EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000008739 (Gene tree)
Gene ID: 102785017
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6474 bases
Position: chrJH422301.1:3896928-3903401
Accession: 102785017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011192	RNase_H	PF00075.24	1.1e-41	1	1
ENSNBRP00000011207	RNase_H	PF00075.24	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011527	-	1867	XM_006793504	ENSNBRP00000011207	309 (aa)	XP_006793567	UPI0003EC637E
ENSNBRT00000011512	-	1964	XM_006793503	ENSNBRP00000011192	309 (aa)	XP_006793566	UPI0003EC637E

Gene Model

Click here to download ENSNBRG00000008739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008739	rnaseh1	87	55.556	ENSG00000171865	RNASEH1	89	55.185	Homo_sapiens
ENSNBRG00000008739	rnaseh1	99	79.412	ENSAPOG00000000412	rnaseh1	100	79.412	Acanthochromis_polyacanthus
ENSNBRG00000008739	rnaseh1	87	54.074	ENSAMEG00000018433	RNASEH1	98	50.842	Ailuropoda_melanoleuca
ENSNBRG00000008739	rnaseh1	99	87.987	ENSACIG00000014666	rnaseh1	99	87.987	Amphilophus_citrinellus
ENSNBRG00000008739	rnaseh1	98	82.178	ENSAOCG00000015210	rnaseh1	99	81.848	Amphiprion_ocellaris
ENSNBRG00000008739	rnaseh1	98	82.178	ENSAPEG00000014104	rnaseh1	99	81.848	Amphiprion_percula
ENSNBRG00000008739	rnaseh1	99	81.433	ENSATEG00000000598	rnaseh1	99	81.119	Anabas_testudineus
ENSNBRG00000008739	rnaseh1	83	52.091	ENSAPLG00000001961	RNASEH1	100	52.308	Anas_platyrhynchos
ENSNBRG00000008739	rnaseh1	87	50.167	ENSACAG00000016857	rnaseh1	91	48.173	Anolis_carolinensis
ENSNBRG00000008739	rnaseh1	87	55.556	ENSANAG00000024055	RNASEH1	89	55.597	Aotus_nancymaae
ENSNBRG00000008739	rnaseh1	100	98.382	ENSACLG00000006741	rnaseh1	100	98.382	Astatotilapia_calliptera
ENSNBRG00000008739	rnaseh1	95	53.041	ENSAMXG00000042940	rnaseh1	97	57.040	Astyanax_mexicanus
ENSNBRG00000008739	rnaseh1	96	53.199	ENSBTAG00000016235	RNASEH1	99	50.968	Bos_taurus
ENSNBRG00000008739	rnaseh1	88	36.630	WBGene00004382	rnh-1.0	97	36.630	Caenorhabditis_elegans
ENSNBRG00000008739	rnaseh1	87	53.261	ENSCJAG00000035450	RNASEH1	89	53.285	Callithrix_jacchus
ENSNBRG00000008739	rnaseh1	94	52.492	ENSCAFG00000003259	RNASEH1	98	51.667	Canis_familiaris
ENSNBRG00000008739	rnaseh1	96	53.512	ENSCHIG00000022264	-	99	52.843	Capra_hircus
ENSNBRG00000008739	rnaseh1	81	45.817	ENSCHIG00000022230	-	99	45.020	Capra_hircus
ENSNBRG00000008739	rnaseh1	88	53.650	ENSTSYG00000012926	RNASEH1	89	53.137	Carlito_syrichta
