EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000008640 (Gene tree)
Gene ID: -
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA-splicing endonuclease subunit Sen34-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2859 bases
Position: chrJH422547.1:177680-180538
Accession: 102781630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011092	tRNA_int_endo	PF01974.17	7.5e-16	1	1
ENSNBRP00000011102	tRNA_int_endo	PF01974.17	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011403	-	828	-	ENSNBRP00000011092	275 (aa)	-	-
ENSNBRT00000011413	-	987	XM_006809180	ENSNBRP00000011102	328 (aa)	XP_006809243	-

Gene Model

Click here to download ENSNBRG00000008640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008640	tsen34	100	75.887	ENSAPOG00000001248	tsen34	95	75.089	Acanthochromis_polyacanthus
ENSNBRG00000008640	tsen34	94	76.226	ENSAPOG00000008579	-	95	75.379	Acanthochromis_polyacanthus
ENSNBRG00000008640	tsen34	94	75.862	ENSAPOG00000012557	-	87	75.000	Acanthochromis_polyacanthus
ENSNBRG00000008640	tsen34	98	77.122	ENSACIG00000007110	tsen34	92	75.175	Amphilophus_citrinellus
ENSNBRG00000008640	tsen34	100	76.241	ENSAOCG00000006905	tsen34	95	75.445	Amphiprion_ocellaris
ENSNBRG00000008640	tsen34	100	75.887	ENSAPEG00000019171	tsen34	95	75.089	Amphiprion_percula
ENSNBRG00000008640	tsen34	98	72.993	ENSATEG00000019800	tsen34	99	71.777	Anabas_testudineus
ENSNBRG00000008640	tsen34	98	38.782	ENSACAG00000016189	TSEN34	99	38.608	Anolis_carolinensis
ENSNBRG00000008640	tsen34	98	90.335	ENSACLG00000009661	tsen34	98	88.581	Astatotilapia_calliptera
ENSNBRG00000008640	tsen34	98	54.710	ENSAMXG00000017568	tsen34	90	53.659	Astyanax_mexicanus
ENSNBRG00000008640	tsen34	99	37.500	ENSCJAG00000001128	TSEN34	99	39.865	Callithrix_jacchus
ENSNBRG00000008640	tsen34	50	48.921	ENSCAPG00000012811	-	67	50.000	Cavia_aperea
ENSNBRG00000008640	tsen34	97	68.231	ENSCSEG00000006278	tsen34	99	62.229	Cynoglossus_semilaevis
ENSNBRG00000008640	tsen34	98	54.945	ENSDARG00000061370	tsen34	89	54.874	Danio_rerio
ENSNBRG00000008640	tsen34	99	35.443	ENSDNOG00000039332	TSEN34	99	35.714	Dasypus_novemcinctus
ENSNBRG00000008640	tsen34	99	56.383	ENSELUG00000006262	tsen34	92	56.842	Esox_lucius
ENSNBRG00000008640	tsen34	57	45.223	ENSFDAG00000017995	TSEN34	62	45.223	Fukomys_damarensis
ENSNBRG00000008640	tsen34	98	72.563	ENSFHEG00000008791	tsen34	95	72.318	Fundulus_heteroclitus
ENSNBRG00000008640	tsen34	68	69.519	ENSGMOG00000001961	tsen34	86	69.318	Gadus_morhua
ENSNBRG00000008640	tsen34	98	73.801	ENSGAFG00000016880	tsen34	97	72.085	Gambusia_affinis
ENSNBRG00000008640	tsen34	98	68.385	ENSGACG00000004800	tsen34	100	67.119	Gasterosteus_aculeatus
ENSNBRG00000008640	tsen34	99	42.321	ENSGAGG00000008982	TSEN34	73	42.321	Gopherus_agassizii
ENSNBRG00000008640	tsen34	99	37.987	ENSGGOG00000008197	TSEN34	99	37.987	Gorilla_gorilla
ENSNBRG00000008640	tsen34	98	92.565	ENSHBUG00000016593	tsen34	86	90.780	Haplochromis_burtoni
ENSNBRG00000008640	tsen34	50	49.640	ENSHGLG00100008719	TSEN34	51	49.640	Heterocephalus_glaber_male
