EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008174 (Gene tree)
Gene ID: 102799706
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat-containing protein 2%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3533 bases
Position: chrJH422319.1:1354330-1357862
Accession: 102799706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010479	MRP-S27	PF10037.9	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010772	-	2156	XM_006796803	ENSNBRP00000010479	381 (aa)	XP_006796866	-

Gene Model

Click here to download ENSNBRG00000008174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008174	ptcd2	86	94.833	ENSNBRG00000000092	-	100	94.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008174	ptcd2	96	42.480	ENSG00000049883	PTCD2	98	42.480	Homo_sapiens
ENSNBRG00000008174	ptcd2	100	79.265	ENSAPOG00000020682	ptcd2	100	79.265	Acanthochromis_polyacanthus
ENSNBRG00000008174	ptcd2	91	46.132	ENSAMEG00000007194	PTCD2	90	46.132	Ailuropoda_melanoleuca
ENSNBRG00000008174	ptcd2	90	79.885	ENSACIG00000002053	ptcd2	100	79.885	Amphilophus_citrinellus
ENSNBRG00000008174	ptcd2	100	80.840	ENSAOCG00000006616	ptcd2	98	80.840	Amphiprion_ocellaris
ENSNBRG00000008174	ptcd2	100	80.840	ENSAPEG00000022926	ptcd2	98	80.840	Amphiprion_percula
ENSNBRG00000008174	ptcd2	91	49.568	ENSACAG00000009747	PTCD2	89	49.568	Anolis_carolinensis
ENSNBRG00000008174	ptcd2	96	42.971	ENSANAG00000029353	PTCD2	97	42.971	Aotus_nancymaae
ENSNBRG00000008174	ptcd2	100	98.950	ENSACLG00000027742	ptcd2	98	98.950	Astatotilapia_calliptera
ENSNBRG00000008174	ptcd2	94	50.824	ENSAMXG00000029404	ptcd2	96	50.824	Astyanax_mexicanus
ENSNBRG00000008174	ptcd2	92	44.875	ENSBTAG00000014675	PTCD2	94	44.875	Bos_taurus
ENSNBRG00000008174	ptcd2	96	41.910	ENSCJAG00000016364	PTCD2	97	41.910	Callithrix_jacchus
ENSNBRG00000008174	ptcd2	92	48.870	ENSCAFG00000007982	PTCD2	89	47.273	Canis_familiaris
ENSNBRG00000008174	ptcd2	91	48.991	ENSCAFG00020019147	PTCD2	97	48.991	Canis_lupus_dingo
ENSNBRG00000008174	ptcd2	96	43.979	ENSCHIG00000017118	PTCD2	99	43.979	Capra_hircus
ENSNBRG00000008174	ptcd2	92	43.767	ENSCPOG00000040168	PTCD2	94	43.767	Cavia_porcellus
ENSNBRG00000008174	ptcd2	96	42.971	ENSCCAG00000029389	-	97	42.971	Cebus_capucinus
ENSNBRG00000008174	ptcd2	76	43.046	ENSCCAG00000021996	-	93	43.046	Cebus_capucinus
ENSNBRG00000008174	ptcd2	97	44.920	ENSCATG00000019069	PTCD2	98	44.920	Cercocebus_atys
ENSNBRG00000008174	ptcd2	92	44.321	ENSCLAG00000000072	PTCD2	94	44.321	Chinchilla_lanigera
ENSNBRG00000008174	ptcd2	91	45.402	ENSCSAG00000015623	PTCD2	98	44.385	Chlorocebus_sabaeus
ENSNBRG00000008174	ptcd2	72	50.588	ENSCHOG00000010634	PTCD2	79	50.588	Choloepus_hoffmanni
ENSNBRG00000008174	ptcd2	91	46.398	ENSCPBG00000000216	PTCD2	89	46.398	Chrysemys_picta_bellii
ENSNBRG00000008174	ptcd2	97	44.533	ENSCANG00000035636	PTCD2	96	44.533	Colobus_angolensis_palliatus
