EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008137 (Gene tree)
Gene ID: 102800251
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 14738 bases
Position: chrJH422283.1:10504758-10519495
Accession: 102800251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010454	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010746	-	2397	XM_006786948	ENSNBRP00000010454	205 (aa)	XP_006787011	UPI00022B3E53
ENSNBRT00000010757	-	546	-	ENSNBRP00000010465	181 (aa)	-	UPI0003944153

Gene Model

Click here to download ENSNBRG00000008137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008137	rab18b	87	39.444	ENSNBRG00000016716	rab6a	85	39.444
ENSNBRG00000008137	rab18b	71	45.578	ENSNBRG00000022235	rab33a	62	45.578
ENSNBRG00000008137	rab18b	83	40.462	ENSNBRG00000005082	RAB39B	81	40.462
ENSNBRG00000008137	rab18b	95	45.128	ENSNBRG00000020492	-	96	45.128
ENSNBRG00000008137	rab18b	79	30.120	ENSNBRG00000001521	-	78	30.120
ENSNBRG00000008137	rab18b	99	85.294	ENSNBRG00000013507	rab18a	99	85.294
ENSNBRG00000008137	rab18b	88	33.152	ENSNBRG00000019750	rab34a	70	33.152
ENSNBRG00000008137	rab18b	56	32.759	ENSNBRG00000002346	RAP2B	95	33.858
ENSNBRG00000008137	rab18b	83	46.199	ENSNBRG00000023885	-	78	46.199
ENSNBRG00000008137	rab18b	80	41.818	ENSNBRG00000021487	rab42a	62	41.818
ENSNBRG00000008137	rab18b	79	39.157	ENSNBRG00000013940	rab9b	75	39.157
ENSNBRG00000008137	rab18b	81	47.619	ENSNBRG00000001056	rab15	77	47.619
ENSNBRG00000008137	rab18b	79	40.361	ENSNBRG00000002684	zgc:101559	71	40.361
ENSNBRG00000008137	rab18b	80	34.756	ENSNBRG00000004403	kras	95	32.961
ENSNBRG00000008137	rab18b	83	39.766	ENSNBRG00000022702	rab41	79	39.766
ENSNBRG00000008137	rab18b	84	46.821	ENSNBRG00000008930	si:dkey-16l2.16	84	45.810
ENSNBRG00000008137	rab18b	86	37.989	ENSNBRG00000023214	si:dkey-13a21.4	87	37.989
ENSNBRG00000008137	rab18b	81	49.102	ENSNBRG00000003873	rab1ba	83	49.102
ENSNBRG00000008137	rab18b	89	47.340	ENSNBRG00000001241	rab2a	87	47.340
ENSNBRG00000008137	rab18b	71	44.737	ENSNBRG00000017996	-	66	44.737
ENSNBRG00000008137	rab18b	94	36.082	ENSNBRG00000011872	-	92	36.082
ENSNBRG00000008137	rab18b	73	36.774	ENSNBRG00000008714	RAB29	68	36.774
ENSNBRG00000008137	rab18b	79	49.390	ENSNBRG00000014428	rab12	67	49.390
ENSNBRG00000008137	rab18b	95	41.872	ENSNBRG00000016922	-	91	41.872
ENSNBRG00000008137	rab18b	80	46.386	ENSNBRG00000005116	rab11al	75	46.914
ENSNBRG00000008137	rab18b	97	39.000	ENSNBRG00000013673	rab6ba	95	39.000
ENSNBRG00000008137	rab18b	95	34.673	ENSNBRG00000021829	RAB7A	96	34.673
ENSNBRG00000008137	rab18b	80	38.095	ENSNBRG00000024340	RAB9A	79	38.095
ENSNBRG00000008137	rab18b	83	45.614	ENSNBRG00000023898	rab11ba	65	45.614
ENSNBRG00000008137	rab18b	79	50.000	ENSNBRG00000006202	zgc:171927	76	50.000
ENSNBRG00000008137	rab18b	95	34.673	ENSNBRG00000002772	-	96	34.673
ENSNBRG00000008137	rab18b	80	48.171	ENSNBRG00000002778	RAB15	77	48.171
