENSMALG00000007763	-	100	79.130	Monopterus_albus
ENSNBRG00000008041	srsf1b	78	77.487	ENSMALG00000017129	-	75	80.729	Monopterus_albus
ENSNBRG00000008041	srsf1b	80	82.741	MGP_CAROLIEiJ_G0016943	Srsf1	100	79.839	Mus_caroli
ENSNBRG00000008041	srsf1b	80	82.741	ENSMUSG00000018379	Srsf1	100	79.839	Mus_musculus
ENSNBRG00000008041	srsf1b	80	82.741	MGP_PahariEiJ_G0018074	Srsf1	100	79.839	Mus_pahari
ENSNBRG00000008041	srsf1b	80	82.741	MGP_SPRETEiJ_G0017790	Srsf1	100	79.839	Mus_spretus
ENSNBRG00000008041	srsf1b	80	82.741	ENSMPUG00000015369	SRSF1	100	79.839	Mustela_putorius_furo
ENSNBRG00000008041	srsf1b	82	79.695	ENSMLUG00000023995	-	100	75.709	Myotis_lucifugus
ENSNBRG00000008041	srsf1b	80	82.741	ENSMLUG00000011040	SRSF1	100	79.839	Myotis_lucifugus
ENSNBRG00000008041	srsf1b	80	82.741	ENSNGAG00000011395	Srsf1	100	79.839	Nannospalax_galili
ENSNBRG00000008041	srsf1b	80	82.741	ENSNLEG00000008088	-	99	91.667	Nomascus_leucogenys
ENSNBRG00000008041	srsf1b	52	78.030	ENSOPRG00000001234	-	100	77.596	Ochotona_princeps
ENSNBRG00000008041	srsf1b	79	82.653	ENSODEG00000011481	-	100	79.435	Octodon_degus
ENSNBRG00000008041	srsf1b	78	77.895	ENSONIG00000013160	-	98	74.590	Oreochromis_niloticus
ENSNBRG00000008041	srsf1b	95	89.224	ENSONIG00000004860	-	100	88.477	Oreochromis_niloticus
ENSNBRG00000008041	srsf1b	96	64.831	ENSOCUG00000010894	-	96	60.084	Oryctolagus_cuniculus
ENSNBRG00000008041	srsf1b	78	77.487	ENSORLG00000004580	srsf1a	99	74.590	Oryzias_latipes
ENSNBRG00000008041	srsf1b	78	77.487	ENSORLG00020009456	srsf1a	99	74.590	Oryzias_latipes_hni
ENSNBRG00000008041	srsf1b	78	77.487	ENSORLG00015014384	srsf1a	99	74.180	Oryzias_latipes_hsok
ENSNBRG00000008041	srsf1b	71	77.714	ENSOMEG00000004106	srsf1a	93	71.806	Oryzias_melastigma
ENSNBRG00000008041	srsf1b	84	83.654	ENSOGAG00000025950	-	100	79.839	Otolemur_garnettii
ENSNBRG00000008041	srsf1b	80	84.946	ENSOARG00000008323	SRSF1	100	81.250	Ovis_aries
ENSNBRG00000008041	srsf1b	80	82.741	ENSPPAG00000043403	-	99	91.667	Pan_paniscus
ENSNBRG00000008041	srsf1b	80	82.741	ENSPPRG00000004238	-	100	79.839	Panthera_pardus
ENSNBRG00000008041	srsf1b	80	82.741	ENSPTRG00000049077	SRSF1	99	91.667	Pan_troglodytes
ENSNBRG00000008041	srsf1b	80	82.741	ENSPANG00000022305	-	99	91.667	Papio_anubis
ENSNBRG00000008041	srsf1b	79	61.170	ENSPANG00000030275	-	97	62.931	Papio_anubis
ENSNBRG00000008041	srsf1b	80	81.122	ENSPKIG00000012857	srsf1b	100	83.673	Paramormyrops_kingsleyae
ENSNBRG00000008041	srsf1b	78	81.771	ENSPKIG00000007204	srsf1a	99	78.601	Paramormyrops_kingsleyae
ENSNBRG00000008041	srsf1b	80	75.377	ENSPSIG00000009000	-	100	75.600	Pelodiscus_sinensis
ENSNBRG00000008041	srsf1b	78	82.162	ENSPMGG00000013112	-	99	73.362	Periophthalmus_magnuspinnatus
ENSNBRG00000008041	srsf1b	81	75.773	ENSPMGG00000005467	-	99	75.536	Periophthalmus_magnuspinnatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSPEMG00000021416	Srsf1	100	79.839	Peromyscus_maniculatus_bairdii
ENSNBRG00000008041	srsf1b	80	82.323	ENSPCIG00000006076	-	100	81.124	Phascolarctos_cinereus
ENSNBRG00000008041	srsf1b	80	76.263	ENSPFOG00000018325	-	87	78.099	Poecilia_formosa
ENSNBRG00000008041	srsf1b	80	76.263	ENSPLAG00000008416	srsf1b	98	78.099	Poecilia_latipinna
ENSNBRG00000008041	srsf1b	80	76.263	ENSPMEG00000002388	-	98	78.099	Poecilia_mexicana