ENSNBRG00000008174	ptcd2	97	46.505	ENSCGRG00001015289	Ptcd2	81	46.505	Cricetulus_griseus_chok1gshd
ENSNBRG00000008174	ptcd2	97	46.505	ENSCGRG00000006193	Ptcd2	81	46.505	Cricetulus_griseus_crigri
ENSNBRG00000008174	ptcd2	99	77.368	ENSCVAG00000001285	ptcd2	97	77.368	Cyprinodon_variegatus
ENSNBRG00000008174	ptcd2	100	51.958	ENSDARG00000035391	ptcd2	100	51.958	Danio_rerio
ENSNBRG00000008174	ptcd2	91	45.245	ENSDNOG00000008719	PTCD2	91	45.245	Dasypus_novemcinctus
ENSNBRG00000008174	ptcd2	97	44.180	ENSDORG00000004921	Ptcd2	98	44.180	Dipodomys_ordii
ENSNBRG00000008174	ptcd2	91	43.840	ENSETEG00000016542	PTCD2	90	43.840	Echinops_telfairi
ENSNBRG00000008174	ptcd2	92	45.869	ENSEASG00005018038	PTCD2	92	45.869	Equus_asinus_asinus
ENSNBRG00000008174	ptcd2	92	45.869	ENSECAG00000007022	PTCD2	90	45.869	Equus_caballus
ENSNBRG00000008174	ptcd2	97	44.828	ENSEEUG00000014031	PTCD2	97	44.828	Erinaceus_europaeus
ENSNBRG00000008174	ptcd2	100	60.836	ENSELUG00000003584	ptcd2	100	60.836	Esox_lucius
ENSNBRG00000008174	ptcd2	82	48.101	ENSFCAG00000045432	PTCD2	74	48.101	Felis_catus
ENSNBRG00000008174	ptcd2	86	44.954	ENSFALG00000010299	PTCD2	99	44.954	Ficedula_albicollis
ENSNBRG00000008174	ptcd2	94	42.896	ENSFDAG00000018461	PTCD2	96	42.896	Fukomys_damarensis
ENSNBRG00000008174	ptcd2	99	62.663	ENSGMOG00000003637	ptcd2	99	62.663	Gadus_morhua
ENSNBRG00000008174	ptcd2	92	44.915	ENSGALG00000038260	PTCD2	92	44.915	Gallus_gallus
ENSNBRG00000008174	ptcd2	91	49.856	ENSGAGG00000021952	PTCD2	89	49.856	Gopherus_agassizii
ENSNBRG00000008174	ptcd2	96	42.480	ENSGGOG00000010695	PTCD2	98	42.480	Gorilla_gorilla
ENSNBRG00000008174	ptcd2	100	97.900	ENSHBUG00000009191	ptcd2	98	97.900	Haplochromis_burtoni
ENSNBRG00000008174	ptcd2	91	45.402	ENSHGLG00000001234	PTCD2	91	45.402	Heterocephalus_glaber_female
ENSNBRG00000008174	ptcd2	91	45.402	ENSHGLG00100015419	PTCD2	91	45.402	Heterocephalus_glaber_male
ENSNBRG00000008174	ptcd2	100	67.792	ENSHCOG00000001703	ptcd2	100	67.792	Hippocampus_comes
ENSNBRG00000008174	ptcd2	93	55.278	ENSIPUG00000006080	ptcd2	99	54.569	Ictalurus_punctatus
ENSNBRG00000008174	ptcd2	96	43.432	ENSSTOG00000006596	PTCD2	97	43.432	Ictidomys_tridecemlineatus
ENSNBRG00000008174	ptcd2	91	47.278	ENSJJAG00000024388	Ptcd2	91	47.278	Jaculus_jaculus
ENSNBRG00000008174	ptcd2	99	62.632	ENSKMAG00000009329	ptcd2	99	62.632	Kryptolebias_marmoratus
ENSNBRG00000008174	ptcd2	100	71.391	ENSLBEG00000024871	ptcd2	98	71.391	Labrus_bergylta
ENSNBRG00000008174	ptcd2	100	53.646	ENSLOCG00000011122	ptcd2	100	53.646	Lepisosteus_oculatus
ENSNBRG00000008174	ptcd2	72	50.545	ENSLAFG00000004115	PTCD2	88	50.545	Loxodonta_africana
ENSNBRG00000008174	ptcd2	97	45.333	ENSMFAG00000031516	PTCD2	96	45.333	Macaca_fascicularis
ENSNBRG00000008174	ptcd2	96	44.986	ENSMNEG00000007537	PTCD2	96	44.986	Macaca_nemestrina
ENSNBRG00000008174	ptcd2	97	44.800	ENSMLEG00000031093	PTCD2	96	44.800	Mandrillus_leucophaeus
