EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008062 (Gene tree)
Gene ID: 102780604
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 28587 bases
Position: chrJH422301.1:3528415-3557001
Accession: 102780604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010518	XRN_N	PF03159.18	1.7e-101	1	1
ENSNBRP00000010530	XRN_N	PF03159.18	1.2e-88	1	1
ENSNBRP00000010549	XRN_N	PF03159.18	8.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010825	-	1617	-	ENSNBRP00000010530	538 (aa)	-	-
ENSNBRT00000010812	-	2661	XM_006793491	ENSNBRP00000010518	886 (aa)	XP_006793554	-
ENSNBRT00000010843	-	294	-	ENSNBRP00000010549	97 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000008062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008062	xrn2	97	55.769	ENSNBRG00000001531	-	100	55.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008062	xrn2	97	75.810	ENSG00000088930	XRN2	90	75.810	Homo_sapiens
ENSNBRG00000008062	xrn2	98	90.509	ENSAPOG00000009818	xrn2	89	90.509	Acanthochromis_polyacanthus
ENSNBRG00000008062	xrn2	97	75.926	ENSAMEG00000012581	XRN2	90	75.926	Ailuropoda_melanoleuca
ENSNBRG00000008062	xrn2	98	87.191	ENSACIG00000015047	xrn2	95	92.500	Amphilophus_citrinellus
ENSNBRG00000008062	xrn2	98	91.088	ENSAOCG00000023632	xrn2	89	91.088	Amphiprion_ocellaris
ENSNBRG00000008062	xrn2	98	90.972	ENSAPEG00000014871	xrn2	89	90.972	Amphiprion_percula
ENSNBRG00000008062	xrn2	98	89.631	ENSATEG00000001273	xrn2	90	89.631	Anabas_testudineus
ENSNBRG00000008062	xrn2	77	97.333	ENSAPLG00000013869	XRN2	90	75.149	Anas_platyrhynchos
ENSNBRG00000008062	xrn2	77	98.667	ENSACAG00000005565	XRN2	89	75.838	Anolis_carolinensis
ENSNBRG00000008062	xrn2	97	75.926	ENSANAG00000020126	XRN2	90	75.926	Aotus_nancymaae
ENSNBRG00000008062	xrn2	100	100.000	ENSACLG00000010522	xrn2	100	100.000	Astatotilapia_calliptera
ENSNBRG00000008062	xrn2	98	83.202	ENSAMXG00000018301	xrn2	92	83.202	Astyanax_mexicanus
ENSNBRG00000008062	xrn2	96	76.667	ENSBTAG00000011304	XRN2	90	75.376	Bos_taurus
ENSNBRG00000008062	xrn2	96	66.667	WBGene00006964	xrn-2	88	54.787	Caenorhabditis_elegans
ENSNBRG00000008062	xrn2	97	75.694	ENSCJAG00000005611	XRN2	90	75.694	Callithrix_jacchus
ENSNBRG00000008062	xrn2	77	98.667	ENSCAFG00000005185	XRN2	90	75.810	Canis_familiaris
ENSNBRG00000008062	xrn2	97	75.810	ENSCAFG00020027479	XRN2	90	75.810	Canis_lupus_dingo
ENSNBRG00000008062	xrn2	97	75.029	ENSCHIG00000006921	XRN2	90	75.029	Capra_hircus
ENSNBRG00000008062	xrn2	97	75.926	ENSTSYG00000008315	XRN2	90	75.926	Carlito_syrichta
ENSNBRG00000008062	xrn2	77	98.667	ENSCAPG00000010773	XRN2	91	63.006	Cavia_aperea
ENSNBRG00000008062	xrn2	97	76.763	ENSCPOG00000009407	XRN2	90	76.763	Cavia_porcellus
