EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008223 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7503 bases
Position: chrJH422547.1:62108-69610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	1	7
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	2	7
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	3	7
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	4	7
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	5	7
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	6	7
ENSNBRP00000010629	zf-C2H2	PF00096.26	4.2e-40	7	7
ENSNBRP00000010583	zf-C2H2	PF00096.26	5.6e-39	1	6
ENSNBRP00000010583	zf-C2H2	PF00096.26	5.6e-39	2	6
ENSNBRP00000010583	zf-C2H2	PF00096.26	5.6e-39	3	6
ENSNBRP00000010583	zf-C2H2	PF00096.26	5.6e-39	4	6
ENSNBRP00000010583	zf-C2H2	PF00096.26	5.6e-39	5	6
ENSNBRP00000010583	zf-C2H2	PF00096.26	5.6e-39	6	6
ENSNBRP00000010559	zf-C2H2	PF00096.26	9.8e-36	1	4
ENSNBRP00000010559	zf-C2H2	PF00096.26	9.8e-36	2	4
ENSNBRP00000010559	zf-C2H2	PF00096.26	9.8e-36	3	4
ENSNBRP00000010559	zf-C2H2	PF00096.26	9.8e-36	4	4
ENSNBRP00000010611	zf-C2H2	PF00096.26	8.8e-24	1	4
ENSNBRP00000010611	zf-C2H2	PF00096.26	8.8e-24	2	4
ENSNBRP00000010611	zf-C2H2	PF00096.26	8.8e-24	3	4
ENSNBRP00000010611	zf-C2H2	PF00096.26	8.8e-24	4	4
ENSNBRP00000010642	zf-C2H2	PF00096.26	1.9e-14	1	2
ENSNBRP00000010642	zf-C2H2	PF00096.26	1.9e-14	2	2
ENSNBRP00000010583	zf-met	PF12874.7	2.1e-17	1	4
ENSNBRP00000010583	zf-met	PF12874.7	2.1e-17	2	4
ENSNBRP00000010583	zf-met	PF12874.7	2.1e-17	3	4
ENSNBRP00000010583	zf-met	PF12874.7	2.1e-17	4	4
ENSNBRP00000010629	zf-met	PF12874.7	3.3e-16	1	4
ENSNBRP00000010629	zf-met	PF12874.7	3.3e-16	2	4
ENSNBRP00000010629	zf-met	PF12874.7	3.3e-16	3	4
ENSNBRP00000010629	zf-met	PF12874.7	3.3e-16	4	4
ENSNBRP00000010559	zf-met	PF12874.7	3.2e-14	1	2
ENSNBRP00000010559	zf-met	PF12874.7	3.2e-14	2	2
ENSNBRP00000010611	zf-met	PF12874.7	6.4e-10	1	2
ENSNBRP00000010611	zf-met	PF12874.7	6.4e-10	2	2
ENSNBRP00000010583	zf-C2H2_jaz	PF12171.8	9.6e-37	1	1
ENSNBRP00000010629	zf-C2H2_jaz	PF12171.8	3e-33	1	1
ENSNBRP00000010611	zf-C2H2_jaz	PF12171.8	8e-20	1	1
ENSNBRP00000010642	zf-C2H2_jaz	PF12171.8	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000010853	-	1125	-	ENSNBRP00000010559	374 (aa)	-	-
ENSNBRT00000010906	-	846	-	ENSNBRP00000010611	281 (aa)	-	-
ENSNBRT00000010877	-	1410	-	ENSNBRP00000010583	469 (aa)	-	-
ENSNBRT00000010937	-	468	-	ENSNBRP00000010642	155 (aa)	-	-
ENSNBRT00000010924	-	1782	-	ENSNBRP00000010629	593 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000008223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008223	-	78	36.296	ENSNBRG00000012376	-	100	36.364