ENSNBRG00000008174	ptcd2	100	77.953	ENSMAMG00000018529	ptcd2	100	77.953	Mastacembelus_armatus
ENSNBRG00000008174	ptcd2	100	98.950	ENSMZEG00005003625	ptcd2	98	98.950	Maylandia_zebra
ENSNBRG00000008174	ptcd2	91	44.828	ENSMGAG00000005033	PTCD2	100	44.828	Meleagris_gallopavo
ENSNBRG00000008174	ptcd2	91	42.745	ENSMAUG00000020253	Ptcd2	90	38.462	Mesocricetus_auratus
ENSNBRG00000008174	ptcd2	96	43.536	ENSMICG00000004535	PTCD2	98	43.536	Microcebus_murinus
ENSNBRG00000008174	ptcd2	96	45.109	ENSMOCG00000019985	Ptcd2	97	45.109	Microtus_ochrogaster
ENSNBRG00000008174	ptcd2	99	43.896	ENSMODG00000001695	PTCD2	100	43.896	Monodelphis_domestica
ENSNBRG00000008174	ptcd2	100	77.953	ENSMALG00000022372	ptcd2	100	77.953	Monopterus_albus
ENSNBRG00000008174	ptcd2	91	45.115	MGP_CAROLIEiJ_G0018829	Ptcd2	91	45.115	Mus_caroli
ENSNBRG00000008174	ptcd2	91	44.828	ENSMUSG00000021650	Ptcd2	91	44.828	Mus_musculus
ENSNBRG00000008174	ptcd2	91	45.977	MGP_PahariEiJ_G0015904	Ptcd2	91	45.977	Mus_pahari
ENSNBRG00000008174	ptcd2	91	45.690	MGP_SPRETEiJ_G0019711	Ptcd2	91	45.690	Mus_spretus
ENSNBRG00000008174	ptcd2	91	46.991	ENSMPUG00000014401	PTCD2	91	46.991	Mustela_putorius_furo
ENSNBRG00000008174	ptcd2	91	44.828	ENSMLUG00000007374	PTCD2	91	44.759	Myotis_lucifugus
ENSNBRG00000008174	ptcd2	91	44.253	ENSNGAG00000005027	Ptcd2	91	44.253	Nannospalax_galili
ENSNBRG00000008174	ptcd2	91	44.380	ENSNLEG00000004516	PTCD2	89	44.380	Nomascus_leucogenys
ENSNBRG00000008174	ptcd2	60	55.215	ENSMEUG00000014012	-	63	52.841	Notamacropus_eugenii
ENSNBRG00000008174	ptcd2	91	45.690	ENSOPRG00000007290	PTCD2	90	45.690	Ochotona_princeps
ENSNBRG00000008174	ptcd2	94	44.959	ENSODEG00000016417	PTCD2	96	44.959	Octodon_degus
ENSNBRG00000008174	ptcd2	86	96.942	ENSONIG00000011269	ptcd2	96	96.942	Oreochromis_niloticus
ENSNBRG00000008174	ptcd2	91	45.402	ENSOCUG00000007970	PTCD2	91	45.402	Oryctolagus_cuniculus
ENSNBRG00000008174	ptcd2	100	73.890	ENSORLG00000003851	ptcd2	98	73.890	Oryzias_latipes
ENSNBRG00000008174	ptcd2	100	72.846	ENSORLG00020009823	ptcd2	100	72.846	Oryzias_latipes_hni
ENSNBRG00000008174	ptcd2	91	72.464	ENSORLG00015016777	ptcd2	99	72.464	Oryzias_latipes_hsok
ENSNBRG00000008174	ptcd2	100	73.629	ENSOMEG00000012396	ptcd2	93	73.629	Oryzias_melastigma
ENSNBRG00000008174	ptcd2	96	44.063	ENSOGAG00000008390	PTCD2	98	44.063	Otolemur_garnettii
ENSNBRG00000008174	ptcd2	96	44.241	ENSOARG00000005087	PTCD2	98	44.241	Ovis_aries
ENSNBRG00000008174	ptcd2	96	42.480	ENSPPAG00000028480	PTCD2	98	42.480	Pan_paniscus
ENSNBRG00000008174	ptcd2	96	42.216	ENSPTRG00000016968	PTCD2	98	42.216	Pan_troglodytes
ENSNBRG00000008174	ptcd2	90	46.087	ENSPANG00000006611	PTCD2	89	46.087	Papio_anubis
ENSNBRG00000008174	ptcd2	100	54.663	ENSPKIG00000019896	ptcd2	100	54.663	Paramormyrops_kingsleyae