ENSNBRG00000008137	rab18b	83	36.628	ENSNBRG00000013691	rab23	75	36.364
ENSNBRG00000008137	rab18b	82	46.746	ENSNBRG00000011607	rab25a	79	46.746
ENSNBRG00000008137	rab18b	97	37.688	ENSNBRG00000015905	rab6bb	95	37.688
ENSNBRG00000008137	rab18b	77	32.278	ENSNBRG00000013795	rheb	85	32.278
ENSNBRG00000008137	rab18b	80	47.561	ENSNBRG00000002726	-	76	47.561
ENSNBRG00000008137	rab18b	82	36.095	ENSNBRG00000000489	rabl2	74	36.095
ENSNBRG00000008137	rab18b	93	40.104	ENSNBRG00000011763	rab5aa	88	40.104
ENSNBRG00000008137	rab18b	83	41.860	ENSNBRG00000018106	-	81	41.860
ENSNBRG00000008137	rab18b	81	38.323	ENSNBRG00000017793	RAB17	74	38.323
ENSNBRG00000008137	rab18b	79	32.530	ENSNBRG00000022552	dnajc27	61	32.530
ENSNBRG00000008137	rab18b	80	51.220	ENSNBRG00000002082	rab30	74	51.220
ENSNBRG00000008137	rab18b	80	36.527	ENSNBRG00000002825	-	80	36.527
ENSNBRG00000008137	rab18b	73	41.060	ENSNBRG00000007077	rab33ba	59	41.060
ENSNBRG00000008137	rab18b	82	37.059	ENSNBRG00000014613	si:ch73-116o1.2	96	33.990
ENSNBRG00000008137	rab18b	77	30.247	ENSNBRG00000016978	rhebl1	85	30.247
ENSNBRG00000008137	rab18b	93	43.979	ENSNBRG00000004124	rab13	94	43.455
ENSNBRG00000008137	rab18b	83	46.199	ENSNBRG00000000372	rab11bb	78	46.199
ENSNBRG00000008137	rab18b	80	46.061	ENSNBRG00000018165	rab5c	90	42.211
ENSNBRG00000008137	rab18b	94	32.338	ENSNBRG00000007544	rab32b	92	32.338
ENSNBRG00000008137	rab18b	83	45.614	ENSNBRG00000012893	rab11a	79	45.614
ENSNBRG00000008137	rab18b	80	48.171	ENSNBRG00000005542	-	76	48.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008137	rab18b	99	84.878	ENSG00000099246	RAB18	99	85.714	Homo_sapiens
ENSNBRG00000008137	rab18b	100	96.098	ENSAPOG00000019881	rab18b	100	96.098	Acanthochromis_polyacanthus
ENSNBRG00000008137	rab18b	99	74.043	ENSAMEG00000015990	RAB18	99	74.043	Ailuropoda_melanoleuca
ENSNBRG00000008137	rab18b	100	97.561	ENSACIG00000008102	rab18b	100	97.561	Amphilophus_citrinellus
ENSNBRG00000008137	rab18b	100	96.585	ENSAOCG00000013479	rab18b	100	96.585	Amphiprion_ocellaris
ENSNBRG00000008137	rab18b	100	97.073	ENSAPEG00000022923	rab18b	100	97.073	Amphiprion_percula
ENSNBRG00000008137	rab18b	100	93.171	ENSATEG00000002952	rab18b	100	93.171	Anabas_testudineus
ENSNBRG00000008137	rab18b	99	84.878	ENSANAG00000035856	RAB18	99	84.878	Aotus_nancymaae
ENSNBRG00000008137	rab18b	100	99.512	ENSACLG00000015289	rab18b	100	99.512	Astatotilapia_calliptera
ENSNBRG00000008137	rab18b	99	87.745	ENSAMXG00000042073	rab18b	99	87.745	Astyanax_mexicanus
ENSNBRG00000008137	rab18b	99	82.927	ENSBTAG00000050873	-	99	82.927	Bos_taurus
ENSNBRG00000008137	rab18b	99	84.878	ENSBTAG00000009871	RAB18	88	84.878	Bos_taurus
ENSNBRG00000008137	rab18b	99	84.878	ENSCJAG00000045749	RAB18	99	84.878	Callithrix_jacchus
ENSNBRG00000008137	rab18b	99	84.878	ENSCAFG00020003253	RAB18	99	84.878	Canis_lupus_dingo
ENSNBRG00000008137	rab18b	99	84.878	ENSCHIG00000008749	RAB18	99	84.878	Capra_hircus