ENSNBRG00000008739	rnaseh1	82	55.906	ENSCAPG00000004813	RNASEH1	99	54.331	Cavia_aperea
ENSNBRG00000008739	rnaseh1	88	56.089	ENSCPOG00000022278	Rnaseh1	87	54.613	Cavia_porcellus
ENSNBRG00000008739	rnaseh1	87	55.109	ENSCCAG00000038017	RNASEH1	89	55.109	Cebus_capucinus
ENSNBRG00000008739	rnaseh1	87	49.627	ENSCATG00000016818	-	89	49.077	Cercocebus_atys
ENSNBRG00000008739	rnaseh1	87	54.444	ENSCATG00000016515	-	89	54.074	Cercocebus_atys
ENSNBRG00000008739	rnaseh1	93	53.472	ENSCLAG00000002440	RNASEH1	89	55.970	Chinchilla_lanigera
ENSNBRG00000008739	rnaseh1	87	54.815	ENSCSAG00000006943	RNASEH1	89	54.074	Chlorocebus_sabaeus
ENSNBRG00000008739	rnaseh1	54	62.941	ENSCHOG00000008547	RNASEH1	74	68.212	Choloepus_hoffmanni
ENSNBRG00000008739	rnaseh1	90	53.873	ENSCPBG00000021620	RNASEH1	99	54.815	Chrysemys_picta_bellii
ENSNBRG00000008739	rnaseh1	88	37.410	ENSCING00000014054	-	93	37.410	Ciona_intestinalis
ENSNBRG00000008739	rnaseh1	74	38.462	ENSCSAVG00000000009	-	96	37.657	Ciona_savignyi
ENSNBRG00000008739	rnaseh1	87	55.556	ENSCANG00000037763	RNASEH1	89	55.556	Colobus_angolensis_palliatus
ENSNBRG00000008739	rnaseh1	87	54.478	ENSCGRG00001008950	Rnaseh1	89	54.851	Cricetulus_griseus_chok1gshd
ENSNBRG00000008739	rnaseh1	87	54.478	ENSCGRG00000006029	Rnaseh1	89	54.851	Cricetulus_griseus_crigri
ENSNBRG00000008739	rnaseh1	99	67.937	ENSCSEG00000005741	rnaseh1	97	68.571	Cynoglossus_semilaevis
ENSNBRG00000008739	rnaseh1	97	75.667	ENSCVAG00000018717	rnaseh1	98	75.000	Cyprinodon_variegatus
ENSNBRG00000008739	rnaseh1	89	66.065	ENSDARG00000042571	rnaseh1	98	65.704	Danio_rerio
ENSNBRG00000008739	rnaseh1	93	52.577	ENSDNOG00000016056	RNASEH1	94	53.103	Dasypus_novemcinctus
ENSNBRG00000008739	rnaseh1	87	54.613	ENSDORG00000000704	Rnaseh1	89	54.412	Dipodomys_ordii
ENSNBRG00000008739	rnaseh1	87	38.276	FBgn0023171	rnh1	92	38.276	Drosophila_melanogaster
ENSNBRG00000008739	rnaseh1	87	52.381	ENSETEG00000012674	RNASEH1	89	52.206	Echinops_telfairi
ENSNBRG00000008739	rnaseh1	87	45.185	ENSEBUG00000006116	rnaseh1	78	44.118	Eptatretus_burgeri
ENSNBRG00000008739	rnaseh1	88	45.946	ENSEBUG00000008898	rnaseh1	99	45.270	Eptatretus_burgeri
ENSNBRG00000008739	rnaseh1	95	54.545	ENSEASG00005022200	RNASEH1	97	52.862	Equus_asinus_asinus
ENSNBRG00000008739	rnaseh1	95	54.545	ENSECAG00000020695	RNASEH1	97	52.862	Equus_caballus
ENSNBRG00000008739	rnaseh1	96	70.234	ENSELUG00000010112	rnaseh1	99	69.565	Esox_lucius