ENSNBRG00000008174	ptcd2	80	49.013	ENSPSIG00000014559	PTCD2	94	49.013	Pelodiscus_sinensis
ENSNBRG00000008174	ptcd2	96	47.027	ENSPEMG00000000884	Ptcd2	97	47.027	Peromyscus_maniculatus_bairdii
ENSNBRG00000008174	ptcd2	93	46.240	ENSPCIG00000029047	PTCD2	93	46.240	Phascolarctos_cinereus
ENSNBRG00000008174	ptcd2	99	76.053	ENSPLAG00000010456	ptcd2	99	76.053	Poecilia_latipinna
ENSNBRG00000008174	ptcd2	99	75.526	ENSPREG00000021797	ptcd2	97	75.526	Poecilia_reticulata
ENSNBRG00000008174	ptcd2	91	38.793	ENSPPYG00000015543	PTCD2	88	38.793	Pongo_abelii
ENSNBRG00000008174	ptcd2	72	41.971	ENSPCAG00000006806	PTCD2	87	41.971	Procavia_capensis
ENSNBRG00000008174	ptcd2	91	45.402	ENSPVAG00000010935	PTCD2	90	45.402	Pteropus_vampyrus
ENSNBRG00000008174	ptcd2	100	98.425	ENSPNYG00000003122	ptcd2	98	98.425	Pundamilia_nyererei
ENSNBRG00000008174	ptcd2	100	62.760	ENSPNAG00000021490	ptcd2	100	62.760	Pygocentrus_nattereri
ENSNBRG00000008174	ptcd2	96	46.216	ENSRNOG00000028403	Ptcd2	97	46.216	Rattus_norvegicus
ENSNBRG00000008174	ptcd2	97	40.533	ENSRBIG00000032929	PTCD2	96	40.533	Rhinopithecus_bieti
ENSNBRG00000008174	ptcd2	91	45.402	ENSRROG00000000080	PTCD2	91	45.402	Rhinopithecus_roxellana
ENSNBRG00000008174	ptcd2	96	42.175	ENSSBOG00000018911	PTCD2	98	42.175	Saimiri_boliviensis_boliviensis
ENSNBRG00000008174	ptcd2	97	44.562	ENSSHAG00000003833	PTCD2	97	44.562	Sarcophilus_harrisii
ENSNBRG00000008174	ptcd2	100	53.646	ENSSFOG00015015415	ptcd2	100	53.646	Scleropages_formosus
ENSNBRG00000008174	ptcd2	100	67.273	ENSSMAG00000010350	ptcd2	100	67.273	Scophthalmus_maximus
ENSNBRG00000008174	ptcd2	100	79.003	ENSSDUG00000008142	ptcd2	95	79.003	Seriola_dumerili
ENSNBRG00000008174	ptcd2	100	78.740	ENSSLDG00000015284	ptcd2	100	78.740	Seriola_lalandi_dorsalis
ENSNBRG00000008174	ptcd2	72	41.241	ENSSARG00000004983	PTCD2	87	41.241	Sorex_araneus
ENSNBRG00000008174	ptcd2	91	46.264	ENSSPUG00000000176	PTCD2	87	46.264	Sphenodon_punctatus
ENSNBRG00000008174	ptcd2	100	71.391	ENSSPAG00000008591	ptcd2	98	71.391	Stegastes_partitus
ENSNBRG00000008174	ptcd2	95	45.082	ENSSSCG00000016975	PTCD2	86	45.082	Sus_scrofa
ENSNBRG00000008174	ptcd2	90	46.087	ENSTGUG00000005705	PTCD2	99	46.087	Taeniopygia_guttata
ENSNBRG00000008174	ptcd2	97	42.820	ENSTBEG00000016559	PTCD2	98	42.820	Tupaia_belangeri
ENSNBRG00000008174	ptcd2	91	46.264	ENSTTRG00000011851	PTCD2	89	46.264	Tursiops_truncatus
ENSNBRG00000008174	ptcd2	91	46.132	ENSUAMG00000007583	PTCD2	81	46.132	Ursus_americanus
ENSNBRG00000008174	ptcd2	95	45.355	ENSUMAG00000007666	PTCD2	95	45.355	Ursus_maritimus
ENSNBRG00000008174	ptcd2	91	44.540	ENSVPAG00000009597	PTCD2	89	44.540	Vicugna_pacos
ENSNBRG00000008174	ptcd2	91	48.424	ENSVVUG00000007299	-	92	48.305	Vulpes_vulpes
ENSNBRG00000008174	ptcd2	91	45.143	ENSXETG00000031652	PTCD2	91	45.143	Xenopus_tropicalis
ENSNBRG00000008174	ptcd2	99	75.526	ENSXMAG00000005940	ptcd2	90	75.526	Xiphophorus_maculatus