ENSNBRG00000008062	xrn2	97	75.694	ENSCATG00000040350	XRN2	91	75.694	Cercocebus_atys
ENSNBRG00000008062	xrn2	97	76.273	ENSCLAG00000013419	XRN2	90	76.273	Chinchilla_lanigera
ENSNBRG00000008062	xrn2	97	75.694	ENSCSAG00000011094	XRN2	90	75.694	Chlorocebus_sabaeus
ENSNBRG00000008062	xrn2	79	96.104	ENSCHOG00000013404	XRN2	63	88.710	Choloepus_hoffmanni
ENSNBRG00000008062	xrn2	77	98.667	ENSCPBG00000023533	XRN2	90	76.322	Chrysemys_picta_bellii
ENSNBRG00000008062	xrn2	96	68.333	ENSCING00000022336	-	100	61.493	Ciona_intestinalis
ENSNBRG00000008062	xrn2	96	68.067	ENSCSAVG00000011217	-	93	71.084	Ciona_savignyi
ENSNBRG00000008062	xrn2	97	75.694	ENSCANG00000040240	XRN2	90	75.694	Colobus_angolensis_palliatus
ENSNBRG00000008062	xrn2	97	76.647	ENSCGRG00001010676	Xrn2	92	76.647	Cricetulus_griseus_chok1gshd
ENSNBRG00000008062	xrn2	77	98.667	ENSCGRG00000006378	Xrn2	89	75.476	Cricetulus_griseus_crigri
ENSNBRG00000008062	xrn2	96	77.500	ENSCSEG00000005628	xrn2	100	80.271	Cynoglossus_semilaevis
ENSNBRG00000008062	xrn2	98	86.023	ENSCVAG00000018999	xrn2	98	91.778	Cyprinodon_variegatus
ENSNBRG00000008062	xrn2	97	83.302	ENSDARG00000101900	xrn2	96	86.807	Danio_rerio
ENSNBRG00000008062	xrn2	97	75.694	ENSDNOG00000001895	XRN2	90	75.694	Dasypus_novemcinctus
ENSNBRG00000008062	xrn2	96	76.667	ENSDORG00000005434	Xrn2	90	74.306	Dipodomys_ordii
ENSNBRG00000008062	xrn2	96	71.901	FBgn0031868	Rat1	92	53.829	Drosophila_melanogaster
ENSNBRG00000008062	xrn2	96	75.833	ENSETEG00000001740	XRN2	82	81.509	Echinops_telfairi
ENSNBRG00000008062	xrn2	77	96.000	ENSEBUG00000016136	xrn2	100	69.465	Eptatretus_burgeri
ENSNBRG00000008062	xrn2	97	76.539	ENSEASG00005002484	XRN2	90	76.539	Equus_asinus_asinus
ENSNBRG00000008062	xrn2	91	92.308	ENSECAG00000018988	XRN2	86	92.308	Equus_caballus
ENSNBRG00000008062	xrn2	72	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSNBRG00000008062	xrn2	98	83.655	ENSELUG00000000552	xrn2	90	83.655	Esox_lucius
ENSNBRG00000008062	xrn2	97	75.694	ENSFCAG00000007970	XRN2	90	75.694	Felis_catus
ENSNBRG00000008062	xrn2	97	75.550	ENSFALG00000004508	XRN2	90	75.550	Ficedula_albicollis
ENSNBRG00000008062	xrn2	97	75.810	ENSFDAG00000016311	XRN2	90	75.810	Fukomys_damarensis
ENSNBRG00000008062	xrn2	99	89.899	ENSFHEG00000013039	xrn2	98	89.899	Fundulus_heteroclitus
ENSNBRG00000008062	xrn2	93	79.976	ENSGMOG00000013436	xrn2	100	79.976	Gadus_morhua
ENSNBRG00000008062	xrn2	97	75.319	ENSGALG00000008372	XRN2	90	75.319	Gallus_gallus
ENSNBRG00000008062	xrn2	98	87.729	ENSGAFG00000014284	xrn2	99	87.729	Gambusia_affinis
ENSNBRG00000008062	xrn2	94	85.271	ENSGACG00000011870	xrn2	96	88.395	Gasterosteus_aculeatus