ENSNBRG00000008137	rab18b	99	84.390	ENSTSYG00000013092	RAB18	99	84.390	Carlito_syrichta
ENSNBRG00000008137	rab18b	99	84.878	ENSCPOG00000032827	RAB18	99	84.878	Cavia_porcellus
ENSNBRG00000008137	rab18b	99	84.878	ENSCCAG00000006762	RAB18	99	84.878	Cebus_capucinus
ENSNBRG00000008137	rab18b	99	84.878	ENSCATG00000009672	RAB18	99	84.878	Cercocebus_atys
ENSNBRG00000008137	rab18b	99	84.878	ENSCSAG00000011749	RAB18	99	84.878	Chlorocebus_sabaeus
ENSNBRG00000008137	rab18b	99	84.878	ENSCANG00000035397	RAB18	99	84.878	Colobus_angolensis_palliatus
ENSNBRG00000008137	rab18b	99	84.878	ENSCGRG00001017519	Rab18	99	84.878	Cricetulus_griseus_chok1gshd
ENSNBRG00000008137	rab18b	99	84.878	ENSCGRG00000017201	Rab18	99	84.878	Cricetulus_griseus_crigri
ENSNBRG00000008137	rab18b	95	94.845	ENSCSEG00000016803	rab18b	99	94.845	Cynoglossus_semilaevis
ENSNBRG00000008137	rab18b	99	88.725	ENSDARG00000098344	rab18b	99	88.725	Danio_rerio
ENSNBRG00000008137	rab18b	55	87.611	ENSDNOG00000038845	-	75	87.611	Dasypus_novemcinctus
ENSNBRG00000008137	rab18b	99	84.878	ENSDNOG00000047713	RAB18	99	84.878	Dasypus_novemcinctus
ENSNBRG00000008137	rab18b	85	82.184	ENSDORG00000029360	-	83	82.184	Dipodomys_ordii
ENSNBRG00000008137	rab18b	99	84.390	ENSDORG00000028596	-	99	84.390	Dipodomys_ordii
ENSNBRG00000008137	rab18b	99	84.878	ENSEASG00005007164	RAB18	99	84.878	Equus_asinus_asinus
ENSNBRG00000008137	rab18b	99	84.878	ENSECAG00000017521	RAB18	88	84.878	Equus_caballus
ENSNBRG00000008137	rab18b	100	86.893	ENSELUG00000016450	rab18b	100	86.893	Esox_lucius
ENSNBRG00000008137	rab18b	99	84.878	ENSFCAG00000027161	RAB18	99	84.878	Felis_catus
ENSNBRG00000008137	rab18b	94	86.458	ENSFALG00000007160	RAB18	99	83.981	Ficedula_albicollis
ENSNBRG00000008137	rab18b	100	91.707	ENSFHEG00000020035	rab18b	100	91.707	Fundulus_heteroclitus
ENSNBRG00000008137	rab18b	100	85.366	ENSGMOG00000016608	rab18b	100	85.366	Gadus_morhua
ENSNBRG00000008137	rab18b	99	84.878	ENSGALG00000007435	RAB18	99	84.878	Gallus_gallus
ENSNBRG00000008137	rab18b	100	93.171	ENSGAFG00000008560	rab18b	100	93.171	Gambusia_affinis
ENSNBRG00000008137	rab18b	100	90.732	ENSGACG00000016395	rab18b	100	90.732	Gasterosteus_aculeatus
ENSNBRG00000008137	rab18b	99	84.878	ENSGGOG00000008086	RAB18	99	84.878	Gorilla_gorilla
ENSNBRG00000008137	rab18b	100	99.512	ENSHBUG00000003696	rab18b	100	99.512	Haplochromis_burtoni
ENSNBRG00000008137	rab18b	99	85.922	ENSHGLG00000004365	RAB18	99	85.922	Heterocephalus_glaber_female
ENSNBRG00000008137	rab18b	99	71.569	ENSHGLG00000007301	-	95	71.569	Heterocephalus_glaber_female
ENSNBRG00000008137	rab18b	99	71.569	ENSHGLG00100009117	-	95	71.569	Heterocephalus_glaber_male
ENSNBRG00000008137	rab18b	99	85.922	ENSHGLG00100013089	-	99	85.922	Heterocephalus_glaber_male
ENSNBRG00000008137	rab18b	100	93.171	ENSHCOG00000002217	rab18b	100	93.171	Hippocampus_comes
ENSNBRG00000008137	rab18b	99	84.804	ENSIPUG00000010859	rab18b	99	84.804	Ictalurus_punctatus