ENSNBRG00000008640	tsen34	97	57.246	ENSHCOG00000001368	tsen34	98	50.667	Hippocampus_comes
ENSNBRG00000008640	tsen34	98	52.128	ENSIPUG00000008359	tsen34	92	50.000	Ictalurus_punctatus
ENSNBRG00000008640	tsen34	100	73.214	ENSKMAG00000007181	tsen34	87	75.269	Kryptolebias_marmoratus
ENSNBRG00000008640	tsen34	98	73.162	ENSLBEG00000015001	tsen34	95	72.101	Labrus_bergylta
ENSNBRG00000008640	tsen34	98	55.839	ENSLOCG00000001887	tsen34	99	55.396	Lepisosteus_oculatus
ENSNBRG00000008640	tsen34	98	73.358	ENSMAMG00000018407	tsen34	94	74.088	Mastacembelus_armatus
ENSNBRG00000008640	tsen34	98	92.937	ENSMZEG00005002313	tsen34	96	91.135	Maylandia_zebra
ENSNBRG00000008640	tsen34	98	70.447	ENSMMOG00000009551	tsen34	94	68.726	Mola_mola
ENSNBRG00000008640	tsen34	98	70.803	ENSMALG00000018918	tsen34	97	69.123	Monopterus_albus
ENSNBRG00000008640	tsen34	99	36.991	ENSMUSG00000035585	Tsen34	80	51.724	Mus_musculus
ENSNBRG00000008640	tsen34	95	44.151	ENSMEUG00000002978	TSEN34	96	44.151	Notamacropus_eugenii
ENSNBRG00000008640	tsen34	98	91.078	ENSONIG00000017253	tsen34	100	90.182	Oreochromis_niloticus
ENSNBRG00000008640	tsen34	97	68.266	ENSORLG00015012740	tsen34	96	67.266	Oryzias_latipes_hsok
ENSNBRG00000008640	tsen34	98	66.543	ENSOMEG00000016771	tsen34	95	69.784	Oryzias_melastigma
ENSNBRG00000008640	tsen34	91	36.519	ENSOARG00000002763	TSEN34	97	36.519	Ovis_aries
ENSNBRG00000008640	tsen34	98	56.985	ENSPKIG00000014674	tsen34	93	56.522	Paramormyrops_kingsleyae
ENSNBRG00000008640	tsen34	98	72.325	ENSPFOG00000008679	tsen34	97	71.025	Poecilia_formosa
ENSNBRG00000008640	tsen34	98	74.908	ENSPLAG00000017309	tsen34	97	73.264	Poecilia_latipinna
ENSNBRG00000008640	tsen34	98	72.325	ENSPMEG00000005235	tsen34	97	71.025	Poecilia_mexicana
ENSNBRG00000008640	tsen34	98	71.587	ENSPREG00000021784	tsen34	97	70.526	Poecilia_reticulata
ENSNBRG00000008640	tsen34	98	92.193	ENSPNYG00000024090	tsen34	75	90.426	Pundamilia_nyererei
ENSNBRG00000008640	tsen34	98	53.929	ENSPNAG00000028698	tsen34	88	53.103	Pygocentrus_nattereri
ENSNBRG00000008640	tsen34	69	57.143	ENSSFOG00015017579	tsen34	82	57.143	Scleropages_formosus
ENSNBRG00000008640	tsen34	98	67.636	ENSSMAG00000005214	tsen34	99	64.931	Scophthalmus_maximus
ENSNBRG00000008640	tsen34	98	73.022	ENSSDUG00000005391	tsen34	97	70.134	Seriola_dumerili
ENSNBRG00000008640	tsen34	98	73.022	ENSSLDG00000006144	tsen34	94	70.134	Seriola_lalandi_dorsalis
ENSNBRG00000008640	tsen34	85	35.036	ENSSARG00000005857	TSEN34	72	35.036	Sorex_araneus
ENSNBRG00000008640	tsen34	98	41.463	ENSSPUG00000008447	TSEN34	98	41.463	Sphenodon_punctatus
ENSNBRG00000008640	tsen34	97	76.753	ENSSPAG00000010512	tsen34	93	75.000	Stegastes_partitus
ENSNBRG00000008640	tsen34	97	62.454	ENSTRUG00000000787	tsen34	95	60.900	Takifugu_rubripes
ENSNBRG00000008640	tsen34	98	63.051	ENSTNIG00000011201	tsen34	100	64.145	Tetraodon_nigroviridis
ENSNBRG00000008640	tsen34	98	63.103	ENSTNIG00000001937	-	100	63.880	Tetraodon_nigroviridis
ENSNBRG00000008640	tsen34	98	40.067	ENSXETG00000004597	tsen34	99	38.835	Xenopus_tropicalis
ENSNBRG00000008640	tsen34	98	72.325	ENSXMAG00000024266	tsen34	93	72.325	Xiphophorus_maculatus