ENSNBRG00000008223	-	83	40.244	ENSNBRG00000018927	znf384l	50	37.363
ENSNBRG00000008223	-	79	39.416	ENSNBRG00000024020	-	55	44.000
ENSNBRG00000008223	-	84	38.290	ENSNBRG00000024344	-	72	44.444
ENSNBRG00000008223	-	93	38.006	ENSNBRG00000024345	-	88	44.231
ENSNBRG00000008223	-	91	42.963	ENSNBRG00000002542	-	86	42.742
ENSNBRG00000008223	-	67	46.875	ENSNBRG00000014403	-	60	40.594
ENSNBRG00000008223	-	68	46.575	ENSNBRG00000018141	-	55	35.714
ENSNBRG00000008223	-	87	39.007	ENSNBRG00000009128	-	57	41.414
ENSNBRG00000008223	-	89	34.586	ENSNBRG00000021355	-	91	38.627
ENSNBRG00000008223	-	82	42.484	ENSNBRG00000023229	-	81	42.484
ENSNBRG00000008223	-	88	39.175	ENSNBRG00000015652	-	88	42.751
ENSNBRG00000008223	-	93	47.284	ENSNBRG00000016577	si:dkey-182i3.9	95	53.333
ENSNBRG00000008223	-	73	43.871	ENSNBRG00000004792	-	58	43.871
ENSNBRG00000008223	-	91	41.245	ENSNBRG00000023956	-	60	47.222
ENSNBRG00000008223	-	76	47.727	ENSNBRG00000000793	-	99	47.727
ENSNBRG00000008223	-	90	30.830	ENSNBRG00000021111	zbtb16b	53	30.830
ENSNBRG00000008223	-	99	44.118	ENSNBRG00000014088	-	96	50.847
ENSNBRG00000008223	-	85	40.000	ENSNBRG00000022534	znf646	88	33.333
ENSNBRG00000008223	-	90	37.963	ENSNBRG00000024046	-	58	45.652
ENSNBRG00000008223	-	89	39.024	ENSNBRG00000007602	-	83	46.729
ENSNBRG00000008223	-	89	39.431	ENSNBRG00000019770	-	96	43.119
ENSNBRG00000008223	-	85	45.631	ENSNBRG00000019481	-	96	45.631
ENSNBRG00000008223	-	93	45.588	ENSNBRG00000013583	-	90	50.909
ENSNBRG00000008223	-	89	45.045	ENSNBRG00000000321	-	100	43.810
ENSNBRG00000008223	-	91	40.000	ENSNBRG00000007311	-	83	41.333
ENSNBRG00000008223	-	79	43.333	ENSNBRG00000013501	-	89	42.308
ENSNBRG00000008223	-	89	34.545	ENSNBRG00000024014	-	73	38.492
ENSNBRG00000008223	-	87	33.688	ENSNBRG00000004976	prdm5	73	35.816
ENSNBRG00000008223	-	91	39.333	ENSNBRG00000020159	znf526	83	30.650
ENSNBRG00000008223	-	81	45.192	ENSNBRG00000016219	-	89	39.130
ENSNBRG00000008223	-	91	47.059	ENSNBRG00000000577	-	76	47.059
ENSNBRG00000008223	-	83	46.154	ENSNBRG00000013604	-	78	46.154
ENSNBRG00000008223	-	86	45.238	ENSNBRG00000003000	-	81	44.792
ENSNBRG00000008223	-	68	46.000	ENSNBRG00000019550	znf341	52	37.143
ENSNBRG00000008223	-	89	40.714	ENSNBRG00000001641	-	85	40.714
ENSNBRG00000008223	-	92	47.126	ENSNBRG00000021375	-	57	38.974
ENSNBRG00000008223	-	89	39.544	ENSNBRG00000024019	-	92	45.263
ENSNBRG00000008223	-	94	30.919	ENSNBRG00000021237	-	90	33.333
ENSNBRG00000008223	-	91	52.439	ENSNBRG00000024354	-	92	52.439
ENSNBRG00000008223	-	82	45.098	ENSNBRG00000022241	-	95	42.045