ENSNBRG00000008137	rab18b	99	84.878	ENSSTOG00000014560	-	99	84.878	Ictidomys_tridecemlineatus
ENSNBRG00000008137	rab18b	100	91.707	ENSKMAG00000007364	rab18b	100	91.707	Kryptolebias_marmoratus
ENSNBRG00000008137	rab18b	100	92.683	ENSLBEG00000019428	rab18b	100	92.683	Labrus_bergylta
ENSNBRG00000008137	rab18b	99	76.471	ENSLACG00000011256	rab18b	99	76.471	Latimeria_chalumnae
ENSNBRG00000008137	rab18b	94	86.979	ENSLAFG00000015582	RAB18	99	84.878	Loxodonta_africana
ENSNBRG00000008137	rab18b	99	84.878	ENSMFAG00000006430	RAB18	99	84.878	Macaca_fascicularis
ENSNBRG00000008137	rab18b	99	84.653	ENSMMUG00000046971	RAB18	72	84.653	Macaca_mulatta
ENSNBRG00000008137	rab18b	99	84.878	ENSMNEG00000038180	RAB18	99	84.878	Macaca_nemestrina
ENSNBRG00000008137	rab18b	99	84.878	ENSMLEG00000033595	RAB18	99	84.878	Mandrillus_leucophaeus
ENSNBRG00000008137	rab18b	99	93.627	ENSMAMG00000018445	rab18b	99	93.627	Mastacembelus_armatus
ENSNBRG00000008137	rab18b	100	99.512	ENSMZEG00005008244	rab18b	100	99.512	Maylandia_zebra
ENSNBRG00000008137	rab18b	99	76.585	ENSMAUG00000020698	-	99	76.585	Mesocricetus_auratus
ENSNBRG00000008137	rab18b	94	86.979	ENSMICG00000017280	RAB18	99	84.878	Microcebus_murinus
ENSNBRG00000008137	rab18b	99	84.878	ENSMOCG00000013044	Rab18	99	84.878	Microtus_ochrogaster
ENSNBRG00000008137	rab18b	100	76.037	ENSMMOG00000017849	rab18b	100	77.419	Mola_mola
ENSNBRG00000008137	rab18b	99	85.784	ENSMODG00000008253	RAB18	99	85.784	Monodelphis_domestica
ENSNBRG00000008137	rab18b	99	77.941	ENSMODG00000024936	-	99	77.941	Monodelphis_domestica
ENSNBRG00000008137	rab18b	99	93.627	ENSMALG00000005069	rab18b	99	93.627	Monopterus_albus
ENSNBRG00000008137	rab18b	99	85.366	MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	Mus_caroli
ENSNBRG00000008137	rab18b	99	85.366	ENSMUSG00000073639	Rab18	99	85.366	Mus_musculus
ENSNBRG00000008137	rab18b	99	85.366	MGP_PahariEiJ_G0018716	Rab18	99	85.366	Mus_pahari
ENSNBRG00000008137	rab18b	99	85.366	MGP_SPRETEiJ_G0022894	Rab18	99	85.366	Mus_spretus
ENSNBRG00000008137	rab18b	99	84.878	ENSMPUG00000010592	RAB18	99	84.878	Mustela_putorius_furo
ENSNBRG00000008137	rab18b	99	74.043	ENSMLUG00000027295	RAB18	99	74.043	Myotis_lucifugus
ENSNBRG00000008137	rab18b	99	84.878	ENSNGAG00000001465	Rab18	99	84.878	Nannospalax_galili
ENSNBRG00000008137	rab18b	99	84.878	ENSNLEG00000016970	RAB18	99	84.878	Nomascus_leucogenys
ENSNBRG00000008137	rab18b	99	84.878	ENSODEG00000004150	-	99	84.878	Octodon_degus
ENSNBRG00000008137	rab18b	100	100.000	ENSONIG00000018673	rab18b	100	100.000	Oreochromis_niloticus
ENSNBRG00000008137	rab18b	91	89.305	ENSOANG00000021391	RAB18	99	85.437	Ornithorhynchus_anatinus
ENSNBRG00000008137	rab18b	99	83.902	ENSOCUG00000022307	RAB18	99	83.902	Oryctolagus_cuniculus
ENSNBRG00000008137	rab18b	100	91.220	ENSORLG00000009609	rab18b	100	91.220	Oryzias_latipes
ENSNBRG00000008137	rab18b	100	91.220	ENSORLG00020011590	rab18b	100	91.220	Oryzias_latipes_hni