ENSNBRG00000008739	rnaseh1	94	52.881	ENSFCAG00000025832	RNASEH1	98	52.542	Felis_catus
ENSNBRG00000008739	rnaseh1	88	56.890	ENSFALG00000002069	RNASEH1	93	56.890	Ficedula_albicollis
ENSNBRG00000008739	rnaseh1	95	51.852	ENSFDAG00000002035	RNASEH1	79	54.104	Fukomys_damarensis
ENSNBRG00000008739	rnaseh1	96	71.044	ENSGMOG00000013818	rnaseh1	99	70.370	Gadus_morhua
ENSNBRG00000008739	rnaseh1	88	55.147	ENSGALG00000016389	RNASEH1	93	55.147	Gallus_gallus
ENSNBRG00000008739	rnaseh1	96	71.667	ENSGAFG00000001776	rnaseh1	99	71.717	Gambusia_affinis
ENSNBRG00000008739	rnaseh1	96	80.872	ENSGACG00000011935	rnaseh1	98	80.201	Gasterosteus_aculeatus
ENSNBRG00000008739	rnaseh1	87	56.159	ENSGAGG00000009150	RNASEH1	61	55.797	Gopherus_agassizii
ENSNBRG00000008739	rnaseh1	87	55.597	ENSGGOG00000034822	RNASEH1	89	55.224	Gorilla_gorilla
ENSNBRG00000008739	rnaseh1	100	96.764	ENSHBUG00000004666	rnaseh1	100	96.764	Haplochromis_burtoni
ENSNBRG00000008739	rnaseh1	87	54.104	ENSHGLG00000002585	Rnaseh1	82	52.985	Heterocephalus_glaber_female
ENSNBRG00000008739	rnaseh1	87	54.104	ENSHGLG00100005105	Rnaseh1	82	52.985	Heterocephalus_glaber_male
ENSNBRG00000008739	rnaseh1	98	72.313	ENSHCOG00000012329	rnaseh1	100	72.313	Hippocampus_comes
ENSNBRG00000008739	rnaseh1	96	57.525	ENSIPUG00000023060	rnaseh1	98	59.636	Ictalurus_punctatus
ENSNBRG00000008739	rnaseh1	87	55.556	ENSSTOG00000012774	RNASEH1	91	55.556	Ictidomys_tridecemlineatus
ENSNBRG00000008739	rnaseh1	85	44.697	ENSJJAG00000008994	-	89	43.182	Jaculus_jaculus
ENSNBRG00000008739	rnaseh1	87	50.000	ENSJJAG00000021481	-	89	49.259	Jaculus_jaculus
ENSNBRG00000008739	rnaseh1	79	52.653	ENSJJAG00000020238	Rnaseh1	90	51.837	Jaculus_jaculus
ENSNBRG00000008739	rnaseh1	97	73.913	ENSKMAG00000001373	rnaseh1	98	73.913	Kryptolebias_marmoratus
ENSNBRG00000008739	rnaseh1	100	73.226	ENSLBEG00000004480	rnaseh1	97	77.899	Labrus_bergylta
ENSNBRG00000008739	rnaseh1	89	55.714	ENSLACG00000007100	RNASEH1	90	55.714	Latimeria_chalumnae
ENSNBRG00000008739	rnaseh1	90	61.566	ENSLOCG00000017212	rnaseh1	100	61.972	Lepisosteus_oculatus
ENSNBRG00000008739	rnaseh1	87	56.296	ENSLAFG00000015091	RNASEH1	89	54.444	Loxodonta_africana
ENSNBRG00000008739	rnaseh1	87	54.815	ENSMFAG00000000063	-	89	54.074	Macaca_fascicularis
ENSNBRG00000008739	rnaseh1	87	50.746	ENSMFAG00000002323	-	89	50.373	Macaca_fascicularis
ENSNBRG00000008739	rnaseh1	87	50.746	ENSMMUG00000019280	-	89	50.000	Macaca_mulatta