ENSNBRG00000008223	-	88	42.574	ENSNBRG00000002946	-	52	42.574
ENSNBRG00000008223	-	77	38.182	ENSNBRG00000001834	-	100	38.596
ENSNBRG00000008223	-	87	39.405	ENSNBRG00000024048	-	90	44.231
ENSNBRG00000008223	-	89	33.623	ENSNBRG00000010987	-	79	48.421
ENSNBRG00000008223	-	89	40.856	ENSNBRG00000003250	-	98	43.005
ENSNBRG00000008223	-	91	35.341	ENSNBRG00000008827	znf319b	91	45.455
ENSNBRG00000008223	-	78	33.803	ENSNBRG00000018449	PRDM15	50	33.043
ENSNBRG00000008223	-	76	37.811	ENSNBRG00000001761	-	57	40.278
ENSNBRG00000008223	-	89	35.196	ENSNBRG00000021967	-	83	34.018
ENSNBRG00000008223	-	89	37.799	ENSNBRG00000021960	zbtb17	53	39.073
ENSNBRG00000008223	-	94	39.676	ENSNBRG00000005849	-	97	43.529
ENSNBRG00000008223	-	95	43.750	ENSNBRG00000000523	-	66	43.689
ENSNBRG00000008223	-	94	35.714	ENSNBRG00000024066	-	95	40.708
ENSNBRG00000008223	-	71	48.077	ENSNBRG00000016639	-	53	48.077
ENSNBRG00000008223	-	89	41.860	ENSNBRG00000000492	-	90	47.297
ENSNBRG00000008223	-	79	41.333	ENSNBRG00000000305	-	81	41.333
ENSNBRG00000008223	-	91	42.051	ENSNBRG00000010405	-	91	57.143
ENSNBRG00000008223	-	99	38.053	ENSNBRG00000004523	-	94	46.032
ENSNBRG00000008223	-	77	47.423	ENSNBRG00000004723	-	90	47.423
ENSNBRG00000008223	-	79	43.210	ENSNBRG00000007276	-	76	41.935
ENSNBRG00000008223	-	95	45.299	ENSNBRG00000016550	-	94	37.385
ENSNBRG00000008223	-	88	41.753	ENSNBRG00000016234	-	78	41.753
ENSNBRG00000008223	-	89	36.957	ENSNBRG00000016032	patz1	52	30.357
ENSNBRG00000008223	-	99	48.485	ENSNBRG00000000960	-	98	46.591
ENSNBRG00000008223	-	94	44.495	ENSNBRG00000007384	-	59	41.148
ENSNBRG00000008223	-	90	42.742	ENSNBRG00000004822	-	50	48.077
ENSNBRG00000008223	-	86	46.939	ENSNBRG00000016666	-	96	46.939
ENSNBRG00000008223	-	92	41.150	ENSNBRG00000024179	-	61	49.038
ENSNBRG00000008223	-	84	44.211	ENSNBRG00000006757	-	83	40.288
ENSNBRG00000008223	-	90	46.296	ENSNBRG00000001813	-	67	46.296
ENSNBRG00000008223	-	76	40.367	ENSNBRG00000010351	-	92	40.367
ENSNBRG00000008223	-	90	37.173	ENSNBRG00000002673	gfi1aa	95	37.173
ENSNBRG00000008223	-	84	38.554	ENSNBRG00000013983	scrt1b	60	35.714
ENSNBRG00000008223	-	90	40.511	ENSNBRG00000015873	-	98	45.098
ENSNBRG00000008223	-	96	40.698	ENSNBRG00000020830	-	50	38.788
ENSNBRG00000008223	-	83	37.057	ENSNBRG00000008106	-	93	45.098
ENSNBRG00000008223	-	88	39.394	ENSNBRG00000007221	scrt2	57	41.096
ENSNBRG00000008223	-	88	33.198	ENSNBRG00000018718	zbtb47b	77	33.198
ENSNBRG00000008223	-	92	41.727	ENSNBRG00000009815	-	94	38.176
ENSNBRG00000008223	-	88	35.955	ENSNBRG00000009811	-	96	35.366
ENSNBRG00000008223	-	89	36.100	ENSNBRG00000000708	-	98	41.489