ENSNBRG00000008062	xrn2	97	76.240	ENSGAGG00000004884	XRN2	90	76.240	Gopherus_agassizii
ENSNBRG00000008062	xrn2	97	75.694	ENSGGOG00000013738	XRN2	90	75.694	Gorilla_gorilla
ENSNBRG00000008062	xrn2	100	100.000	ENSHBUG00000005077	xrn2	100	100.000	Haplochromis_burtoni
ENSNBRG00000008062	xrn2	96	76.667	ENSHGLG00000014831	XRN2	90	75.145	Heterocephalus_glaber_female
ENSNBRG00000008062	xrn2	96	76.667	ENSHGLG00100013130	XRN2	90	75.145	Heterocephalus_glaber_male
ENSNBRG00000008062	xrn2	98	86.143	ENSHCOG00000011994	xrn2	96	82.346	Hippocampus_comes
ENSNBRG00000008062	xrn2	96	82.474	ENSIPUG00000006639	xrn2	90	82.474	Ictalurus_punctatus
ENSNBRG00000008062	xrn2	97	75.810	ENSSTOG00000000589	XRN2	90	75.810	Ictidomys_tridecemlineatus
ENSNBRG00000008062	xrn2	97	76.647	ENSJJAG00000022128	Xrn2	90	76.647	Jaculus_jaculus
ENSNBRG00000008062	xrn2	81	81.250	ENSKMAG00000002078	-	96	87.736	Kryptolebias_marmoratus
ENSNBRG00000008062	xrn2	100	91.919	ENSLBEG00000010041	xrn2	99	91.919	Labrus_bergylta
ENSNBRG00000008062	xrn2	77	98.667	ENSLACG00000008307	XRN2	97	77.599	Latimeria_chalumnae
ENSNBRG00000008062	xrn2	95	79.615	ENSLOCG00000016874	xrn2	93	80.730	Lepisosteus_oculatus
ENSNBRG00000008062	xrn2	97	75.954	ENSLAFG00000014624	XRN2	90	75.954	Loxodonta_africana
ENSNBRG00000008062	xrn2	97	75.694	ENSMFAG00000038122	XRN2	90	75.694	Macaca_fascicularis
ENSNBRG00000008062	xrn2	97	75.694	ENSMMUG00000011405	XRN2	90	75.694	Macaca_mulatta
ENSNBRG00000008062	xrn2	97	75.579	ENSMNEG00000040626	XRN2	90	75.579	Macaca_nemestrina
ENSNBRG00000008062	xrn2	97	75.579	ENSMLEG00000041897	XRN2	90	75.579	Mandrillus_leucophaeus
ENSNBRG00000008062	xrn2	98	90.092	ENSMAMG00000008633	xrn2	90	90.092	Mastacembelus_armatus
ENSNBRG00000008062	xrn2	100	99.098	ENSMZEG00005022362	xrn2	100	99.098	Maylandia_zebra
ENSNBRG00000008062	xrn2	97	74.856	ENSMGAG00000003196	XRN2	90	74.856	Meleagris_gallopavo
ENSNBRG00000008062	xrn2	97	76.532	ENSMAUG00000021842	Xrn2	90	76.532	Mesocricetus_auratus
ENSNBRG00000008062	xrn2	97	75.926	ENSMICG00000008126	XRN2	90	75.926	Microcebus_murinus
ENSNBRG00000008062	xrn2	97	76.157	ENSMOCG00000012588	Xrn2	90	76.157	Microtus_ochrogaster
ENSNBRG00000008062	xrn2	98	87.188	ENSMMOG00000017576	xrn2	98	87.064	Mola_mola
ENSNBRG00000008062	xrn2	98	75.200	ENSMODG00000006163	XRN2	91	75.200	Monodelphis_domestica
ENSNBRG00000008062	xrn2	98	87.699	ENSMALG00000011355	xrn2	95	91.747	Monopterus_albus
ENSNBRG00000008062	xrn2	97	76.042	MGP_CAROLIEiJ_G0024400	Xrn2	90	76.042	Mus_caroli
ENSNBRG00000008062	xrn2	97	76.185	ENSMUSG00000027433	Xrn2	90	76.185	Mus_musculus
ENSNBRG00000008062	xrn2	97	76.069	MGP_PahariEiJ_G0025843	Xrn2	90	76.069	Mus_pahari