ENSNBRG00000008041	srsf1b	78	77.487	ENSPREG00000009667	srsf1a	99	74.590	Poecilia_reticulata
ENSNBRG00000008041	srsf1b	80	82.741	ENSPPYG00000008240	SRSF1	100	79.839	Pongo_abelii
ENSNBRG00000008041	srsf1b	80	82.741	ENSPCAG00000005199	SRSF1	100	79.839	Procavia_capensis
ENSNBRG00000008041	srsf1b	81	68.229	ENSPCOG00000025736	-	95	64.322	Propithecus_coquereli
ENSNBRG00000008041	srsf1b	80	82.741	ENSPCOG00000023654	-	99	91.667	Propithecus_coquereli
ENSNBRG00000008041	srsf1b	58	92.308	ENSPVAG00000000519	-	75	92.308	Pteropus_vampyrus
ENSNBRG00000008041	srsf1b	80	82.292	ENSPNAG00000014601	srsf1b	100	81.224	Pygocentrus_nattereri
ENSNBRG00000008041	srsf1b	78	82.723	ENSPNAG00000022241	srsf1a	99	79.098	Pygocentrus_nattereri
ENSNBRG00000008041	srsf1b	80	82.741	ENSRNOG00000050323	Srsf1	100	79.839	Rattus_norvegicus
ENSNBRG00000008041	srsf1b	80	82.741	ENSRBIG00000034445	-	99	91.667	Rhinopithecus_bieti
ENSNBRG00000008041	srsf1b	80	82.741	ENSRROG00000041506	-	99	91.667	Rhinopithecus_roxellana
ENSNBRG00000008041	srsf1b	80	82.741	ENSSBOG00000025377	-	99	91.667	Saimiri_boliviensis_boliviensis
ENSNBRG00000008041	srsf1b	80	82.323	ENSSHAG00000002552	-	100	81.124	Sarcophilus_harrisii
ENSNBRG00000008041	srsf1b	79	80.412	ENSSFOG00015004800	srsf1a	99	80.081	Scleropages_formosus
ENSNBRG00000008041	srsf1b	78	77.487	ENSSMAG00000007018	-	99	74.590	Scophthalmus_maximus
ENSNBRG00000008041	srsf1b	80	77.941	ENSSMAG00000009719	-	100	76.078	Scophthalmus_maximus
ENSNBRG00000008041	srsf1b	100	72.065	ENSSDUG00000003929	-	99	75.304	Seriola_dumerili
ENSNBRG00000008041	srsf1b	78	77.487	ENSSDUG00000011303	-	99	74.590	Seriola_dumerili
ENSNBRG00000008041	srsf1b	94	68.261	ENSSLDG00000016895	-	100	73.770	Seriola_lalandi_dorsalis
ENSNBRG00000008041	srsf1b	80	83.333	ENSSLDG00000016868	-	99	81.277	Seriola_lalandi_dorsalis
ENSNBRG00000008041	srsf1b	78	77.487	ENSSLDG00000010543	-	99	74.590	Seriola_lalandi_dorsalis
ENSNBRG00000008041	srsf1b	74	82.065	ENSSARG00000010949	-	63	81.522	Sorex_araneus
ENSNBRG00000008041	srsf1b	80	82.741	ENSSPUG00000000804	-	97	79.675	Sphenodon_punctatus
ENSNBRG00000008041	srsf1b	78	81.250	ENSSPAG00000022562	-	99	75.000	Stegastes_partitus
ENSNBRG00000008041	srsf1b	80	79.426	ENSSPAG00000014152	-	99	79.688	Stegastes_partitus
ENSNBRG00000008041	srsf1b	80	82.741	ENSSSCG00000017626	-	100	79.839	Sus_scrofa
ENSNBRG00000008041	srsf1b	52	78.195	ENSTGUG00000008416	-	100	77.717	Taeniopygia_guttata
ENSNBRG00000008041	srsf1b	78	76.963	ENSTRUG00000003691	srsf1a	99	74.180	Takifugu_rubripes
ENSNBRG00000008041	srsf1b	78	80.729	ENSTNIG00000016223	srsf1a	98	74.180	Tetraodon_nigroviridis
ENSNBRG00000008041	srsf1b	74	80.435	ENSTBEG00000015378	-	63	82.065	Tupaia_belangeri
ENSNBRG00000008041	srsf1b	52	78.030	ENSTTRG00000007310	SRSF1	100	77.596	Tursiops_truncatus
ENSNBRG00000008041	srsf1b	80	82.741	ENSUAMG00000009858	SRSF1	100	79.839	Ursus_americanus
ENSNBRG00000008041	srsf1b	80	82.741	ENSUMAG00000000455	-	97	79.675	Ursus_maritimus
ENSNBRG00000008041	srsf1b	80	82.234	ENSVPAG00000010094	SRSF1	100	79.435	Vicugna_pacos
ENSNBRG00000008041	srsf1b	80	82.741	ENSVVUG00000011882	-	97	79.675	Vulpes_vulpes
ENSNBRG00000008041	srsf1b	80	82.199	ENSXETG00000008954	srsf1	100	74.906	Xenopus_tropicalis
ENSNBRG00000008041	srsf1b	78	77.487	ENSXMAG00000011766	srsf1a	99	74.590	Xiphophorus_maculatus