EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000008652 (Gene tree)
Gene ID: 102785194
Gene Symbol: twistnb
Alias: -
Full Name: DNA-directed RNA polymerase I subunit RPA43-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4222 bases
Position: chrJH422285.1:2855592-2859813
Accession: 102785194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011091	SHS2_Rpb7-N	PF03876.17	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011402	-	2359	XM_006787691	ENSNBRP00000011091	374 (aa)	XP_006787754	-

Gene Model

Click here to download ENSNBRG00000008652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008652	twistnb	92	42.286	ENSG00000105849	TWISTNB	91	42.154	Homo_sapiens
ENSNBRG00000008652	twistnb	100	69.191	ENSAPOG00000011796	twistnb	95	69.780	Acanthochromis_polyacanthus
ENSNBRG00000008652	twistnb	56	53.589	ENSAMEG00000008558	TWISTNB	53	53.589	Ailuropoda_melanoleuca
ENSNBRG00000008652	twistnb	97	77.174	ENSACIG00000020400	twistnb	96	75.487	Amphilophus_citrinellus
ENSNBRG00000008652	twistnb	96	69.293	ENSAOCG00000024200	twistnb	95	69.231	Amphiprion_ocellaris
ENSNBRG00000008652	twistnb	96	69.837	ENSAPEG00000016750	twistnb	95	69.780	Amphiprion_percula
ENSNBRG00000008652	twistnb	94	69.167	ENSATEG00000017956	twistnb	95	67.318	Anabas_testudineus
ENSNBRG00000008652	twistnb	50	52.128	ENSACAG00000011817	TWISTNB	94	52.128	Anolis_carolinensis
ENSNBRG00000008652	twistnb	83	44.237	ENSANAG00000026418	TWISTNB	92	42.216	Aotus_nancymaae
ENSNBRG00000008652	twistnb	100	97.340	ENSACLG00000022280	twistnb	94	97.340	Astatotilapia_calliptera
ENSNBRG00000008652	twistnb	54	57.921	ENSAMXG00000035868	twistnb	60	58.883	Astyanax_mexicanus
ENSNBRG00000008652	twistnb	91	44.669	ENSBTAG00000006721	TWISTNB	91	45.679	Bos_taurus
ENSNBRG00000008652	twistnb	83	45.886	ENSCJAG00000001148	TWISTNB	59	54.774	Callithrix_jacchus
ENSNBRG00000008652	twistnb	53	55.556	ENSCAFG00000002511	TWISTNB	91	43.210	Canis_familiaris
ENSNBRG00000008652	twistnb	53	55.556	ENSCAFG00020002140	TWISTNB	85	44.923	Canis_lupus_dingo
ENSNBRG00000008652	twistnb	83	47.531	ENSCHIG00000024078	TWISTNB	91	43.976	Capra_hircus
ENSNBRG00000008652	twistnb	82	46.708	ENSTSYG00000001471	TWISTNB	92	42.730	Carlito_syrichta
ENSNBRG00000008652	twistnb	88	47.006	ENSCPOG00000031651	TWISTNB	57	54.872	Cavia_porcellus
ENSNBRG00000008652	twistnb	52	55.155	ENSCCAG00000026416	TWISTNB	57	55.155	Cebus_capucinus
ENSNBRG00000008652	twistnb	52	54.315	ENSCATG00000035621	TWISTNB	59	53.769	Cercocebus_atys
ENSNBRG00000008652	twistnb	91	47.262	ENSCLAG00000012696	TWISTNB	58	55.612	Chinchilla_lanigera
ENSNBRG00000008652	twistnb	52	54.315	ENSCSAG00000013544	TWISTNB	59	53.769	Chlorocebus_sabaeus
ENSNBRG00000008652	twistnb	92	44.034	ENSCPBG00000000367	TWISTNB	59	55.102	Chrysemys_picta_bellii
ENSNBRG00000008652	twistnb	89	44.048	ENSCANG00000038759	TWISTNB	55	56.216	Colobus_angolensis_palliatus
ENSNBRG00000008652	twistnb	52	55.440	ENSCGRG00001000499	Twistnb	59	55.440	Cricetulus_griseus_chok1gshd
ENSNBRG00000008652	twistnb	93	57.065	ENSCVAG00000014324	twistnb	95	56.510	Cyprinodon_variegatus
ENSNBRG00000008652	twistnb	54	59.701	ENSDARG00000024416	twistnb	51	59.701	Danio_rerio
ENSNBRG00000008652	twistnb	52	56.122	ENSDNOG00000006438	-	91	43.963	Dasypus_novemcinctus