ENSNBRG00000008062	xrn2	97	76.185	MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	Mus_spretus
ENSNBRG00000008062	xrn2	96	76.667	ENSMPUG00000001198	XRN2	84	74.347	Mustela_putorius_furo
ENSNBRG00000008062	xrn2	97	76.014	ENSMLUG00000001536	XRN2	90	76.014	Myotis_lucifugus
ENSNBRG00000008062	xrn2	97	76.763	ENSNGAG00000018138	Xrn2	90	76.763	Nannospalax_galili
ENSNBRG00000008062	xrn2	97	75.810	ENSNLEG00000009991	XRN2	90	75.810	Nomascus_leucogenys
ENSNBRG00000008062	xrn2	77	76.000	ENSMEUG00000008622	-	53	93.333	Notamacropus_eugenii
ENSNBRG00000008062	xrn2	62	98.333	ENSOPRG00000001397	-	63	72.105	Ochotona_princeps
ENSNBRG00000008062	xrn2	95	70.107	ENSODEG00000000860	-	91	69.787	Octodon_degus
ENSNBRG00000008062	xrn2	97	75.810	ENSODEG00000010745	-	90	75.810	Octodon_degus
ENSNBRG00000008062	xrn2	98	97.454	ENSONIG00000018720	xrn2	91	94.077	Oreochromis_niloticus
ENSNBRG00000008062	xrn2	97	75.607	ENSOANG00000015673	XRN2	90	75.607	Ornithorhynchus_anatinus
ENSNBRG00000008062	xrn2	97	76.273	ENSOCUG00000013468	XRN2	90	76.273	Oryctolagus_cuniculus
ENSNBRG00000008062	xrn2	98	88.249	ENSORLG00000017213	xrn2	98	87.771	Oryzias_latipes
ENSNBRG00000008062	xrn2	98	88.249	ENSORLG00020001824	xrn2	90	88.249	Oryzias_latipes_hni
ENSNBRG00000008062	xrn2	98	87.788	ENSORLG00015019747	xrn2	90	87.788	Oryzias_latipes_hsok
ENSNBRG00000008062	xrn2	98	87.558	ENSOMEG00000019820	xrn2	89	87.558	Oryzias_melastigma
ENSNBRG00000008062	xrn2	97	76.042	ENSOGAG00000001068	XRN2	90	76.042	Otolemur_garnettii
ENSNBRG00000008062	xrn2	77	97.333	ENSOARG00000004443	XRN2	90	74.493	Ovis_aries
ENSNBRG00000008062	xrn2	97	75.694	ENSPPAG00000033549	XRN2	90	75.694	Pan_paniscus
ENSNBRG00000008062	xrn2	97	75.694	ENSPPRG00000008732	XRN2	90	75.694	Panthera_pardus
ENSNBRG00000008062	xrn2	77	98.667	ENSPTIG00000015683	XRN2	87	75.179	Panthera_tigris_altaica
ENSNBRG00000008062	xrn2	97	75.694	ENSPTRG00000013308	XRN2	90	75.694	Pan_troglodytes
ENSNBRG00000008062	xrn2	97	75.694	ENSPANG00000018088	XRN2	90	75.694	Papio_anubis
ENSNBRG00000008062	xrn2	97	81.713	ENSPKIG00000016889	xrn2	89	81.713	Paramormyrops_kingsleyae
ENSNBRG00000008062	xrn2	68	98.485	ENSPSIG00000014666	XRN2	100	76.903	Pelodiscus_sinensis
ENSNBRG00000008062	xrn2	97	76.532	ENSPEMG00000000111	Xrn2	90	76.532	Peromyscus_maniculatus_bairdii
ENSNBRG00000008062	xrn2	59	68.358	ENSPMAG00000002576	xrn2	98	73.433	Petromyzon_marinus
ENSNBRG00000008062	xrn2	98	87.227	ENSPFOG00000004182	xrn2	90	87.227	Poecilia_formosa
ENSNBRG00000008062	xrn2	98	87.385	ENSPLAG00000007351	xrn2	98	87.385	Poecilia_latipinna
ENSNBRG00000008062	xrn2	91	86.626	ENSPMEG00000011798	xrn2	89	86.626	Poecilia_mexicana
ENSNBRG00000008062	xrn2	98	87.212	ENSPREG00000012452	xrn2	97	87.212	Poecilia_reticulata