ENSNBRG00000008223	-	84	32.877	ENSNBRG00000011785	snai2	73	32.877
ENSNBRG00000008223	-	93	36.650	ENSNBRG00000005823	-	90	39.036
ENSNBRG00000008223	-	83	44.643	ENSNBRG00000005796	-	95	44.643
ENSNBRG00000008223	-	82	37.548	ENSNBRG00000024086	-	57	46.154
ENSNBRG00000008223	-	85	47.619	ENSNBRG00000006411	-	86	43.023
ENSNBRG00000008223	-	81	42.222	ENSNBRG00000016564	-	82	40.678
ENSNBRG00000008223	-	81	40.288	ENSNBRG00000019004	-	72	40.288
ENSNBRG00000008223	-	85	50.000	ENSNBRG00000009279	-	89	50.000
ENSNBRG00000008223	-	84	47.619	ENSNBRG00000009075	znf236	82	36.364
ENSNBRG00000008223	-	99	37.624	ENSNBRG00000005175	zbtb41	68	37.624
ENSNBRG00000008223	-	81	37.173	ENSNBRG00000012391	gfi1b	57	39.423
ENSNBRG00000008223	-	76	38.554	ENSNBRG00000013838	-	56	38.554
ENSNBRG00000008223	-	96	44.231	ENSNBRG00000023960	-	85	38.605
ENSNBRG00000008223	-	89	42.614	ENSNBRG00000010194	-	67	42.222
ENSNBRG00000008223	-	88	37.121	ENSNBRG00000019881	-	96	37.405
ENSNBRG00000008223	-	89	46.903	ENSNBRG00000006125	-	91	47.253
ENSNBRG00000008223	-	78	46.154	ENSNBRG00000001608	-	93	46.154
ENSNBRG00000008223	-	77	37.282	ENSNBRG00000024054	-	58	42.308
ENSNBRG00000008223	-	96	38.983	ENSNBRG00000016603	-	91	43.878
ENSNBRG00000008223	-	72	45.000	ENSNBRG00000003394	-	57	36.893
ENSNBRG00000008223	-	81	37.013	ENSNBRG00000024294	-	75	39.583
ENSNBRG00000008223	-	86	32.468	ENSNBRG00000024293	-	88	34.906
ENSNBRG00000008223	-	90	50.000	ENSNBRG00000001163	-	97	42.157
ENSNBRG00000008223	-	91	33.865	ENSNBRG00000015442	ZNF319	87	45.455
ENSNBRG00000008223	-	93	44.643	ENSNBRG00000002902	-	98	47.222
ENSNBRG00000008223	-	100	46.154	ENSNBRG00000016169	-	78	34.719
ENSNBRG00000008223	-	85	36.585	ENSNBRG00000004381	-	84	42.500
ENSNBRG00000008223	-	79	40.602	ENSNBRG00000021998	-	64	41.791
ENSNBRG00000008223	-	72	45.000	ENSNBRG00000023091	snai1a	55	39.216
ENSNBRG00000008223	-	94	42.308	ENSNBRG00000008123	-	79	47.727
ENSNBRG00000008223	-	93	46.667	ENSNBRG00000003124	-	94	46.667
ENSNBRG00000008223	-	95	37.705	ENSNBRG00000005805	-	94	43.689
ENSNBRG00000008223	-	91	43.320	ENSNBRG00000004557	-	94	40.828
ENSNBRG00000008223	-	91	39.877	ENSNBRG00000016582	-	87	42.574
ENSNBRG00000008223	-	94	40.523	ENSNBRG00000016282	-	92	48.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008223	-	82	87.456	ENSAPOG00000001563	-	94	80.167	Acanthochromis_polyacanthus
ENSNBRG00000008223	-	70	96.429	ENSACIG00000015411	-	88	83.000	Amphilophus_citrinellus
ENSNBRG00000008223	-	83	87.019	ENSAOCG00000013505	-	64	87.019	Amphiprion_ocellaris
ENSNBRG00000008223	-	94	65.769	ENSAOCG00000013589	-	90	79.661	Amphiprion_ocellaris