ENSNBRG00000008652	twistnb	80	46.689	ENSDORG00000007795	Twistnb	57	55.676	Dipodomys_ordii
ENSNBRG00000008652	twistnb	94	43.611	ENSEASG00005021702	TWISTNB	65	51.965	Equus_asinus_asinus
ENSNBRG00000008652	twistnb	55	54.589	ENSECAG00000014563	TWISTNB	91	43.553	Equus_caballus
ENSNBRG00000008652	twistnb	98	53.639	ENSELUG00000000098	TWISTNB	96	52.632	Esox_lucius
ENSNBRG00000008652	twistnb	52	55.102	ENSFCAG00000025987	TWISTNB	59	55.102	Felis_catus
ENSNBRG00000008652	twistnb	96	59.116	ENSFHEG00000013318	twistnb	95	58.239	Fundulus_heteroclitus
ENSNBRG00000008652	twistnb	94	57.808	ENSGAFG00000018309	twistnb	95	57.303	Gambusia_affinis
ENSNBRG00000008652	twistnb	67	69.200	ENSGACG00000006425	twistnb	91	69.512	Gasterosteus_aculeatus
ENSNBRG00000008652	twistnb	52	54.592	ENSGGOG00000026888	TWISTNB	59	53.769	Gorilla_gorilla
ENSNBRG00000008652	twistnb	100	96.809	ENSHBUG00000020155	twistnb	94	96.809	Haplochromis_burtoni
ENSNBRG00000008652	twistnb	89	47.181	ENSHGLG00000010976	TWISTNB	55	57.297	Heterocephalus_glaber_female
ENSNBRG00000008652	twistnb	83	48.254	ENSHGLG00100005410	TWISTNB	55	57.297	Heterocephalus_glaber_male
ENSNBRG00000008652	twistnb	95	54.135	ENSHCOG00000010590	twistnb	96	53.769	Hippocampus_comes
ENSNBRG00000008652	twistnb	98	48.936	ENSIPUG00000004117	twistnb	95	49.573	Ictalurus_punctatus
ENSNBRG00000008652	twistnb	55	53.365	ENSSTOG00000022702	TWISTNB	56	53.365	Ictidomys_tridecemlineatus
ENSNBRG00000008652	twistnb	52	53.368	ENSJJAG00000015887	Twistnb	60	53.368	Jaculus_jaculus
ENSNBRG00000008652	twistnb	100	59.151	ENSKMAG00000001591	twistnb	100	57.825	Kryptolebias_marmoratus
ENSNBRG00000008652	twistnb	100	65.885	ENSLBEG00000024225	twistnb	95	66.022	Labrus_bergylta
ENSNBRG00000008652	twistnb	98	45.405	ENSLACG00000010508	TWISTNB	61	54.955	Latimeria_chalumnae
ENSNBRG00000008652	twistnb	52	59.596	ENSLOCG00000011399	twistnb	60	59.596	Lepisosteus_oculatus
ENSNBRG00000008652	twistnb	52	56.701	ENSLAFG00000008755	TWISTNB	65	53.881	Loxodonta_africana
ENSNBRG00000008652	twistnb	92	41.880	ENSMFAG00000045328	TWISTNB	91	42.462	Macaca_fascicularis
ENSNBRG00000008652	twistnb	52	53.807	ENSMMUG00000009609	TWISTNB	91	42.462	Macaca_mulatta
ENSNBRG00000008652	twistnb	92	41.595	ENSMNEG00000041159	TWISTNB	91	42.154	Macaca_nemestrina
ENSNBRG00000008652	twistnb	52	54.315	ENSMLEG00000042783	TWISTNB	59	53.769	Mandrillus_leucophaeus
ENSNBRG00000008652	twistnb	100	97.340	ENSMZEG00005007561	twistnb	94	97.340	Maylandia_zebra
ENSNBRG00000008652	twistnb	89	42.773	ENSMICG00000036489	TWISTNB	89	42.994	Microcebus_murinus
ENSNBRG00000008652	twistnb	78	47.811	ENSMOCG00000003458	Twistnb	59	58.115	Microtus_ochrogaster
ENSNBRG00000008652	twistnb	100	59.033	ENSMMOG00000020085	twistnb	95	58.289	Mola_mola
ENSNBRG00000008652	twistnb	95	59.043	ENSMALG00000016407	twistnb	95	57.447	Monopterus_albus
ENSNBRG00000008652	twistnb	52	55.959	MGP_CAROLIEiJ_G0017692	Twistnb	58	55.959	Mus_caroli
ENSNBRG00000008652	twistnb	52	55.440	ENSMUSG00000020561	Twistnb	58	55.440	Mus_musculus
ENSNBRG00000008652	twistnb	52	54.404	MGP_PahariEiJ_G0029450	Twistnb	60	54.040	Mus_pahari
ENSNBRG00000008652	twistnb	52	55.440	MGP_SPRETEiJ_G0018534	Twistnb	58	55.440	Mus_spretus
ENSNBRG00000008652	twistnb	52	56.633	ENSMPUG00000013948	TWISTNB	58	54.067	Mustela_putorius_furo