ENSNBRG00000008062	xrn2	97	75.463	ENSPPYG00000010755	XRN2	90	75.463	Pongo_abelii
ENSNBRG00000008062	xrn2	96	76.667	ENSPCAG00000011191	XRN2	90	71.626	Procavia_capensis
ENSNBRG00000008062	xrn2	96	75.833	ENSPCOG00000016468	XRN2	89	69.213	Propithecus_coquereli
ENSNBRG00000008062	xrn2	96	76.667	ENSPVAG00000004596	XRN2	83	66.964	Pteropus_vampyrus
ENSNBRG00000008062	xrn2	100	97.294	ENSPNYG00000001765	xrn2	100	97.294	Pundamilia_nyererei
ENSNBRG00000008062	xrn2	98	81.573	ENSPNAG00000010956	xrn2	91	81.573	Pygocentrus_nattereri
ENSNBRG00000008062	xrn2	97	76.763	ENSRNOG00000011785	Xrn2	90	76.763	Rattus_norvegicus
ENSNBRG00000008062	xrn2	96	75.833	ENSRBIG00000036193	XRN2	100	77.509	Rhinopithecus_bieti
ENSNBRG00000008062	xrn2	97	75.694	ENSRROG00000044400	XRN2	81	75.694	Rhinopithecus_roxellana
ENSNBRG00000008062	xrn2	96	58.824	YOR048C	RAT1	59	54.106	Saccharomyces_cerevisiae
ENSNBRG00000008062	xrn2	97	75.926	ENSSBOG00000021014	XRN2	90	75.926	Saimiri_boliviensis_boliviensis
ENSNBRG00000008062	xrn2	97	84.223	ENSSFOG00015001091	xrn2	90	84.223	Scleropages_formosus
ENSNBRG00000008062	xrn2	98	89.133	ENSSMAG00000007834	xrn2	88	89.133	Scophthalmus_maximus
ENSNBRG00000008062	xrn2	98	87.642	ENSSDUG00000012802	xrn2	100	87.642	Seriola_dumerili
ENSNBRG00000008062	xrn2	98	90.207	ENSSLDG00000021273	xrn2	98	90.207	Seriola_lalandi_dorsalis
ENSNBRG00000008062	xrn2	68	96.000	ENSSARG00000005859	-	62	96.000	Sorex_araneus
ENSNBRG00000008062	xrn2	96	75.000	ENSSPUG00000005485	XRN2	89	73.933	Sphenodon_punctatus
ENSNBRG00000008062	xrn2	98	90.972	ENSSPAG00000016027	xrn2	89	90.972	Stegastes_partitus
ENSNBRG00000008062	xrn2	96	76.667	ENSSSCG00000007109	XRN2	90	74.335	Sus_scrofa
ENSNBRG00000008062	xrn2	97	74.480	ENSTGUG00000007535	XRN2	90	74.480	Taeniopygia_guttata
ENSNBRG00000008062	xrn2	98	86.881	ENSTRUG00000015489	xrn2	88	86.881	Takifugu_rubripes
ENSNBRG00000008062	xrn2	98	85.977	ENSTNIG00000010712	xrn2	90	85.977	Tetraodon_nigroviridis
ENSNBRG00000008062	xrn2	97	75.810	ENSTBEG00000004119	XRN2	90	75.810	Tupaia_belangeri
ENSNBRG00000008062	xrn2	96	76.667	ENSTTRG00000009087	XRN2	83	78.901	Tursiops_truncatus
ENSNBRG00000008062	xrn2	97	75.926	ENSUAMG00000024634	XRN2	95	86.618	Ursus_americanus
ENSNBRG00000008062	xrn2	77	98.667	ENSUMAG00000004012	XRN2	85	75.298	Ursus_maritimus
ENSNBRG00000008062	xrn2	85	70.410	ENSVPAG00000010694	XRN2	81	70.410	Vicugna_pacos
ENSNBRG00000008062	xrn2	97	75.810	ENSVVUG00000012178	XRN2	90	75.810	Vulpes_vulpes
ENSNBRG00000008062	xrn2	96	78.195	ENSXETG00000023501	xrn2	90	78.195	Xenopus_tropicalis
ENSNBRG00000008062	xrn2	98	87.802	ENSXMAG00000000242	xrn2	92	88.808	Xiphophorus_maculatus