ENSNBRG00000008223	-	83	87.019	ENSAPEG00000022756	-	91	87.019	Amphiprion_percula
ENSNBRG00000008223	-	77	88.235	ENSAPEG00000022774	-	84	88.235	Amphiprion_percula
ENSNBRG00000008223	-	77	87.866	ENSATEG00000019284	-	85	88.995	Anabas_testudineus
ENSNBRG00000008223	-	86	79.167	ENSATEG00000019261	-	86	78.974	Anabas_testudineus
ENSNBRG00000008223	-	84	98.844	ENSACLG00000008624	-	94	97.990	Astatotilapia_calliptera
ENSNBRG00000008223	-	91	92.258	ENSACLG00000008606	-	91	95.402	Astatotilapia_calliptera
ENSNBRG00000008223	-	79	88.462	ENSCSEG00000008903	-	87	78.146	Cynoglossus_semilaevis
ENSNBRG00000008223	-	78	82.716	ENSCVAG00000016534	-	53	84.689	Cyprinodon_variegatus
ENSNBRG00000008223	-	77	66.667	ENSGMOG00000000494	-	97	66.667	Gadus_morhua
ENSNBRG00000008223	-	92	77.984	ENSGAFG00000002659	-	71	76.440	Gambusia_affinis
ENSNBRG00000008223	-	83	82.372	ENSGACG00000001377	-	89	91.429	Gasterosteus_aculeatus
ENSNBRG00000008223	-	90	81.070	ENSHBUG00000008502	-	100	80.377	Haplochromis_burtoni
ENSNBRG00000008223	-	82	81.379	ENSHCOG00000000511	-	67	91.304	Hippocampus_comes
ENSNBRG00000008223	-	92	76.554	ENSLBEG00000018509	-	99	79.397	Labrus_bergylta
ENSNBRG00000008223	-	92	78.886	ENSMAMG00000018137	-	95	79.792	Mastacembelus_armatus
ENSNBRG00000008223	-	90	81.481	ENSMZEG00005002583	-	100	80.377	Maylandia_zebra
ENSNBRG00000008223	-	94	65.845	ENSMMOG00000009733	-	89	78.166	Mola_mola
ENSNBRG00000008223	-	80	78.829	ENSMALG00000019991	-	96	78.829	Monopterus_albus
ENSNBRG00000008223	-	85	100.000	ENSONIG00000017233	-	99	100.000	Oreochromis_niloticus
ENSNBRG00000008223	-	82	73.180	ENSOMEG00000016463	-	77	59.639	Oryzias_melastigma
ENSNBRG00000008223	-	77	67.619	ENSPMGG00000002384	-	88	75.214	Periophthalmus_magnuspinnatus
ENSNBRG00000008223	-	82	83.162	ENSPFOG00000006287	-	68	83.162	Poecilia_formosa
ENSNBRG00000008223	-	83	81.221	ENSPLAG00000003412	-	58	82.584	Poecilia_latipinna
ENSNBRG00000008223	-	82	83.162	ENSPMEG00000005897	-	72	75.891	Poecilia_mexicana
ENSNBRG00000008223	-	79	85.714	ENSPREG00000021246	-	92	83.162	Poecilia_reticulata
ENSNBRG00000008223	-	82	99.167	ENSPNYG00000023088	-	100	80.755	Pundamilia_nyererei
ENSNBRG00000008223	-	82	89.726	ENSSDUG00000004892	-	97	57.714	Seriola_dumerili
ENSNBRG00000008223	-	78	83.471	ENSSLDG00000005670	-	91	83.439	Seriola_lalandi_dorsalis
ENSNBRG00000008223	-	90	91.228	ENSSPAG00000022219	-	62	91.228	Stegastes_partitus
ENSNBRG00000008223	-	81	87.018	ENSTNIG00000011188	-	98	87.018	Tetraodon_nigroviridis
ENSNBRG00000008223	-	72	83.036	ENSXCOG00000012645	-	61	66.234	Xiphophorus_couchianus
ENSNBRG00000008223	-	82	82.818	ENSXMAG00000000866	-	54	85.714	Xiphophorus_maculatus