ENSNBRG00000008739	rnaseh1	87	55.185	ENSMNEG00000040183	-	89	54.444	Macaca_nemestrina
ENSNBRG00000008739	rnaseh1	87	50.373	ENSMNEG00000029676	-	89	50.000	Macaca_nemestrina
ENSNBRG00000008739	rnaseh1	81	54.545	ENSMLEG00000039352	-	98	54.545	Mandrillus_leucophaeus
ENSNBRG00000008739	rnaseh1	87	51.866	ENSMLEG00000028662	-	89	51.493	Mandrillus_leucophaeus
ENSNBRG00000008739	rnaseh1	99	78.827	ENSMAMG00000019725	rnaseh1	99	78.671	Mastacembelus_armatus
ENSNBRG00000008739	rnaseh1	100	98.382	ENSMZEG00005013006	rnaseh1	100	98.382	Maylandia_zebra
ENSNBRG00000008739	rnaseh1	78	55.556	ENSMGAG00000013979	RNASEH1	99	55.556	Meleagris_gallopavo
ENSNBRG00000008739	rnaseh1	87	54.579	ENSMAUG00000014957	Rnaseh1	89	54.613	Mesocricetus_auratus
ENSNBRG00000008739	rnaseh1	87	54.945	ENSMICG00000033156	RNASEH1	88	55.147	Microcebus_murinus
ENSNBRG00000008739	rnaseh1	87	54.480	ENSMOCG00000015522	Rnaseh1	89	54.579	Microtus_ochrogaster
ENSNBRG00000008739	rnaseh1	95	77.891	ENSMMOG00000015902	rnaseh1	96	77.551	Mola_mola
ENSNBRG00000008739	rnaseh1	87	55.185	ENSMODG00000014491	-	89	55.185	Monodelphis_domestica
ENSNBRG00000008739	rnaseh1	77	50.628	ENSMODG00000028814	-	91	51.667	Monodelphis_domestica
ENSNBRG00000008739	rnaseh1	97	80.464	ENSMALG00000010565	rnaseh1	99	79.801	Monopterus_albus
ENSNBRG00000008739	rnaseh1	87	55.597	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	55.224	Mus_caroli
ENSNBRG00000008739	rnaseh1	87	55.970	ENSMUSG00000020630	Rnaseh1	89	55.597	Mus_musculus
ENSNBRG00000008739	rnaseh1	87	54.851	MGP_PahariEiJ_G0029418	Rnaseh1	89	55.597	Mus_pahari
ENSNBRG00000008739	rnaseh1	87	55.970	MGP_SPRETEiJ_G0018502	Rnaseh1	89	55.224	Mus_spretus
ENSNBRG00000008739	rnaseh1	87	56.777	ENSNGAG00000015966	Rnaseh1	84	56.296	Nannospalax_galili
ENSNBRG00000008739	rnaseh1	80	48.387	ENSNLEG00000000059	-	88	47.984	Nomascus_leucogenys
ENSNBRG00000008739	rnaseh1	87	49.630	ENSNLEG00000015400	RNASEH1	87	48.889	Nomascus_leucogenys
ENSNBRG00000008739	rnaseh1	87	37.132	ENSMEUG00000003610	-	90	36.296	Notamacropus_eugenii
ENSNBRG00000008739	rnaseh1	88	53.137	ENSOPRG00000005072	RNASEH1	90	52.708	Ochotona_princeps
ENSNBRG00000008739	rnaseh1	91	54.895	ENSODEG00000000235	Rnaseh1	92	54.196	Octodon_degus
ENSNBRG00000008739	rnaseh1	90	96.403	ENSONIG00000018697	rnaseh1	100	96.403	Oreochromis_niloticus
ENSNBRG00000008739	rnaseh1	87	54.815	ENSOCUG00000006117	RNASEH1	95	52.055	Oryctolagus_cuniculus
ENSNBRG00000008739	rnaseh1	92	75.088	ENSORLG00000018127	rnaseh1	97	75.180	Oryzias_latipes