ENSNBRG00000008137	rab18b	100	91.220	ENSORLG00015007182	rab18b	100	91.220	Oryzias_latipes_hsok
ENSNBRG00000008137	rab18b	100	91.220	ENSOMEG00000007546	rab18b	100	91.220	Oryzias_melastigma
ENSNBRG00000008137	rab18b	94	86.979	ENSOGAG00000028015	RAB18	99	84.878	Otolemur_garnettii
ENSNBRG00000008137	rab18b	99	84.878	ENSOARG00000016208	RAB18	99	84.878	Ovis_aries
ENSNBRG00000008137	rab18b	99	84.878	ENSPPAG00000041625	RAB18	99	84.878	Pan_paniscus
ENSNBRG00000008137	rab18b	99	84.878	ENSPPRG00000010314	RAB18	99	84.878	Panthera_pardus
ENSNBRG00000008137	rab18b	99	84.878	ENSPTIG00000011667	RAB18	99	84.878	Panthera_tigris_altaica
ENSNBRG00000008137	rab18b	99	84.878	ENSPTRG00000002384	RAB18	99	84.878	Pan_troglodytes
ENSNBRG00000008137	rab18b	99	84.878	ENSPANG00000023005	RAB18	99	84.878	Papio_anubis
ENSNBRG00000008137	rab18b	98	84.390	ENSPMAG00000005322	rab18b	99	84.390	Petromyzon_marinus
ENSNBRG00000008137	rab18b	99	86.275	ENSPCIG00000028705	-	88	86.275	Phascolarctos_cinereus
ENSNBRG00000008137	rab18b	100	93.659	ENSPFOG00000013491	rab18b	100	93.659	Poecilia_formosa
ENSNBRG00000008137	rab18b	100	93.659	ENSPLAG00000019136	rab18b	100	93.659	Poecilia_latipinna
ENSNBRG00000008137	rab18b	100	93.659	ENSPMEG00000008223	rab18b	100	93.659	Poecilia_mexicana
ENSNBRG00000008137	rab18b	99	84.878	ENSPPYG00000002172	RAB18	99	84.878	Pongo_abelii
ENSNBRG00000008137	rab18b	94	86.979	ENSPCOG00000018906	RAB18	99	84.878	Propithecus_coquereli
ENSNBRG00000008137	rab18b	100	99.512	ENSPNYG00000001751	rab18b	100	99.512	Pundamilia_nyererei
ENSNBRG00000008137	rab18b	99	86.275	ENSPNAG00000002404	rab18b	99	86.275	Pygocentrus_nattereri
ENSNBRG00000008137	rab18b	99	84.878	ENSRNOG00000018972	Rab18	99	84.878	Rattus_norvegicus
ENSNBRG00000008137	rab18b	99	84.390	ENSRBIG00000035948	RAB18	99	84.390	Rhinopithecus_bieti
ENSNBRG00000008137	rab18b	99	84.878	ENSRROG00000040563	RAB18	99	84.878	Rhinopithecus_roxellana
ENSNBRG00000008137	rab18b	99	86.275	ENSSHAG00000007613	RAB18	99	86.275	Sarcophilus_harrisii
ENSNBRG00000008137	rab18b	100	94.634	ENSSMAG00000011814	rab18b	100	94.634	Scophthalmus_maximus
ENSNBRG00000008137	rab18b	100	96.098	ENSSDUG00000005960	rab18b	100	96.098	Seriola_dumerili
ENSNBRG00000008137	rab18b	100	96.098	ENSSLDG00000006014	rab18b	100	96.098	Seriola_lalandi_dorsalis
ENSNBRG00000008137	rab18b	100	97.073	ENSSPAG00000020875	rab18b	100	97.073	Stegastes_partitus
ENSNBRG00000008137	rab18b	99	84.878	ENSSSCG00000028655	RAB18	99	84.878	Sus_scrofa
ENSNBRG00000008137	rab18b	94	75.799	ENSTGUG00000001105	-	99	74.249	Taeniopygia_guttata
ENSNBRG00000008137	rab18b	100	88.780	ENSTRUG00000004283	rab18b	100	88.780	Takifugu_rubripes
ENSNBRG00000008137	rab18b	100	87.379	ENSTNIG00000007882	rab18b	100	87.379	Tetraodon_nigroviridis
ENSNBRG00000008137	rab18b	99	84.878	ENSVVUG00000001705	RAB18	99	84.878	Vulpes_vulpes
ENSNBRG00000008137	rab18b	100	92.683	ENSXMAG00000006945	rab18b	100	92.683	Xiphophorus_maculatus