ENSNBRG00000008652	twistnb	89	41.964	ENSNLEG00000035755	TWISTNB	54	56.354	Nomascus_leucogenys
ENSNBRG00000008652	twistnb	78	45.695	ENSOPRG00000016109	TWISTNB	87	43.038	Ochotona_princeps
ENSNBRG00000008652	twistnb	91	47.826	ENSODEG00000007222	TWISTNB	91	46.106	Octodon_degus
ENSNBRG00000008652	twistnb	96	66.022	ENSORLG00000004005	twistnb	85	66.111	Oryzias_latipes
ENSNBRG00000008652	twistnb	100	65.252	ENSORLG00020002579	twistnb	100	64.908	Oryzias_latipes_hni
ENSNBRG00000008652	twistnb	100	64.987	ENSORLG00015013403	twistnb	89	64.908	Oryzias_latipes_hsok
ENSNBRG00000008652	twistnb	55	51.942	ENSOGAG00000009189	TWISTNB	88	43.038	Otolemur_garnettii
ENSNBRG00000008652	twistnb	83	46.226	ENSOARG00000009803	TWISTNB	90	44.954	Ovis_aries
ENSNBRG00000008652	twistnb	92	42.000	ENSPPAG00000034623	TWISTNB	59	53.769	Pan_paniscus
ENSNBRG00000008652	twistnb	83	44.272	ENSPPRG00000005877	TWISTNB	59	55.102	Panthera_pardus
ENSNBRG00000008652	twistnb	52	54.592	ENSPTRG00000018962	TWISTNB	59	53.769	Pan_troglodytes
ENSNBRG00000008652	twistnb	52	54.315	ENSPANG00000015736	TWISTNB	91	42.462	Papio_anubis
ENSNBRG00000008652	twistnb	79	48.837	ENSPKIG00000025635	twistnb	68	51.984	Paramormyrops_kingsleyae
ENSNBRG00000008652	twistnb	95	63.686	ENSPMGG00000019023	twistnb	94	62.500	Periophthalmus_magnuspinnatus
ENSNBRG00000008652	twistnb	80	43.506	ENSPCIG00000017456	TWISTNB	55	54.645	Phascolarctos_cinereus
ENSNBRG00000008652	twistnb	55	53.398	ENSPPYG00000017752	TWISTNB	60	53.398	Pongo_abelii
ENSNBRG00000008652	twistnb	100	97.074	ENSPNYG00000002674	twistnb	100	97.074	Pundamilia_nyererei
ENSNBRG00000008652	twistnb	93	40.811	ENSPNAG00000011956	twistnb	59	52.466	Pygocentrus_nattereri
ENSNBRG00000008652	twistnb	52	55.959	ENSRNOG00000010750	Twistnb	60	55.959	Rattus_norvegicus
ENSNBRG00000008652	twistnb	89	44.048	ENSRBIG00000043007	TWISTNB	54	56.216	Rhinopithecus_bieti
ENSNBRG00000008652	twistnb	89	44.048	ENSRROG00000040155	TWISTNB	55	56.216	Rhinopithecus_roxellana
ENSNBRG00000008652	twistnb	52	54.822	ENSSBOG00000023188	TWISTNB	59	54.271	Saimiri_boliviensis_boliviensis
ENSNBRG00000008652	twistnb	52	55.897	ENSSFOG00015012788	twistnb	59	57.672	Scleropages_formosus
ENSNBRG00000008652	twistnb	100	65.344	ENSSMAG00000012792	twistnb	100	65.079	Scophthalmus_maximus
ENSNBRG00000008652	twistnb	100	67.885	ENSSDUG00000007038	twistnb	95	68.132	Seriola_dumerili
ENSNBRG00000008652	twistnb	87	37.690	ENSSPUG00000007595	TWISTNB	61	49.231	Sphenodon_punctatus
ENSNBRG00000008652	twistnb	94	66.944	ENSSPAG00000005871	twistnb	100	66.667	Stegastes_partitus
ENSNBRG00000008652	twistnb	86	44.643	ENSSSCG00000025298	TWISTNB	65	52.727	Sus_scrofa
ENSNBRG00000008652	twistnb	90	58.160	ENSTNIG00000017778	twistnb	97	58.788	Tetraodon_nigroviridis
ENSNBRG00000008652	twistnb	52	55.155	ENSTBEG00000003554	TWISTNB	90	42.025	Tupaia_belangeri
ENSNBRG00000008652	twistnb	52	55.612	ENSUAMG00000017593	TWISTNB	58	55.612	Ursus_americanus
ENSNBRG00000008652	twistnb	52	55.102	ENSUMAG00000022203	TWISTNB	58	55.102	Ursus_maritimus
ENSNBRG00000008652	twistnb	53	56.061	ENSVVUG00000008386	TWISTNB	92	45.679	Vulpes_vulpes
ENSNBRG00000008652	twistnb	94	61.433	ENSXCOG00000020199	twistnb	69	72.619	Xiphophorus_couchianus