ENSNBRG00000008739	rnaseh1	99	73.941	ENSORLG00020013660	rnaseh1	99	72.964	Oryzias_latipes_hni
ENSNBRG00000008739	rnaseh1	99	72.964	ENSORLG00015011338	rnaseh1	99	72.964	Oryzias_latipes_hsok
ENSNBRG00000008739	rnaseh1	88	72.059	ENSOMEG00000004710	rnaseh1	99	71.324	Oryzias_melastigma
ENSNBRG00000008739	rnaseh1	95	51.351	ENSOGAG00000017176	RNASEH1	98	51.351	Otolemur_garnettii
ENSNBRG00000008739	rnaseh1	96	46.580	ENSOARG00000005386	RNASEH1	99	46.254	Ovis_aries
ENSNBRG00000008739	rnaseh1	87	55.556	ENSPPAG00000034221	RNASEH1	89	55.185	Pan_paniscus
ENSNBRG00000008739	rnaseh1	94	52.542	ENSPPRG00000015513	RNASEH1	98	52.203	Panthera_pardus
ENSNBRG00000008739	rnaseh1	81	55.600	ENSPTIG00000019034	RNASEH1	83	55.200	Panthera_tigris_altaica
ENSNBRG00000008739	rnaseh1	87	55.556	ENSPTRG00000011614	RNASEH1	89	55.185	Pan_troglodytes
ENSNBRG00000008739	rnaseh1	88	45.878	ENSPTRG00000043403	-	97	46.595	Pan_troglodytes
ENSNBRG00000008739	rnaseh1	87	50.000	ENSPANG00000018246	-	88	49.627	Papio_anubis
ENSNBRG00000008739	rnaseh1	87	54.815	ENSPANG00000000443	RNASEH1	97	53.543	Papio_anubis
ENSNBRG00000008739	rnaseh1	89	60.142	ENSPKIG00000003146	rnaseh1	99	60.854	Paramormyrops_kingsleyae
ENSNBRG00000008739	rnaseh1	87	55.515	ENSPSIG00000002937	RNASEH1	99	54.779	Pelodiscus_sinensis
ENSNBRG00000008739	rnaseh1	96	60.870	ENSPMGG00000017463	rnaseh1	99	62.034	Periophthalmus_magnuspinnatus
ENSNBRG00000008739	rnaseh1	87	54.478	ENSPEMG00000022465	-	89	54.478	Peromyscus_maniculatus_bairdii
ENSNBRG00000008739	rnaseh1	52	38.037	ENSPCIG00000026047	-	87	37.013	Phascolarctos_cinereus
ENSNBRG00000008739	rnaseh1	87	54.074	ENSPCIG00000023334	-	89	54.074	Phascolarctos_cinereus
ENSNBRG00000008739	rnaseh1	97	72.333	ENSPFOG00000002841	rnaseh1	100	72.000	Poecilia_formosa
ENSNBRG00000008739	rnaseh1	72	58.590	ENSPLAG00000021349	-	85	58.150	Poecilia_latipinna
ENSNBRG00000008739	rnaseh1	97	72.333	ENSPMEG00000016826	rnaseh1	100	72.000	Poecilia_mexicana
ENSNBRG00000008739	rnaseh1	97	71.569	ENSPREG00000012197	rnaseh1	100	71.242	Poecilia_reticulata
ENSNBRG00000008739	rnaseh1	87	46.667	ENSPPYG00000025873	RNASEH1	88	46.296	Pongo_abelii
ENSNBRG00000008739	rnaseh1	80	50.400	ENSPPYG00000008067	-	90	50.400	Pongo_abelii
ENSNBRG00000008739	rnaseh1	88	54.244	ENSPCAG00000002500	RNASEH1	90	54.244	Procavia_capensis
ENSNBRG00000008739	rnaseh1	87	48.529	ENSPCOG00000019444	RNASEH1	89	48.529	Propithecus_coquereli
ENSNBRG00000008739	rnaseh1	96	49.169	ENSPVAG00000002070	RNASEH1	99	49.169	Pteropus_vampyrus
ENSNBRG00000008739	rnaseh1	100	97.411	ENSPNYG00000001292	rnaseh1	100	97.411	Pundamilia_nyererei
ENSNBRG00000008739	rnaseh1	96	63.787	ENSPNAG00000022344	rnaseh1	99	62.126	Pygocentrus_nattereri
ENSNBRG00000008739	rnaseh1	94	50.859	ENSRNOG00000008584	Rnaseh1	97	52.921	Rattus_norvegicus
ENSNBRG00000008739	rnaseh1	87	55.185	ENSRBIG00000034222	RNASEH1	88	54.444	Rhinopithecus_bieti
ENSNBRG00000008739	rnaseh1	87	55.185	ENSRROG00000041761	RNASEH1	88	54.444	Rhinopithecus_roxellana
ENSNBRG00000008739	rnaseh1	89	52.000	YMR234W	-	87	52.000	Saccharomyces_cerevisiae
ENSNBRG00000008739	rnaseh1	87	54.745	ENSSBOG00000025411	RNASEH1	89	54.745	Saimiri_boliviensis_boliviensis
ENSNBRG00000008739	rnaseh1	96	51.495	ENSSHAG00000013051	RNASEH1	97	51.007	Sarcophilus_harrisii
ENSNBRG00000008739	rnaseh1	96	59.032	ENSSFOG00015002709	rnaseh1	100	57.860	Scleropages_formosus
ENSNBRG00000008739	rnaseh1	99	77.023	ENSSMAG00000007586	rnaseh1	100	76.699	Scophthalmus_maximus
ENSNBRG00000008739	rnaseh1	98	79.934	ENSSDUG00000008217	rnaseh1	99	80.488	Seriola_dumerili
ENSNBRG00000008739	rnaseh1	83	80.545	ENSSLDG00000000442	rnaseh1	95	80.545	Seriola_lalandi_dorsalis
ENSNBRG00000008739	rnaseh1	88	55.594	ENSSPUG00000006644	RNASEH1	93	55.245	Sphenodon_punctatus
ENSNBRG00000008739	rnaseh1	99	81.759	ENSSPAG00000009353	rnaseh1	100	81.759	Stegastes_partitus
ENSNBRG00000008739	rnaseh1	88	54.380	ENSSSCG00000025305	RNASEH1	90	54.380	Sus_scrofa
ENSNBRG00000008739	rnaseh1	88	55.245	ENSTGUG00000012980	RNASEH1	93	56.028	Taeniopygia_guttata
ENSNBRG00000008739	rnaseh1	95	73.737	ENSTRUG00000015774	rnaseh1	97	75.269	Takifugu_rubripes
ENSNBRG00000008739	rnaseh1	89	79.061	ENSTNIG00000010715	rnaseh1	97	79.061	Tetraodon_nigroviridis
ENSNBRG00000008739	rnaseh1	96	49.000	ENSTTRG00000001615	RNASEH1	99	49.667	Tursiops_truncatus
ENSNBRG00000008739	rnaseh1	68	53.052	ENSUMAG00000003941	RNASEH1	65	53.052	Ursus_maritimus
ENSNBRG00000008739	rnaseh1	95	45.151	ENSVPAG00000011589	RNASEH1	99	45.151	Vicugna_pacos
ENSNBRG00000008739	rnaseh1	94	52.492	ENSVVUG00000008633	RNASEH1	88	52.013	Vulpes_vulpes
ENSNBRG00000008739	rnaseh1	96	51.815	ENSXETG00000001212	rnaseh1	99	52.980	Xenopus_tropicalis
ENSNBRG00000008739	rnaseh1	66	51.899	ENSXETG00000030371	-	97	52.980	Xenopus_tropicalis
ENSNBRG00000008739	rnaseh1	96	73.913	ENSXMAG00000002357	rnaseh1	99	73.579	Xiphophorus_maculatus